KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:46 2014 Check: 00 .. Name: ENSP00000306888/1-585 Len: 590 Check: 2223 Weight: 1.00 Name: ENSBTAP00000026380/1-586 Len: 590 Check: 3304 Weight: 1.00 Name: ENSTTRP00000012639/1-584 Len: 590 Check: 9675 Weight: 1.00 Name: bmy_14866T0/1-580 Len: 590 Check: 1565 Weight: 1.00 Name: BACU020067/1-579 Len: 590 Check: 1699 Weight: 1.00 // 1 50 ENSP00000306888/1-585 MVCREQLSKN QVKWVFAGIT CVSVVVIAAI VLAITLRR-- --PGCELEA- ENSBTAP00000026380/1-586 IMANKG---C W-KWAIVGGV IAVLVFATAM IMGFLLQKHT ILPGCEQDGT ENSTTRP00000012639/1-584 MAYKKG---C S-KWAVVSSA SVALVFTIGM ILFFSLQQ-G ILPGCEQDAV bmy_14866T0/1-580 MAYKKGCSKC S-KWALVSSA SVALVFIIGM ILCFSLQQ-G ILPGCEQDAV BACU020067/1-579 MAYKKGCSKC S-KWALVSSA SVALVFIIGM ILCFLLQQ-G ILPGCEQDAV 51 100 ENSP00000306888/1-585 CSPDADMLDY LLSLGQISRR DALEVTWYHA ANSKKAMTAA LNSNITVLEA ENSBTAP00000026380/1-586 CRSDADMLDY LLSLGQISQR DGLLVTWYHR ANSKEQMKAA LSSNVMVLEA ENSTTRP00000012639/1-584 CRSDADMLDY LLSLGQISQH DGLLVTWYHA ANSQKEMRAA LSXXXXXXXX bmy_14866T0/1-580 CRSDADMLDY LLSLGQISQR DGLLVTWYHA ANSQKKMRAA LS-------- BACU020067/1-579 CRSDADMLDY LLSQGQISQH DGLLVTWYHA ANSQKEMRAA LRSDAVALEA 101 150 ENSP00000306888/1-585 DVNVEGLGTA NETGVPIMAH PPTIYSDNTL EQWLDAVLGS SQKGIKLDFK ENSBTAP00000026380/1-586 DITTEGLGTV NETGVPIMAH PPAIYSDNTL EQWLEAVLAS SQKGIKLDFK ENSTTRP00000012639/1-584 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXIKLDFK bmy_14866T0/1-580 NVTVEGLGTV NETGVPIMAH PPAIYSDNTL QQWLEAVLAS SQKGIKLDFK BACU020067/1-579 DVTVEGLGTV NETGVPIMAH PPAIYSDNTL QQWLEAVLAS SQKGIKLDFK 151 200 ENSP00000306888/1-585 NIKAVGPSLD LLRQLTEEGK VRRPIWINAD ILKGPNMLIS TEVNATQFLA ENSBTAP00000026380/1-586 SIKAVGPSLD LLRRLTEEGK VRRPVWINAD IQRGPNVGLS IEVNATQFLA ENSTTRP00000012639/1-584 SIKAVGPSLD -LRRLTEEGR VRRPVWINAD ILRGPNMVIP IEVNATQFLA bmy_14866T0/1-580 SIKAVGPSLD LLRRLTEEGR VRRPVWINAD ILRGPNMAIP TEVNATQFLA BACU020067/1-579 SIKAVGPSLD LLRRLTEEGR VRRPVWINAD ILRGPNMPIP IEVNATQFLA 201 250 ENSP00000306888/1-585 LVQEKYPKAT LSPGWTTFYM STSPNRTYTQ AMVEKMHELV GGVPQRVTFP ENSBTAP00000026380/1-586 LVQEKYPEAT LSPGWTTLYL PLFPDGTYTR AMVEKMQELV GAVPQKVTFP ENSTTRP00000012639/1-584 LVQEKYSKAT LSPGWTTLYL PLFPNGTYTR AMVEKMQGLV GGLPQKVTFP bmy_14866T0/1-580 LVQEKYSKAT LSPGWTTLYL PLFPKGTYTR AMVEKMQGLV EGLPQKVTFP BACU020067/1-579 LVQEKYSKVT LSPGWTTLYL PLFPKGTYTR AMVEKMQGLV EGLPQKVTFP 251 300 ENSP00000306888/1-585 VRSSMVRAAW PHFSWLLSQS ERYSLTLWQA ASDPMSVEDL LYVRDNTAVH ENSBTAP00000026380/1-586 VRAVMVRAAW PHFSWLLGQS DRYSLTMWQS ASDPVTVDDL LYIRDNAATH ENSTTRP00000012639/1-584 VRAVMVRAAW PHFSWLLGQS ERYSLTLWQA TSDPVSVDDL LYVRDNTATH bmy_14866T0/1-580 VRAVMVRAAW PHFSWLLGQS ERYSLTLWQA TSDPVSVDDL LYVRDNTATH BACU020067/1-579 VRAVMVRAAW PHFSWLLGQS ERYSLTLWQA TSDPVSVDDL LYVRDNTATH 301 350 ENSP00000306888/1-585 QVYYDIFEPL LSQFKQLALN ATRKPMYYTG GSLIPLLQLP GDDGLNVEWL ENSBTAP00000026380/1-586 QVYYDLFEPL LSQFKQRAMN TSRKPSYYTG GSLIPALQHP GDEGLSVEWL ENSTTRP00000012639/1-584 QVYYDLFEPL LSQFKQLAMN ASRKQSYYTG GSLIPFLQLP GDEGLSVEWL bmy_14866T0/1-580 QVYYDLFEPL LSQFKQLAMN TSRKQSYYTG GSLIPLLQLP GDEGLSVEWL BACU020067/1-579 QVYYDLFEPL LSQFKQLAMN TSRKQSYYTG GSLIPLLQLP GDEGLSVEWL 351 400 ENSP00000306888/1-585 VPDVQGSGKT ATMTLPDTEG MILLNTGLEG TVAENPVPIV HTPSGNILTL ENSBTAP00000026380/1-586 VPDIQGNGST ATVQLPDREG MILLDVGLQK PAAGDPVPLV RTPDGRALTL ENSTTRP00000012639/1-584 VPDIQGNRST ATVRLPDREG MILLEAGLLE PAAGDPMPIV RAPDGRVLTL bmy_14866T0/1-580 VPDIQGNRST ATVRLPDREG MILLKVGLQE PAAGDPVPIV RAPDGRALTL BACU020067/1-579 VPDIQGNRST ATVRLP---- -----VGLQE PAAGDPVPIV RAPDGRALTL 401 450 ENSP00000306888/1-585 ESCLQQLATH PGHWGIHLQI AEPAALRPSL ALLARLSSLG LLHWPVWVGA ENSBTAP00000026380/1-586 ESCLQQLAMH PGRWGIHVHI AEPTALRPSL ATLATLSALG HLSRPVWVGA ENSTTRP00000012639/1-584 EFCLLQLATR AGRWGIHVHI AEPTALRPSL ATLATLSTLG HLPRPVWVGA bmy_14866T0/1-580 EFCLLQLATR PGRWGIHVHI AEPTALRPSL ATLATLSTLG HLPRPVWVGA BACU020067/1-579 EFCLLQLATR PGRWGIHVHI AEPTALRPSL ATLATLSTLG HLPRPVWVGA 451 500 ENSP00000306888/1-585 KISHGSFSVP GHVAGRELLT AVAEVFPHVT VAPGWPEEVL GSGYREQLLT ENSBTAP00000026380/1-586 TVSHGSFMVP GYMTGRELLT AVAEVFPHVT VAPGWPEEVL GSGYREQLLT ENSTTRP00000012639/1-584 TISHGSFVVP GYVTGRELLT AVAEVFPHVT VAPGWPEEVL SSGYREQLLT bmy_14866T0/1-580 TVSHGSFVVP GYVTGRELLT AVAEVFPHVT VAPGWPEEVL SSGYREQLLT BACU020067/1-579 TVSHGSFVVP GYVTGRELLT AVAEVFPHVT VAPGWPEEVL SSGYREQLLT 501 550 ENSP00000306888/1-585 DMLELCQGLW QPVSFQMQAM LLGHSTAGAI GRLLASSPRA TVTVEHNPAG ENSBTAP00000026380/1-586 DMLELCQGLW QPVSFQLQAG PLAQSPAGVV ARLLEASPRA TVTVEHSPGR ENSTTRP00000012639/1-584 DMLELCQGLW QPVSFQLRAG PLGQSTAGVV ARLLAASPRA TVTVEHSPGW bmy_14866T0/1-580 DMLELCQGLW QPVSFQLQSG PLGQSTAGVV ARLLAASPRA TVTVEHSPGW BACU020067/1-579 DMLELCQGLW QPVSFQLQAG PLGQSAPGVV ARLLAGSARA TVTVEHSPGW 551 600 ENSP00000306888/1-585 GDYASVRTAL LAARAVDRTR VYYRLPQGYH KDLLAHVGRN ENSBTAP00000026380/1-586 GLYASVRAAL LAARAVKKTR VYYRLPQSYR QDLLADVGTH ENSTTRP00000012639/1-584 GSYASVRAVL LAARAVERTR VYYRLPQSSY QDLLVDVGRT bmy_14866T0/1-580 GSYASVRAVL LAARAVERTR VYYRLPQSYY QDLLADVGRK BACU020067/1-579 GSYASVRAVL LAARAVERTR VYYRLPQSYY QDLLADVGRK