KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:28:33 2014 Check: 00 .. Name: ENSP00000302079/1-482 Len: 534 Check: 8108 Weight: 1.00 Name: ENSBTAP00000026308/1-481 Len: 534 Check: 4323 Weight: 1.00 Name: bmy_05551T0/1-533 Len: 534 Check: 1792 Weight: 1.00 Name: BACU017028/1-458 Len: 534 Check: 1088 Weight: 1.00 // 1 50 ENSP00000302079/1-482 ---------- ---------- ---------- ---------- --------MA ENSBTAP00000026308/1-481 ---------- ---------- ---------- ---------- --------ME bmy_05551T0/1-533 MATQPDPLPY NTFLSQSFEN GTVEIVCHTF SVYSGYLFGS FARVNLLAME BACU017028/1-458 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000302079/1-482 SFSAETNSTD LLSQPWNEPP VILSMVILSL TFLLGLPGNG LVLWVAGLKM ENSBTAP00000026308/1-481 SFSAETNSTD LHSQPWDEPH IILSMVILSI TFLLGLPGNG LVLWVAGLKM bmy_05551T0/1-533 SFSAETNSTD LPSQPWDEPQ VILSMVILSF TFLLGLPGNG LVLWVAGLKM BACU017028/1-458 ---------- ---------- ----MVILCF TFLLGLPGNG LVLWVAGLKM 101 150 ENSP00000302079/1-482 QRTVNTIWFL HLTLADLLCC LSLPFSLAHL ALQGQWPYGR FLCKLIPSII ENSBTAP00000026308/1-481 QRTVNTVWFL HLTLADFICC LSLPFSLVHL VLQGHWPYGW FLCKLIPSII bmy_05551T0/1-533 QRSVSTVWFL HLTLADFLCC LSLPFSLVHL ALQGHWPYGW FLCKLIPSII BACU017028/1-458 QRSVSTVWFL HLTLADFLCC LSLPFSLVHL ALQGHWPYGW FLCKLIPSII 151 200 ENSP00000302079/1-482 VLNMFASVFL LTAISLDRCL VVFKPIWCQN HRNVGMACSI CGCIWVVAFV ENSBTAP00000026308/1-481 ILNMFASVFL LTTISLDRCL LVLRPIWCQN HRNVGTACTI CGCIWVVALV bmy_05551T0/1-533 VLNMFASVFL LTAISLDRCL LVLKPIWCQN HRNVGTAFTI CGCIWVVAFV BACU017028/1-458 VLNMFASFFL LTAISLDRCL LVLKPIWCQN HRNVGTAFTI CGCIWVVAFV 201 250 ENSP00000302079/1-482 MCIPVFVYRE IFTTDNHNRC GYKFGLSSSL DYPDFYGDPL ENRSLEN-IV ENSBTAP00000026308/1-481 MCIPVFVYRE TFTIDNQSMC SYNFGHYGSL DYPDFTYDLL ENGSFDN--- bmy_05551T0/1-533 MCIPVFIYRE TFTIDNHSMC GYNFGLYRSL DYSDFNFDLL ENGSLDNSIV BACU017028/1-458 MCIPVFIYRE TFTIDNQSMC GYNFGLYRSL DYSDFNFDLL ENGSLDNSIV 251 300 ENSP00000302079/1-482 QPPGEM-NDR LDPSSFQTND HPWTVPTVFQ PQTFQRPSAD SLPRGSARLT ENSBTAP00000026308/1-481 YPPGEM-DDR LDSFSSQTKD RPWAATTGLH SQEFQRTSRD SLPMNSARLS bmy_05551T0/1-533 ELPEEMDDDR LDSFSQQTND CPWAATAGLR SQIFQRTSGH SLPTDSARLS BACU017028/1-458 ELPEEM-DDR FDSFSQQTND CPWAATAGLC SQIFQRTSGH SLPTDSARLS 301 350 ENSP00000302079/1-482 SQNLYSNVFK PADVVSPKIP SGFPIEDHET SPLDNSDAFL STHLKLFPSA ENSBTAP00000026308/1-481 VQQPHYDLFQ SADKVSATLS SDFPIEDHRT HPLENSNSFL PADLEFFSNA bmy_05551T0/1-533 VQHPYYNVFK PADEVSATTP SDFPIEDHRT NPLENSDAFL PADLELFSSA BACU017028/1-458 VQHPYYKVFK PADEVSATIP SDFPIEDHRT NPLENSDAFL LADLELFSSA 351 400 ENSP00000302079/1-482 SSNSFYESEL PQGFQDYYNL GQFTDDDQVP TPLVAITITR LVVGFLLPSV ENSBTAP00000026308/1-481 SSDLLYTSEL SQGFQDDYF- GQFAYDHQVP TPQVAITISR LVVGFLLPFI bmy_05551T0/1-533 SGNSSYTLEL LEDFQDDDS- GQFAYGHQVP TPQVAITITR LVLGFLLPFI BACU017028/1-458 SGNSSYTWEL LEDFQDDDS- GQFAYGHQVP TPQVAITITR LVLGFLLPFI 401 450 ENSP00000302079/1-482 IMIACYSFIV FRMQRGRFAK SQSKTFRVAV VVVAVFLVCW TPYHIFGVLS ENSBTAP00000026308/1-481 IMVACYSLII LKMRRSRFTK SRSKLLRVAM VVVVVFLVCW APYHIVGVLL bmy_05551T0/1-533 LMVACYSLIV FRMRRSRFTK SRSKTLRVAM VVVAVFLVCW APYHIVGALL BACU017028/1-458 LMVACYSLII FRMRRRRFTK SRSKTLRVAM VVVAVFLVCW APYHIVGALL 451 500 ENSP00000302079/1-482 LLTDPETPLG KTLMSWDHVC IALASANSCF NPFLYALLGK DFRKKARQSI ENSBTAP00000026308/1-481 LFTDPDTPSG ESLLSWDHVS LALASANSCF NPFLYALLGK DFRRKARQSM bmy_05551T0/1-533 LFIDPETPFG EALLSWDHVS LALASANSCF NPFLYALLGK DFRKKARQSM BACU017028/1-458 LFIDPETPFG EALLSWDHVS LALASANSCF NPFLYALLGK DFRKKARQSM 501 550 ENSP00000302079/1-482 QGILEAAFSE ELTRSTHCPS NNVISERN-- STTV ENSBTAP00000026308/1-481 QGILEAAFSE DVTHSTSCPQ NKTSFERNSI STVV bmy_05551T0/1-533 QGILEAAFSE DLTHSTSCPP NKVSLEKNSI STVV BACU017028/1-458 QGILEAAFSE DLTHSTSCPP NKVSLEKNSI STVV