KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:39 2014 Check: 00 .. Name: ENSTTRP00000011712/1-1018 Len: 1066 Check: 5983 Weight: 1.00 Name: bmy_11524T0/1-1025 Len: 1066 Check: 7345 Weight: 1.00 Name: BACU012471/1-1019 Len: 1066 Check: 9255 Weight: 1.00 Name: ENSBTAP00000026332/1-1019 Len: 1066 Check: 9669 Weight: 1.00 Name: ENSP00000265986/1-1019 Len: 1066 Check: 9693 Weight: 1.00 // 1 50 ENSTTRP00000011712/1-1018 MRYRLTWLLH SALSSTFRSV LGAHLPPPER LCGXXXXXXX XXXXXXXXXX bmy_11524T0/1-1025 ---------- ---------- ---------- ---------- -MNNPVIKRI BACU012471/1-1019 MQYRLTWLLH PALSSTFRSV LGARLPRPER LCGFQKKTYS KMNNPAIKRI ENSBTAP00000026332/1-1019 MRYRLAWLLH SALPSTFRSV LGARLPPSER LCGFQKKTYS KMNNPAIKRI ENSP00000265986/1-1019 MRYRLAWLLH PALPSTFRSV LGARLPPPER LCGFQKKTYS KMNNPAIKRI 51 100 ENSTTRP00000011712/1-1018 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXSAAL DVHIGSLSDP bmy_11524T0/1-1025 GNHIIKSPED KREYRGLELA NGIKVLLISD PTTDKSSAAL DVHIGSLSDP BACU012471/1-1019 GNHIIKSPED KREYRGLELA NGIKVLLISD PTTDKSSAAL DVHIGSLSDP ENSBTAP00000026332/1-1019 GHHIIKSHED KREYRGLELA NGIKVLLVSD PTTDKSSAAL DVHIGSLSDP ENSP00000265986/1-1019 GNHITKSPED KREYRGLELA NGIKVLLISD PTTDKSSAAL DVHIGSLSDP 101 150 ENSTTRP00000011712/1-1018 ANIAGLSHFC EHMLFLGTKK YPKENEYSQF LSEHAGSSNA FTSGEHTNYY bmy_11524T0/1-1025 ANIAGLSHFC EHMLFLGTKK YPKENEYSQF LSEHAGSSNA FTSGEHTNYY BACU012471/1-1019 ANIAGLSHFC EHMLFLGTKK YPKENEYSQF LSEHAGSSNA FTSGEHTNYY ENSBTAP00000026332/1-1019 PNIAGLSHFC EHMLFLGTKK YPKENEYSQF LSEHAGSSNA FTSGEHTNYY ENSP00000265986/1-1019 PNIAGLSHFC EHMLFLGTKK YPKENEYSQF LSEHAGSSNA FTSGEHTNYY 151 200 ENSTTRP00000011712/1-1018 FDVSHEHLEG ALDRFAQFFL CPLFDESCKD REVNAVDSEH EKNVMNDAWR bmy_11524T0/1-1025 FDVSHEHLEG ALDRFAQFFL CPLFDESCKD REVNAVDSEH EKNVMNDAWR BACU012471/1-1019 FDVSHEHLEG ALDRFAQFFL CPLFDESCKD REVNAVDSEH EKNVMNDAWR ENSBTAP00000026332/1-1019 FDVSHEHLEG ALDRFAQFFL CPLFDESCKD REVNAVDSEH EKNVMNDAWR ENSP00000265986/1-1019 FDVSHEHLEG ALDRFAQFFL CPLFDESCKD REVNAVDSEH EKNVMNDAWR 201 250 ENSTTRP00000011712/1-1018 LFQLEKATGD PKHPFSKFGT GNKYTLETRP NQEGIDVRQE LLKFHSTYYS bmy_11524T0/1-1025 LFQLEKATGN PKHPFSKFGT GNKHTLETRP NQEGIDVRQE LLKFHSTYYS BACU012471/1-1019 LFQLEKATGN PKHPFSKFGT GNKYTLETRP NQEGIDVRQE LLKFHSTYYS ENSBTAP00000026332/1-1019 LFQLEKATGN PKHPFSKFGT GNKYTLETRP NQEGIDVRQE LLKFHSTYYS ENSP00000265986/1-1019 LFQLEKATGN PKHPFSKFGT GNKYTLETRP NQEGIDVRQE LLKFHSAYYS 251 300 ENSTTRP00000011712/1-1018 SNLMAICVLG RESLDDLTDL VVKLFSEVEN KNVPLPEFPE HPFQEEHLKQ bmy_11524T0/1-1025 SNLMAICVLG RESLDDLTDL VVKLFSEVEN KNVPLPEFPE HPFQEEHLKQ BACU012471/1-1019 SNLMAICVLG RESLDDLTDL VVKLFSEVEN KNVPLPEFPE HPFQEEHLKQ ENSBTAP00000026332/1-1019 SNLMAICVLG RESLDDLTNL VVKLFSEVEN KNVPLPEFPE HPFQEEHLKQ ENSP00000265986/1-1019 SNLMAVCVLG RESLDDLTNL VVKLFSEVEN KNVPLPEFPE HPFQEEHLKQ 301 350 ENSTTRP00000011712/1-1018 LYKIVPIKDI RNLYVTFPIP DLQKYYKSNP GHYLGHLIGH EGPGSLLSEL bmy_11524T0/1-1025 LYKIVPIKDI RNLYVTFPIP DLQKYYKSNP GHYLGHLIGH EGPGSLLSEL BACU012471/1-1019 LYKIVPIKDI RNLYVTFPIP DLQKYYKSNP GHYLGHLIGH EGPGSLLSEL ENSBTAP00000026332/1-1019 LYKIVPIKDI RNLYVTFPIP DLQKYYKSNP GHYLGHLIGH EGPGSLLSEL ENSP00000265986/1-1019 LYKIVPIKDI RNLYVTFPIP DLQKYYKSNP GHYLGHLIGH EGPGSLLSEL 351 400 ENSTTRP00000011712/1-1018 KSKGWVNTLV GGQKEGARGF MFFIINVDLT EEGLLHVEDI ILHMFQYIQK bmy_11524T0/1-1025 KSKGWVNTLV GGQKEGARGF MFFIINVDLT EEGLLHVEDI ILHMFQYIQK BACU012471/1-1019 KSKGWVNTLV GGQKEGARGF MFFIINVDLT EEGLLHVEDI ILHMFQYIQK ENSBTAP00000026332/1-1019 KSKGWVNTLV GGQKEGARGF MFFIINVDLT EEGLLHVEDI ILHMFQYIQK ENSP00000265986/1-1019 KSKGWVNTLV GGQKEGARGF MFFIINVDLT EEGLLHVEDI ILHMFQYIQK 401 450 ENSTTRP00000011712/1-1018 LRAEGPQEWV FQECKDLNAV AFRFKDKERP RGYTSKIA-I LHYYPLEEVL bmy_11524T0/1-1025 LRAEGPQEWV FQECKDLNAV GFRFKDKERP RGYTSKIAGI LHYYPLEEVL BACU012471/1-1019 LRAEGPQEWV FQECKDLNAV AFRFKDKERP RGYTSKIAGI LHYYPLEEVL ENSBTAP00000026332/1-1019 LRAEGPQEWV FQECKDLNAV AFRFKDKERP RGYTSKIAGI LHYYPLEEVL ENSP00000265986/1-1019 LRAEGPQEWV FQECKDLNAV AFRFKDKERP RGYTSKIAGI LHYYPLEEVL 451 500 ENSTTRP00000011712/1-1018 TAEYLLEEFR PDLIEMVLDK LRPENVRVAI VSKSFEGKTD CTEEWYGTQY bmy_11524T0/1-1025 TAEYLLEEFR PDLIEMVLDK LRPENVRVAI VSKSFEGKTD HTEEWYGTQY BACU012471/1-1019 TAEYLLEEFR PDLIEMVLDK LRPENVRVAI VSKSFEGKTD RTEEWYGTQY ENSBTAP00000026332/1-1019 TAEYLLEEFR PDLIEMVLDK LRPENVRVAI VSKSFEGKTD RTEEWYGTQY ENSP00000265986/1-1019 TAEYLLEEFR PDLIEMVLDK LRPENVRVAI VSKSFEGKTD RTEEWYGTQY 501 550 ENSTTRP00000011712/1-1018 KQEAIPDEVI KKWQNADLNG KFKLPTKNEF IPTNFEILSL EKEATPYPSL bmy_11524T0/1-1025 KQEAIPDEVI KKWQNADLNG KFKLPTKNEF IPANFEILSL EKEATPYPSL BACU012471/1-1019 KQEAVPDEVI KKWQNADLNG KFKLPTKNEF IPTDFEILSL EKEATPYPSL ENSBTAP00000026332/1-1019 KQEAIPDEVI KKWQNADLNG KFKLPMKNEF IPTNFEILSL EKEATPYPSL ENSP00000265986/1-1019 KQEAIPDEVI KKWQNADLNG KFKLPTKNEF IPTNFEILPL EKEATPYPAL 551 600 ENSTTRP00000011712/1-1018 IKDTAMSKLW FKQDDKFFLP KACLNFEFFS PFAYVDPLHC NMAYLYLELL bmy_11524T0/1-1025 IKDTAMSKLW FKQDDKFFLP KACLNFEFFS PFAYVDPLHC NMAYLYLELL BACU012471/1-1019 IKDTAMSKLW FKQDDKFFLP KACLNFEFFS PFAYVDPLHC NMAYLYLELL ENSBTAP00000026332/1-1019 IKDTAMSKLW FKQDDKFFLP KACLNFEFFS PFAYVDPLHC NMAYLYLELL ENSP00000265986/1-1019 IKDTAMSKLW FKQDDKFFLP KACLNFEFFS PFAYVDPLHC NMAYLYLELL 601 650 ENSTTRP00000011712/1-1018 KDSLNEYAYA AELAGLSYDL QNTIYG---- ---------- ---------- bmy_11524T0/1-1025 KDSLNEYAYA AELAGLSYDL QNTIYGIRYI YADPLHCNMT YLFIRLLKDD BACU012471/1-1019 KDSLNEYAYA AELAGLSYDL QNTIYG---- ---------- ---------- ENSBTAP00000026332/1-1019 KDSLNEYAYA AELAGLSYDL QNTIYG---- ---------- ---------- ENSP00000265986/1-1019 KDSLNEYAYA AELAGLSYDL QNTIYG---- ---------- ---------- 651 700 ENSTTRP00000011712/1-1018 ---------- ---------- ---MYLSVKG YNDKQPILLK KIIEKMATFE bmy_11524T0/1-1025 LKEYTYAARL SGLSYGIASG MNAILLSVKG YNDKQPILLK KIIEKMATFE BACU012471/1-1019 ---------- ---------- ---MYLSVKG YNDKQPILLK KIIEKMATFE ENSBTAP00000026332/1-1019 ---------- ---------- ---MYLSVKG YNDKQPILLK KIIEKMATFE ENSP00000265986/1-1019 ---------- ---------- ---MYLSVKG YNDKQPILLK KIIEKMATFE 701 750 ENSTTRP00000011712/1-1018 IDEKRFEIIK EAYMRSLNNF RAEQPHQHAM YYLRLLMTEV AWTKDELKEA bmy_11524T0/1-1025 IDEKRFEIIK EAYMRSLNNF RAEQPHQHAM YYLRLLMTEV AWTKDELKEA BACU012471/1-1019 IDEKRFEIIK EAYMRSLNNF RAEQPHQHAM YYLRLLMTEV AWTKDELKEA ENSBTAP00000026332/1-1019 IDEKRFEIIK EAYMRSLNNF RAEQPHQHAM YYLRLLMTEV AWTKDELKEA ENSP00000265986/1-1019 IDEKRFEIIK EAYMRSLNNF RAEQPHQHAM YYLRLLMTEV AWTKDELKEA 751 800 ENSTTRP00000011712/1-1018 LDDVTLPRLK AFIPQLLSRL HIEALLHGNI TKQAALGIMQ MVEDTLIEHA bmy_11524T0/1-1025 LDDVTLPRLK AFIPQLLSRL HIEALLHGNI TKQAALGIMQ MVEDTLIEHA BACU012471/1-1019 LDDVTLPRLK AFIPQLLSRL HIEALLHGNI TKQAALGIMQ MVEDTLIEHA ENSBTAP00000026332/1-1019 LDDVTLPRLK AFIPQLLSRL HIEALLHGNI TKQAALGIMQ MVEDTLIEHA ENSP00000265986/1-1019 LDDVTLPRLK AFIPQLLSRL HIEALLHGNI TKQAALGIMQ MVEDTLIEHA 801 850 ENSTTRP00000011712/1-1018 HTKPLLPSQL VRYREVQLPD RGWFVYQQRN EVHNNCGIEI YYQTDMQSTS bmy_11524T0/1-1025 HTKPLLPSQL VRYREVQLPD RGWFVYQQRN EVHNNCGIEI YYQTDMQSTS BACU012471/1-1019 HTKPLLPSQL VRYREVQLPD RGWFVYQQRN EVHNNCGIEI YYQTDMQSTS ENSBTAP00000026332/1-1019 HTKPLLPSQL VRYREVQLPD RGWFVYQQRN EVHNNCGIEI YYQTDMQSTS ENSP00000265986/1-1019 HTKPLLPSQL VRYREVQLPD RGWFVYQQRN EVHNNCGIEI YYQTDMQSTS 851 900 ENSTTRP00000011712/1-1018 ENMFLELFCQ IISEPCFNTL RTKEQLGYIV FSGPRRANGI QGLRFIIQSE bmy_11524T0/1-1025 ENMFLELFCQ IISEPCFNTL RTKEQLGYIV FSGPRRANGI QGLRFIIQSE BACU012471/1-1019 ENMFLELFCQ IISEPCFNTL RTKEQLGYIV FSGPRRANGI QGLRFIIQSE ENSBTAP00000026332/1-1019 ENMFLELFCQ IISEPCFNTL RTKEQLGYIV FSGPRRANGI QGLRFIIQSE ENSP00000265986/1-1019 ENMFLELFCQ IISEPCFNTL RTKEQLGYIV FSGPRRANGI QGLRFIIQSE 901 950 ENSTTRP00000011712/1-1018 KPPHYLESRV EAFLITMEKS IEDMTEEAFQ KHIQALAIRR LDKPKKLSAE bmy_11524T0/1-1025 KPPHYLESRV EAFLITMEKS IEDMTEEAFQ KHIQALAIRR LDKPKKLSAE BACU012471/1-1019 KPPHYLESRV EAFLITMEKS IEDMTEEAFQ KHIQALAIRR LDKPKKLSAE ENSBTAP00000026332/1-1019 KPPHYLESRV EAFLITMEKS IEDMTEEAFQ KHIQALAIRR LDKPKKLSAE ENSP00000265986/1-1019 KPPHYLESRV EAFLITMEKS IEDMTEEAFQ KHIQALAIRR LDKPKKLSAE 951 1000 ENSTTRP00000011712/1-1018 CAKYWGEIIS QQYNFDRDNT EVAYLKTLTK EDIIKFYKXX XXXXXXXXXX bmy_11524T0/1-1025 CAKYWGEIIS QQYNFDRDNI EVAYLKTLTK EDIIKFYKEM LAVDAPRRHK BACU012471/1-1019 CAKYWGEIIS QQYNFDRDNI EVAYLKTLTK EDIIKFYKEM LAVDAPRRHK ENSBTAP00000026332/1-1019 CAKYWGEIIS QQYNFDRDNI EVAYLKTLTK EDIIKFYKEM LAVDAPRRHK ENSP00000265986/1-1019 CAKYWGEIIS QQYNFDRDNT EVAYLKTLTK EDIIKFYKEM LAVDAPRRHK 1001 1050 ENSTTRP00000011712/1-1018 XXXXXXXXXX XXXPVVGEFP CQNDINLSQA PALPQPEVIQ NMTEFKRGLP bmy_11524T0/1-1025 VSVHVLAREM DSCPVVGEFP CQNDINLSQA PALPQPEVIQ NMTEFKRGLP BACU012471/1-1019 VSVHVLAREM DSCPVVGEFP CQNDINLSQA PALPQPEVIQ NMTEFKRGLP ENSBTAP00000026332/1-1019 VSVHVLAREM DSCPVVGEFP CQNDINLSQA PALPQPEVIQ NMTEFKRGLP ENSP00000265986/1-1019 VSVHVLAREM DSCPVVGEFP CQNDINLSQA PALPQPEVIQ NMTEFKRGLP 1051 1100 ENSTTRP00000011712/1-1018 LFPLVKPHIN FMAAKL bmy_11524T0/1-1025 LFPLVKPHIN FMAAKL BACU012471/1-1019 LFPLVKPHIN FMAAKL ENSBTAP00000026332/1-1019 LFPLVKPHIN FMAAKL ENSP00000265986/1-1019 LFPLVKPHIN FMAAKL