KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:48 2014 Check: 00 .. Name: bmy_17545T0/1-127 Len: 128 Check: 8515 Weight: 1.00 Name: ENSP00000312272/1-119 Len: 128 Check: 2755 Weight: 1.00 Name: ENSTTRP00000016303/1-119 Len: 128 Check: 2755 Weight: 1.00 Name: ENSBTAP00000026389/1-119 Len: 128 Check: 2755 Weight: 1.00 Name: BACU014002/1-101 Len: 128 Check: 3157 Weight: 1.00 // 1 50 bmy_17545T0/1-127 MPSCDPGPAP ACLPTKTFRS YLPRCHRTYS CVHCRAHLAK HDELISKSFQ ENSP00000312272/1-119 --------MV KMTRSKTFQA YLPSCHRTYS CIHCRAHLAN HDELISKSFQ ENSTTRP00000016303/1-119 --------MV KMTRSKTFQA YLPSCHRTYS CIHCRAHLAN HDELISKSFQ ENSBTAP00000026389/1-119 --------MV KMTRSKTFQA YLPSCHRTYS CIHCRAHLAN HDELISKSFQ BACU014002/1-101 --------MV KMTRSKTFQA YLPSCHRTYS CIHCRAHLAN HDELISKAPE 51 100 bmy_17545T0/1-127 GSH-GRAYLF NSVVNVGCGP AEQRLLLTGL HSVADIFCES CKTTLGWKYE ENSP00000312272/1-119 GSQ-GRAYLF NSVVNVGCGP AEERVLLTGL HAVADIYCEN CKTTLGWKYE ENSTTRP00000016303/1-119 GSQ-GRAYLF NSVVNVGCGP AEERVLLTGL HAVADIYCEN CKTTLGWKYE ENSBTAP00000026389/1-119 GSQ-GRAYLF NSVVNVGCGP AEERVLLTGL HAVADIYCEN CKTTLGWKYE BACU014002/1-101 KAQEGR---- ---VNVGCGP AEERVLLTGL HAVADIYCEN CKTTLGWKYV 101 150 bmy_17545T0/1-127 QAFETSQKYK EGKYIIEMSH MVKDNGWD ENSP00000312272/1-119 HAFESSQKYK EGKYIIELAH MIKDNGWD ENSTTRP00000016303/1-119 HAFESSQKYK EGKYIIELAH MIKDNGWD ENSBTAP00000026389/1-119 HAFESSQKYK EGKYIIELAH MIKDNGWD BACU014002/1-101 ST-KESDWWR EGR------- ----EGTG