KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:25 2014 Check: 00 .. Name: ENSP00000346442/1-499 Len: 1115 Check: 8412 Weight: 1.00 Name: ENSBTAP00000026270/1-552 Len: 1115 Check: 2098 Weight: 1.00 Name: ENSTTRP00000011939/1-550 Len: 1115 Check: 2712 Weight: 1.00 Name: bmy_04179T0/1-1031 Len: 1115 Check: 2174 Weight: 1.00 Name: BACU016354/1-485 Len: 1115 Check: 579 Weight: 1.00 // 1 50 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 MASAKKATEK RHNPVQSICR KIQAIQKREE STSXIQQIIK YQSSRFDSPQ BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 TNPKKDFEEV LKKMTTAPIP LPDPRSSSPE KVGAFTSRPQ RVSPRTPPIS BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 HLSSPENATY SLILTSSENI SRPRSQSSQN YTSLIPQIRK RELFSNKDLK BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 NCWSENDVSA LTLDFDSTSN QSSEFFTRQD SVVKKLSLNE EGWKQGTDDG BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 KEDVTYSNNR TCEEELLTSI FNACDTKCRV KMTTDITDSV SRSFEALXGD BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 MFKGVLEVPD LITCVADLHF NKQKLEEENN MLKLALESLE DANSQLSEDC BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 TELRLQIKRN GIQLNVSGEH KSVNSEGEKS LHCELILAQC AEHEDVSEVE BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 TLIDSSLQWV TNPEITVKEK WENKLTKQLE AITQLQEDAV NQEAILRKKV BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 QEASQWLEGA EEQVEDGHQA AHSAREEAKP LLRKLEEAIS DQRHLQTINT BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 ELVNTCQTLE QKTRKLKTTI ESLRKKLIKG QLHGLLFQSX LDEESPHYDP BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011939/1-550 ---------- ---------- ---------- ---------- ---------- bmy_04179T0/1-1031 LSCTDRIHQP LQEQLKQCCH KRYSGQEARI HQLPLTFKHT CWYTXLLDAL BACU016354/1-485 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000346442/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026270/1-552 ---------- LELTPFSCVA NLIHASHERP RYEEIEDGAL AVTERHRCPG ENSTTRP00000011939/1-550 ---------- LELTPFSCVA NRIHASRERP KYGEVEEGAL DVTGRHKCPG bmy_04179T0/1-1031 YLDSLTAIPR LELTPFSCVA NRIHASCERP KYGEIEDGAL DVTGRHKCPG BACU016354/1-485 ---------- LELTPFSCVA NRIHASCERP TYGEIEDGAL DVTGRH---- 601 650 ENSP00000346442/1-499 ---------- ------MNDD PSMEENGVER VCPESLLQSR EYSSLPLPRH ENSBTAP00000026270/1-552 PSAGPHPGTD LSGCIRMNND LSMEENGVEY LCSESQPQSR EYSTLPSPGH ENSTTRP00000011939/1-550 PTGGPHPGPD LSGCIRMNND LSMEENGVER LYSESLPQSR EYSTLPSPGH bmy_04179T0/1-1031 PTGGPHPGTD LSGCIRMNND LSMEENGVER LYSESLPQSR EYSTLPSPGH BACU016354/1-485 ---------- ---------- ---------- ---------K EYSTLPSPGH 651 700 ENSP00000346442/1-499 TSSTDGTITS SDPGLEILNM ASCDLDRNSL CKKEEDTRSA SPTIEAQGTS ENSBTAP00000026270/1-552 TSSTESTVTS SDSGSEILHM ASGDLDCKPL CEKEEDKRSA SAVTKIQGGS ENSTTRP00000011939/1-550 TSSTESTVTS SDSGSEILHM ASGVIDCKPL CEKEEDKRST SAVKKIKGGS bmy_04179T0/1-1031 TSSTESTVTS SDSGSEILHM ASGVIDCKPL CEKEEDKRSA SAVKKIKGGS BACU016354/1-485 TSSTESTVTS SDSGSEILHM ASGVTDCKPL CEKEEDKRSA SAVKKIKGGS 701 750 ENSP00000346442/1-499 PAHDNIAFQD STSKDKTILN LEAKEEPETI EEHKKEHASG DSVVSPLPVT ENSBTAP00000026270/1-552 PAPENIELQG SVSGEKSMLI QEAKKDPETI DEHRKECAAG GAALSSLP-- ENSTTRP00000011939/1-550 PAPENIALQG SVNEENIMSN QEAKGEPETI NEHRKECVAG GAAVSSLP-- bmy_04179T0/1-1031 PAPENIALQG SVSEEKIMSN QEAKGEPETI NEHRKECVAG GAAVSSLP-- BACU016354/1-485 PAPENIALQG SVSEEKIMSN QEAKGEPETI NEHRKECVAG GAAVSSLP-- 751 800 ENSP00000346442/1-499 TVKSVNLRQS ENTSANEKEV EAEFLRLSLG FKCDWFTLEK RVKLEERSRD ENSBTAP00000026270/1-552 -VKSVNFRQS DNTSANEKEV EAEFLRLSLG FKCDWFTLEK RVKLEERSRD ENSTTRP00000011939/1-550 -VKSVNFRQS DNTSANEKEV EAEFLRLSLG FKCDWFTLEK RVKLEERSRD bmy_04179T0/1-1031 -VKSVNFRQS DNTSANEKEV EAEFLRLSLG FKCDWFTLEK RVKLEERSRD BACU016354/1-485 -VKSVNFRQS DNTSANEKEV EAEFLRLSLG FKCDWFTLEK RVKLEERSRD 801 850 ENSP00000346442/1-499 LAEENLKKEI TNCLKLLESL TPLCEDDNQA QEIIKKLEKS IKFLSQCAAR ENSBTAP00000026270/1-552 LAEENLKKEI ANCLKLLESL TSLCEDDSQA QEIIKKLEKS ITFLSQCTTR ENSTTRP00000011939/1-550 LAEENLKKEI TNCLKLLESL TPLCEDDSQA QEIIKKLEKS VTFLSQCTAR bmy_04179T0/1-1031 LAEENLKKEI TNCLKLLESL TPLCEDDSQA QEIIKKLEKS ITFLSQCTAR BACU016354/1-485 LAEENLKKEI TNCLKLLESL TPLCEDDSQA QEIIKKLEKS ITFLSQCTAR 851 900 ENSP00000346442/1-499 VASRAEMLGA INQESRVSKA VEVMIQHVEN LKRMYAKEHA ELEELKQVLL ENSBTAP00000026270/1-552 VASRAEMLGA INQESRVSKA VEVMIQHVEN LKRMYAKEHA ELEELKQVLL ENSTTRP00000011939/1-550 VASRAEMLGA INQESRVSKA VEVMIQHVEN LKRMYAKEHA ELEELKQVLL bmy_04179T0/1-1031 VASRAEMLGA INQETRVSKA VEVMIQHVEN LKRMYAKEHA ELEELKQVLL BACU016354/1-485 VASRAEMLGA INQETRVSKA VEVMIQHVEN LKRMYAKEHA ELEELKQVLL 901 950 ENSP00000346442/1-499 QNERSFNPLE DDDDCQIKKR SASLNSKPSS LRRVTIASLP RNIGNAGMVA ENSBTAP00000026270/1-552 QNERSFNPLE DEDDCQTKKR SSSVNSKPSS LRRVTIASLP RNIGNAGMLA ENSTTRP00000011939/1-550 QNERTFNPLE DEGDCQIKKR SASLNSKXXX XXXXXXXXXX XXXXXXXXXX bmy_04179T0/1-1031 QNERTFNPLE DEGDCQIKKR SASLNSKPSS LRRVTIASLP RNIGNAGMVA BACU016354/1-485 QNERTFNPLE DEGDCQIKKR SASLNSKPSS LRRVTIASLP RNIGNAGM-- 951 1000 ENSP00000346442/1-499 GMENNDRFSR RSSSWRILGS KQSEHRPSLP RFISTYSWAD AEEEKCELKT ENSBTAP00000026270/1-552 GMENNDRFSR RSSSWRILGS KQSEHRPSLH RFISTYSWAD AEEEKCELKT ENSTTRP00000011939/1-550 XXXXXXXXXX XXXXXXXXGS KQSEH-PSLH RFIST-SWAD AEEEKCELKT bmy_04179T0/1-1031 GMENNDRFSR RSSSWRILGS KQSEHRPSLH RFISTYSWAD AEEEKCELKT BACU016354/1-485 ---------- ---------- --SEHRPSLH RFISTYSWAD AEEEKCELKT 1001 1050 ENSP00000346442/1-499 KDDSEPSGEE TVERTRKPSL SEKKNNPSKW DVSSVYDTIA SWATNLKSSI ENSBTAP00000026270/1-552 KDDLEPPEEE TVEKTRKPSL SEKKTNPSKW NVSSIYDTLA SWATNLKTSI ENSTTRP00000011939/1-550 KDDSEPPEEE TVERTRKPSL SEKKNNPSKW DVFSIYNTIA SWATNLKTSI bmy_04179T0/1-1031 KDDSEPPEEE TVERTRKPSL SEKKNNPSKW DVFS------ ---------- BACU016354/1-485 KDDSEPPEEE TVERTRKPSL SEKKNNPSKW DVFSIYNTIA SWATNLKTSI 1051 1100 ENSP00000346442/1-499 RKANKALWLS IAFIVLFAAL MSFLTGQLFQ KSVDAAPTQQ EDSWTSLEHI ENSBTAP00000026270/1-552 REANKVLWLS VAFIVLFAAL MSFFTGRFFQ KPVDAAPTQD GDPWMSLEHI ENSTTRP00000011939/1-550 REAGKALWLS VAFIVLFAAL MSFFTGRFFQ KSVDAAPTQD GDSWMSLEHI bmy_04179T0/1-1031 ---------- ---------- ---------- ---------- ---------- BACU016354/1-485 REANKALWLS VAFIVLFAAL MSFFTGRFFQ KSVDAAPTQD GDSWTSLEHI 1101 1150 ENSP00000346442/1-499 LWPFTRLRHN GPPPV ENSBTAP00000026270/1-552 LWPFTRLRHN GPPPV ENSTTRP00000011939/1-550 LWPFTRLQHN GPPPV bmy_04179T0/1-1031 ---------- ----- BACU016354/1-485 LWPFTRLQHN GPPPV