KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:38 2014 Check: 00 .. Name: bmy_09854T0/1-420 Len: 512 Check: 7054 Weight: 1.00 Name: ENSTTRP00000015133/1-329 Len: 512 Check: 6765 Weight: 1.00 Name: ENSBTAP00000026327/1-328 Len: 512 Check: 882 Weight: 1.00 Name: ENSP00000443988/1-328 Len: 512 Check: 799 Weight: 1.00 Name: BACU013597/1-395 Len: 512 Check: 8002 Weight: 1.00 // 1 50 bmy_09854T0/1-420 MAEPGGPRAA PDPEVAAGAR PPSPRASARG GAWRRQGRGS RGSGSSSQRL ENSTTRP00000015133/1-329 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026327/1-328 ---------- ---------- ---------- ---------- ---------- ENSP00000443988/1-328 ---------- ---------- ---------- ---------- ---------- BACU013597/1-395 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_09854T0/1-420 PRALLRGRGV RRAGGRGSRV ARSTTGRGDM SAAGLLAPAP APAGAPPAPE ENSTTRP00000015133/1-329 ---------- ---------- ---------M SAAGLLAPAP APAGAPPAPE ENSBTAP00000026327/1-328 ---------- ---------- ---------M SAAALLAPAP APAGAPPAPE ENSP00000443988/1-328 ---------- ---------- ---------M SAAGLLAPAP AQAGAPPAPE BACU013597/1-395 ---------- ---------- ---------M SAAGLLAPAP APAGAPPAPE 101 150 bmy_09854T0/1-420 YYPEEDEELE SAEDDERSCR GRESDED--- ---------- ---------- ENSTTRP00000015133/1-329 YYPEEDEELE SAEDDERSCR GRESDED--- ---------- ---------- ENSBTAP00000026327/1-328 YYPEEDEELE SAEDDERSCR GRESDED--- ---------- ---------- ENSP00000443988/1-328 YYPEEDEELE SAEDDERSCR GRESDED--- ---------- ---------- BACU013597/1-395 YYPEEDEELE SAEDDERSCR GRESDEDTED ASETDHWGRW EGPPGGARLP 151 200 bmy_09854T0/1-420 ---------- ---------- ---------- ---TEDASET DLAKHDEEDY ENSTTRP00000015133/1-329 ---------- ---------- ---------- ---TEDASET DLAKHDEEDY ENSBTAP00000026327/1-328 ---------- ---------- ---------- ---TEDASET DLAKHDEEDF ENSP00000443988/1-328 ---------- ---------- ---------- ---TEDASET DLAKHDEEDY BACU013597/1-395 EVIPTGAVEG EALRTLYPTV MRRRALRSCC QSYTEDASET DLAKHDEEDY 201 250 bmy_09854T0/1-420 VEMKEQMYQD KLASLKRQLQ QLQEGTLQEY QKRMKKLDQQ YKERIRNAE- ENSTTRP00000015133/1-329 VEMKEQMYQD KLASLKRQLQ QLQEGTLQEY QKRMKKLDQQ YKERIRNADT ENSBTAP00000026327/1-328 VEMKEQMYQD KLASLKRQLQ QLQEGTLQEY QKRMKKLDQQ YKERIRNAE- ENSP00000443988/1-328 VEMKEQMYQD KLASLKRQLQ QLQEGTLQEY QKRMKKLDQQ YKERIRNAE- BACU013597/1-395 VEMKEQMYQD KLASLKRQLQ QLQEGTLQEY QKRMKKLDQQ YKERIRNAE- 251 300 bmy_09854T0/1-420 LFLQLETEQV ERNYIKEKKA AVKEFEDKKV ELKENLIAEL EEKKKMIENE ENSTTRP00000015133/1-329 LFLKAQTEQV ERNYIKEKKA AVKEFEDKKV ELKENLIAEL EEKKKMIENE ENSBTAP00000026327/1-328 LFLQLETEQV ERNYIKEKKA AVKEFEDKKV ELKENLIAEL EEKKKMIENE ENSP00000443988/1-328 LFLQLETEQV ERNYIKEKKA AVKEFEDKKV ELKENLIAEL EEKKKMIENE BACU013597/1-395 LFLQLETEQV ERNYIKEKKA AVKEFEDKKV ELKENLIAEL EEKKKMIENE 301 350 bmy_09854T0/1-420 KLTMELTGDS MEVKPIMTRK LRRRPNDP-- ---------- --LNYLLTDE ENSTTRP00000015133/1-329 KLTMELTGDS MEVKPIMTRK LRRRPNDPVP IPDKRRKPAP XXXXXXXXXX ENSBTAP00000026327/1-328 KLTMELTGDS MEVKPIMTRK LRRRPNDPVP IPDKRRKPAP AQLNYLLTDE ENSP00000443988/1-328 KLTMELTGDS MEVKPIMTRK LRRRPNDPVP IPDKRRKPAP AQLNYLLTDE BACU013597/1-395 KLTMELTGDS MEVKPIMTRK LRRRPNDPVP IPDKRRKPAP AQLNYLLTDE 351 400 bmy_09854T0/1-420 QIMEDLRTLN KLKSPKRPGF ILRETFPSVY ASGISLKYTC ISENETRRVL ENSTTRP00000015133/1-329 XXXXXXXXXX XXXXXXXXX- ---------- ---------- ---------- ENSBTAP00000026327/1-328 QIMEDLRTLN KLKSPKRPA- ---------- ---------- ---------- ENSP00000443988/1-328 QIMEDLRTLN KLKSPKRPA- ---------- ---------- ---------- BACU013597/1-395 QIMEDLRTLN KLKSPKRPA- ---------- ---------- ---------- 401 450 bmy_09854T0/1-420 QPSPSSPEHV PATPAESPAQ RFEARIEDGK LYYDKRWY-- ---------- ENSTTRP00000015133/1-329 --SPSSPEHL PATPAESPAQ RFEARIEDGK LYYDKRWYHK SQAIYLESKD ENSBTAP00000026327/1-328 --SPSSPEHL PTTPAESPAQ RFEARIEDGK LYYDKRWYHK SQAIYLESKD ENSP00000443988/1-328 --SPSSPEHL PATPAESPAQ RFEARIEDGK LYYDKRWYHK SQAIYLESKD BACU013597/1-395 --SPSSPEHL PATPAESPAQ RFEARIEDGK LYYDKRWYHK SQAIYLESKD 451 500 bmy_09854T0/1-420 ---------V LGKHRLLVRI SKEPFGKRAG AVYMVISEHG CCLTKGGGAF ENSTTRP00000015133/1-329 NQKLSCVISS VGANEIWVRK TSDSTKMR-- -IYLGQLQRG LFVIRRRSAA ENSBTAP00000026327/1-328 NQKLSCVISS VGANEIWVRK TSDSTKMR-- -IYLGQLQRG LFVIRRRSAA ENSP00000443988/1-328 NQKLSCVISS VGANEIWVRK TSDSTKMR-- -IYLGQLQRG LFVIRRRSAA BACU013597/1-395 NQKLSCVISS VGANEIWVRK TSDSTKMR-- -IYLGQLQRG LFVIRRRRTP 501 550 bmy_09854T0/1-420 RSCQESWIDT AF ENSTTRP00000015133/1-329 ---------- -- ENSBTAP00000026327/1-328 ---------- -- ENSP00000443988/1-328 ---------- -- BACU013597/1-395 SPSRECQQNG S-