KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:44 2014 Check: 00 .. Name: ENSP00000378757/1-509 Len: 513 Check: 4774 Weight: 1.00 Name: ENSBTAP00000026369/1-510 Len: 513 Check: 8967 Weight: 1.00 Name: BACU019265/1-513 Len: 513 Check: 1562 Weight: 1.00 Name: ENSTTRP00000006683/1-513 Len: 513 Check: 2007 Weight: 1.00 Name: bmy_06763T0/1-326 Len: 513 Check: 210 Weight: 1.00 // 1 50 ENSP00000378757/1-509 MELKKSPDGG WGWVIVFVSF LTQFLCYGSP LAVGVLYIEW LDAFGEGKGK ENSBTAP00000026369/1-510 MEFKKPPDGG WGWVIVVVSF FTQFLCYGSP LAVGVLYIEW LDAFGEGKGK BACU019265/1-513 MEFKKPPDGG WGWVIVLASL FTQFLCYGSP LAVGVLYIEW LDAFGEGKGK ENSTTRP00000006683/1-513 MEFKKPPDGG WGWVIVLASL FTQFLCYGSP LAVGVLYVEW LDAFGEGKGK bmy_06763T0/1-326 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000378757/1-509 TAWVGSLASG VGLLASPVCS LCVSSFGARP VTIFSGFMVA GGLMLSSFAP ENSBTAP00000026369/1-510 TAWIGSLASG VGLLASPVCS VCVSSFGARA VTIFSGFLVA GGLMLSSFAP BACU019265/1-513 TAWVGSLASG VGLLASPVCS LCVSSFGARA VTIFSGFMVA GGLMLSSFAP ENSTTRP00000006683/1-513 TAWVGSLASG VGLLASPVCS LCVSSFGARA VTIFSGFMVA GGLMLSSFAP bmy_06763T0/1-326 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000378757/1-509 NIYFLFFSYG IVVGLGCGLL YTATVTITCQ YFDDRRGLAL GLISTGSSVG ENSBTAP00000026369/1-510 NIYFLFFSYG IVVGLGCGLL YTATVTITCQ YFDSRRGLAL GLISTGSSVG BACU019265/1-513 NIYFLFFSYG IVVGLGCGLL YTATVTVTCQ YFDSRRGLAL GLISTGSSIG ENSTTRP00000006683/1-513 NIYFLFFSYG IVVGLGCGLL YTATVTITCQ YFDSRRGLAL GLISTGSSIG bmy_06763T0/1-326 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000378757/1-509 LFIYAALQRM LVEFYGLDGC LLIVGALALN ILACGSLMRP LQSSDCPLPK ENSBTAP00000026369/1-510 LFIYAALQRL LIEFYGLDGC LLIVGALALN ILACGSLMRP LQSSDFPLPE BACU019265/1-513 LFIYAALQRL LIEFYGLDGC LLIVGALALN ILACGSLMRP LQSSDCTLPE ENSTTRP00000006683/1-513 LFIYAALQRL LIEFYGLDGC LLIVGALALN ILACGSLMRP LQSSDCTLPE bmy_06763T0/1-326 ---------- ---------- ---------- -------MRP LQSSDCTLPE 201 250 ENSP00000378757/1-509 KIAPEDLPDK YSIYNEKGKN LEENINILDK SYSSEEKCRI TLANGDWKQD ENSBTAP00000026369/1-510 KTALENVPDR YSIYKEKEKD PEENINMLEK SYIGEETCKS TLANGDWKSE BACU019265/1-513 KIALENVPDR YSIYNEKEKN LEENINILEK TYRGEETCKS PLASGDWKPE ENSTTRP00000006683/1-513 KIALEKVPGR YSIYNEKEKN LEENINILEK TYRGEETCKS TLASGDWKPE bmy_06763T0/1-326 KIALENVPDR YSIYNEKEKN LEENINILEK TYRGEETCKS TLASGDWKPE 251 300 ENSP00000378757/1-509 SLLHKNPT-V THTKEPETYK KKVAEQTYFC KQLAKRKWQL YKNYCGETVA ENSBTAP00000026369/1-510 SLLHKNPTTM SRTKETETYK KKVAERTYFC KQLAKRKWQL YKNYCGETVA BACU019265/1-513 SLLHKNPTAM VHTKEAETYK KKVAERTYFC KQLAKRKWQL YKNYCEETGA ENSTTRP00000006683/1-513 SLLHKNPTTM AHTKETETYK KKVAERTYFC KQLAKRKWPL YKNYCEETVA bmy_06763T0/1-326 SLLHKNPTTM AHTKETETYK KKVAERTYFC KQLAKRKWQL YKNYCEETVA 301 350 ENSP00000378757/1-509 LFKNKVFSAL FIAILLFDIG GFPPSLLMED VARSSNVKEE EFIMPLISII ENSBTAP00000026369/1-510 LFKNKVFSAL FIAIFLFDIG GFPPSLLMED VARSSNVKEE EFIMPLISII BACU019265/1-513 LFKNKVFSAL FIAIFLFDIG GFPPSLLMED VARSSNVKEE EFPMPLISII ENSTTRP00000006683/1-513 LFKNKVFSAL FIAIFLFDIG GFPPSLLMED VARSSNVKEE EFPMPLISII bmy_06763T0/1-326 LFKNKVFSAL FIAIFLFDIG GFPPSLLMED VARSSNVKEE EFPMPLISII 351 400 ENSP00000378757/1-509 GIMTAVGKLL LGILADFKWI NTLYLYVATL IIMGLALCAI PFAKSYVTLA ENSBTAP00000026369/1-510 GIMTAVGKLI LGILADFKWI NTLYLYVATL IIMSLALCAI PFAKSYVTLA BACU019265/1-513 GIMTAVGKLV LGILADFKWI NTLYLYVATL IIMSLALCAI PFAKSYVTLA ENSTTRP00000006683/1-513 GIMTAVGKLI LGILADFKWI NTLYLYVATL IIMSLALCAI PFAKSYVTLA bmy_06763T0/1-326 GIMTAVGKLV LGILADFKWI NTLYLYVATL IIMSLALCAI PFAKSYVTLA 401 450 ENSP00000378757/1-509 LLSGILGFLT GNWSIFPYVT TKTVGIEKLA HAYGILMFFA GLGNSLGPPI ENSBTAP00000026369/1-510 LLSGILGFLT GNWSIFPYVT TKTVGIEKLA HAYGILMFFA GLGNSLGPPI BACU019265/1-513 LLSGLLGFLT GNWSIFPYVT TKTVGIEKLA HAYGILMFFA GLGNSLGPPI ENSTTRP00000006683/1-513 LLSGILGFLT GNWSIFPYVT TKTVGIEKLA HAYGILMFFA GLGNSLGPPI bmy_06763T0/1-326 LLSGVLGFLT GNWSIFPYVT TKTVGIEKLA HAYGILMFFA GLGNSLGPPI 451 500 ENSP00000378757/1-509 VGWFYDWTQT YDIAFYFSGF CVLLGGFILL LAALPSWDTC NKQLPKPAPT ENSBTAP00000026369/1-510 VGWFYDWTQT YDIAFYFSGL CVLLGGFILL LAALPSWDTC KKQLPKPAPT BACU019265/1-513 VGWFYDWTHT YDIAFYFSGF CVLLGGFILL LATLPSWDTC NKQLPKPAPT ENSTTRP00000006683/1-513 VGWFYDWTHT YDIAFYFSGF CVLLGGFILL LAALPSWDTC NKQLPKPAPT bmy_06763T0/1-326 VGWFYDWTHT YDIAFYFSGF CVLLGGFILL LAALPSWDTC NKQLPKPAPT 501 550 ENSP00000378757/1-509 TFLYKVASNV --- ENSBTAP00000026369/1-510 TFLYKVASNS --- BACU019265/1-513 TFLYKVASNS SNV ENSTTRP00000006683/1-513 TFLYKVASNS SNV bmy_06763T0/1-326 TFLYKVASNS SNV