KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:38 2014 Check: 00 .. Name: ENSP00000307292/1-261 Len: 345 Check: 2349 Weight: 1.00 Name: ENSBTAP00000026323/1-260 Len: 345 Check: 7832 Weight: 1.00 Name: ENSTTRP00000013491/1-262 Len: 345 Check: 2389 Weight: 1.00 Name: bmy_13087T0/1-343 Len: 345 Check: 7904 Weight: 1.00 Name: BACU004498/1-263 Len: 345 Check: 4286 Weight: 1.00 // 1 50 ENSP00000307292/1-261 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026323/1-260 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013491/1-262 ---------- ---------- ---------- ---------- ---------- bmy_13087T0/1-343 GSRANLLPRG SPGRGGRKGE RFRRTPPPTS RPPAFPPAAR EGQPRLPESR BACU004498/1-263 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000307292/1-261 ---------- ---------- ---------- MRESALERGP VPEAPAGGPV ENSBTAP00000026323/1-260 ---------- ---------- ---------- MGESALESGP VPGAPAGGPV ENSTTRP00000013491/1-262 ---------- ---------- ---------- MGESALEPGP VPGAPARGPV bmy_13087T0/1-343 PELGRSRRRR PQPRAQPAAS GRARAGQSWS MGKSALEPGP VPGAPAGGPV BACU004498/1-263 ---------- ---------- ---------- MGESALEPGP VPGAPAGGPV 101 150 ENSP00000307292/1-261 HAVTVVTLLE KLASMLETLR ERQGGLARRQ GGLAGSVRRI QSGLGALSRS ENSBTAP00000026323/1-260 HAVTVVTLLE KLATMLETLR ERQGGLAQRQ GGLAGSVRRI QSNLGALSRS ENSTTRP00000013491/1-262 HAVTVVTLLE KLATMLEALR ERQGGLAQRQ GGLAGSVRRI QSRLGALSRS bmy_13087T0/1-343 HAVTVVTLLE KLATMLEALR ERQGGLAQRQ GGLAGSVRRI QSRLGALSRS BACU004498/1-263 HAVTVVTLLQ KLATMLEALR ERQGGLAQRQ GGLAGSVRRI QSRLGALSRS 151 200 ENSP00000307292/1-261 HDTTSNTLAQ LLAKAERVSS HANAAQERAV RRAAQVQRLE ANHGLLVARG ENSBTAP00000026323/1-260 HDTTSNTLAQ LLAKAERVGS HADAAQERAV RRAAQVQRLE ANHGLLVARG ENSTTRP00000013491/1-262 HDTTSNALAQ LLAKAERVGS HADAAQERAV RRAAQVQRLE ANHGLLVARG bmy_13087T0/1-343 HDTTSNALAQ LLAKAERVGS HADAAQERAV RRAAQVQRLE ANHGLLVARG BACU004498/1-263 HDTTSNALAQ LLAKAERVGS HADAAQERAV RRAAQVQRLE ANHGLLVARG 201 250 ENSP00000307292/1-261 KLHVLLFKEE GEVPASAFQK APEPLGPADQ S-ELGPEQLE AEVGESSD-E ENSBTAP00000026323/1-260 KLHVLLFKEE AEIPAKAFQK APEPLGPV-- --ELGPQLPE AEAEESSDEE ENSTTRP00000013491/1-262 KLHVLLFKEE AEIPAKAFQK APEPLGPADQ A-EPGPQQPE GEGGESSDEE bmy_13087T0/1-343 KLHVLLFKEE AEIPAKAFQK APEPLGPADQ AAEPGPQQPE GEGGESSDEE BACU004498/1-263 KLHVLLFKEE AEIPAKAFQK APEPLGPADQ AAEPGPQQPE GEGGESSDEE 251 300 ENSP00000307292/1-261 EPVESRAQRL RRTGLQKVQS LRRALSGRKG PAAPPPTPVK PPRLGPGRSA ENSBTAP00000026323/1-260 EPVESRARRL RRTGLEKVQS LRRALSGRKG HAAPTPTPVK PPRLGPGRSA ENSTTRP00000013491/1-262 EPVESRALRL RRAGL--VHS LRRAFSGRKG PAAPSPTPVK PPRLGPGRST bmy_13087T0/1-343 EPVESRALRL RHAGL--VHS LRRAFSGRKG PAAPTHTPVK PPRLGPGRSP BACU004498/1-263 EPVESRALRL RRAGL--VHS LRRAFSGRKG PAAPTPTPVK PPRLGPGRSP 301 350 ENSP00000307292/1-261 EAQPEAQPAL EPTLEPEPPQ DTEEDPGRPG AAE--EALLQ MESVA ENSBTAP00000026323/1-260 EGQWEAQPAL ESKLEPEPPQ DTEEDPGRPG AAE-AAAVLQ VESAA ENSTTRP00000013491/1-262 EGQPEAQPES ESKQEPEPPQ DTEEDPGRPR AAKAAAAVLQ IESAA bmy_13087T0/1-343 EGQPEAQPES ESKQEPEPPQ DTEEDPGRPG AAEAAAAVLQ IESAA BACU004498/1-263 EGQPEAQPES ESKQEPEPPQ ETEEDPGRPG AAEAAAAVLQ IESAA