KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:31 2014 Check: 00 .. Name: bmy_18735T0/1-592 Len: 744 Check: 492 Weight: 1.00 Name: ENSP00000359778/1-690 Len: 744 Check: 9597 Weight: 1.00 Name: ENSBTAP00000026299/1-689 Len: 744 Check: 4003 Weight: 1.00 Name: BACU014800/1-744 Len: 744 Check: 5902 Weight: 1.00 Name: ENSTTRP00000012907/1-690 Len: 744 Check: 3629 Weight: 1.00 // 1 50 bmy_18735T0/1-592 ---------M EDAQGKAETV KNTKCP---- -KCTREDANG VCKAKI---- ENSP00000359778/1-690 MKRLPLLVVF STLLNCSYTQ NCTKTPCLPN AKCEIRNGIE ACYCNMGFSG ENSBTAP00000026299/1-689 MRLLPLLVGF STLLNCCCTQ NCTKTPCHPN AKCEIRNGRE GCYCNTGYSG BACU014800/1-744 MRLLPLLVGF STLLNCCYTQ NCTRTPCLPN AKCEIRNGAE GCYCNIGFSG ENSTTRP00000012907/1-690 MRLLPLLVGF STLLNCCYTQ NCTRTPCLPN AKCEIRNGAE GCYCNIGFSG 51 100 bmy_18735T0/1-592 -------DID ECSESFA-CG DHAMCKNVDG GYNCSCKEGY HTSTGNSQFT ENSP00000359778/1-690 NGVTICEDDN ECGNLTQSCG ENANCTNTEG SYYCMCVPGF RSSSNQDRFI ENSBTAP00000026299/1-689 NGVTICEDDN ECGNLTQSCG ENANCTNTQG SYYCMCAPGF RSSNNQDKFI BACU014800/1-744 NGVTICEDDN ECGNLTQSCG ENANCTNTEG SYYCMCAPGF RSSSNQDKFI ENSTTRP00000012907/1-690 NGVTICEDDN ECGNLTQSCG ENANCTNTEG SYYCMCAPGF RSSSNQDKFI 101 150 bmy_18735T0/1-592 PNDGTYCQ-- ---------- ---------- ---------- ---------- ENSP00000359778/1-690 TNDGTVCI-- ---------- ---------- ---------- ---------- ENSBTAP00000026299/1-689 TNDGTICV-- ---------- ---------- ---------- ---------- BACU014800/1-744 TNDGTICIDI DECSESFACG DHAMCKNVDG GYNCSCKEGY HTSTGNSQFT ENSTTRP00000012907/1-690 TNDGTICI-- ---------- ---------- ---------- ---------- 151 200 bmy_18735T0/1-592 --------EI VNPDCHSDNI CIAANINKTL TKIRHIEEPV ALLQEVYRNS ENSP00000359778/1-690 --------EN VNANCHLDNV CIAANINKTL TKIRSIKEPV ALLQEVYRNS ENSBTAP00000026299/1-689 --------EI VNPDCHLDNA CVAENINKTL TKIRHIEEPV ALLREVYRNS BACU014800/1-744 PNDGTYCQEI VNPDCHLDDI CIAANINKTL TKIRHIEEPV ALLQEVYRNS ENSTTRP00000012907/1-690 --------EI VNPDCHLDNI CIAANINKTL TKIRHIEEPV ALLQEVYRNS 201 250 bmy_18735T0/1-592 VKDLSPTDII TYIEILAESS PLLGYMNSTN SAKDTLSNST LTEFVKTVNN ENSP00000359778/1-690 VTDLSPTDII TYIEILAESS SLLGYKNNTI SAKDTLSNST LTEFVKTVNN ENSBTAP00000026299/1-689 LKDLSPMDII AYTEVLAESS PLLGYMNSSN SAKDTSSNST LTEFVKTLNN BACU014800/1-744 VKDLSPTDII TYIEILAESS PLLGYMNSTN SAKDTLSNST LTEFVKTVNN ENSTTRP00000012907/1-690 VKDLSPTDII TYIEILAESS PLLGYMNSTH SAKDTLSNST LTEFVKTVNN 251 300 bmy_18735T0/1-592 FVQKDTFIVW DKLSTNHRRT HLTKLIHAAE QVTLRLSQNF QKNTQFDTNS ENSP00000359778/1-690 FVQRDTFVVW DKLSVNHRRT HLTKLMHTVE QATLRISQSF QKTTEFDTNS ENSBTAP00000026299/1-689 FVQKDTFTVW DKLSTNQRIT HLTKLIHTAE QATLRISQNF QKTTQFDTNS BACU014800/1-744 FVQKDTFIVW DKLSTNHRRT HLTKLLHAAE QATLRLSQNF QKTTQFDTNS ENSTTRP00000012907/1-690 FVQKDTFIVW DKLSTNHRRT HLTKLIHAVE QATLRLSQNF QKTTQFDTNS 301 350 bmy_18735T0/1-592 SDIALKAFFF DSYHMKHIHP HMNMDGDNIK IFPNRKAAYD SNGSVAVAFL ENSP00000359778/1-690 TDIALKVFFF DSYNMKHIHP HMNMDGDYIN IFPKRKAAYD SNGNVAVAFV ENSBTAP00000026299/1-689 SDIALKAFFF DSHHIKYIHP HMNMDGDNIK IFPKRKTAYD SNGSVAVAFL BACU014800/1-744 SDIALKAFFF DSYHMKHIHP HMNMDGDNIK IFPNRKAAYD SNGSVAVAFL ENSTTRP00000012907/1-690 SDIALKVFFF DSYHMKHIHP HMNMDGDNIK IFPNRKAAYH SNGSVAVAFL 351 400 bmy_18735T0/1-592 YYKSIGPLFS SSDNILLEPQ SYDKAEEEGR VISSVISVSI SSNPPTLYEL ENSP00000359778/1-690 YYKSIGPLLS SSDNFLLKPQ NYDNSEEEER VISSVISVSM SSNPPTLYEL ENSBTAP00000026299/1-689 YYKSIGPLFS SSDN-LLEPQ SYDKAEEEGR VISSVISLSI SSNPPTLYEL BACU014800/1-744 YYKSIGPLFS SSDNILLEPQ SYDKAEEEGR VISSVISVSI SSNPPTLYEL ENSTTRP00000012907/1-690 YYKSIGPLFS SSDNILLEPQ SYDKAEEEGR VISSVISVSI SSNPPALYEL 401 450 bmy_18735T0/1-592 EKITFTLNHI KTTGKYRSQC AFWNYLPDTT NGSWSSEGCE LTYSNETHTS ENSP00000359778/1-690 EKITFTLSHR KVTDRYRSLC AFWNYSPDTM NGSWSSEGCE LTYSNETHTS ENSBTAP00000026299/1-689 EKVTFTLSHI KTTDKYKSQC AFWNYLPDTM NGSWSSEGCE LTHSNDTHTS BACU014800/1-744 EKITFTLNHI KTTGKYRSQC AFWNYLPDTM NGSWSSEGCE LTYSNETHTS ENSTTRP00000012907/1-690 EKITFTLNHI KTTDKYRSQC AFWNYLPNTM NGSWSSEGCE VTYSNETHTS 451 500 bmy_18735T0/1-592 CRCNHLTHFA ILMSSGSSIG IKDYNILTRI TQLGIIISLI CLALCIFTFW ENSP00000359778/1-690 CRCNHLTHFA ILMSSGPSIG IKDYNILTRI TQLGIIISLI CLAICIFTFW ENSBTAP00000026299/1-689 CRCNHLTHFA ILMSSGSSIG IKDYNILTRI TQLGIIISLI CLALCIFTFW BACU014800/1-744 CRCNHLTHFA ILMSSGSSIG IKDYNILTRI TQLGIIISLI CLAICIFTFW ENSTTRP00000012907/1-690 CSCNHLTHFA ILMSSGSSIG IKDYNILTRI TQLGIIISLI CLAICIFTFW 501 550 bmy_18735T0/1-592 FFSEIQSTRT TIHKNLCCSL FLAELVFLVG INTNTNKLFC SIIAGLLHYF ENSP00000359778/1-690 FFSEIQSTRT TIHKNLCCSL FLAELVFLVG INTNTNKLFC SIIAGLLHYF ENSBTAP00000026299/1-689 FFSEIQSTRT TIHKNLCCSL FLAELVFLVG INTNTNKLFC SIVAGLLHYF BACU014800/1-744 FFSEIQSTRT TIHKNLCCSL FLAELVFLVG INTNTNKLFC SIIAGLLHYF ENSTTRP00000012907/1-690 FFSEIQSTRT TIHKNLCCSL FLAELVFLVG INTNTNKLFC SIIAGLLHYF 551 600 bmy_18735T0/1-592 FLAAFAWMCI EGIHLYLIVV GVIYNKGFLH KNFYIFGYLS PAVVVGFSAS ENSP00000359778/1-690 FLAAFAWMCI EGIHLYLIVV GVIYNKGFLH KNFYIFGYLS PAVVVGFSAA ENSBTAP00000026299/1-689 FLAAFAWMCI EGIHLYLIVV GVIYNKGFLH KNFYIFGYLS PAVVVGFSAS BACU014800/1-744 FLAAFAWMCI EGIHLYLIVV GVIYNKGFLH KNFYIFGYVS PAVVVGFSAS ENSTTRP00000012907/1-690 FLAAFAWMCI EGIHLYLIVV GVIYNKGFLH KNFYIFGYLS PAVVVGFSAS 601 650 bmy_18735T0/1-592 LGYRYYGTTK VCWLSTENNF IWSFIGPACL IILVNLLAFG VIIYKVFRHT ENSP00000359778/1-690 LGYRYYGTTK VCWLSTENNF IWSFIGPACL IILVNLLAFG VIIYKVFRHT ENSBTAP00000026299/1-689 LGYRYYGTTK VCWLSTENNF IWSFIGPACL IILVNLLAFG VIIYKVFRHT BACU014800/1-744 LGYRYYGATK VCWLSTENNF IWSFIGPACL IILVNLLAFG VIIYKVFRHT ENSTTRP00000012907/1-690 LGYRYYGTTK VCWLSTENNF IWSFIGPACL IILVNLLAFG VIIYKVFRHT 651 700 bmy_18735T0/1-592 AGLKPEVSCY ENIRLTSE-- ---------- ---------- ---------- ENSP00000359778/1-690 AGLKPEVSCF ENIRSCARGA LALLFLLGTT WIFGVLHVVH ASVVTAYLFT ENSBTAP00000026299/1-689 AGLKPEVSCY ENIRSCARGA LALLFLLGTT WIFGVLHVVH ASVVTAYLFT BACU014800/1-744 AGLKPEVSCY ENIRSCARGA LALLFLLGTT WIFGVLHVVH ASVVTAYLFT ENSTTRP00000012907/1-690 AGLKPEVSCC ENIRSCARGA LALLFLLGTT WIFGVLHVVH ASVVTAYLFT 701 750 bmy_18735T0/1-592 ---------- ---------- ---------- ---------- ---- ENSP00000359778/1-690 VSNAFQGMFI FLFLCVLSRK IQEEYYRLFK NVPCCFGCLR ---- ENSBTAP00000026299/1-689 VSNAFQGMFI FLFLCILSRK IQEEYYRLFK NVPCCFGCLR ---- BACU014800/1-744 ISNAFQGMFI FLFLCVLSRK IQEEYYRLFK NVPCCFGCLR LTSE ENSTTRP00000012907/1-690 VSNAFQGMFI FLFLCVLSRK IQEEYYRLFK NVPCCFGCLR ----