KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:28:48 2014 Check: 00 .. Name: ENSP00000261772/1-968 Len: 998 Check: 1188 Weight: 1.00 Name: ENSBTAP00000026393/1-968 Len: 998 Check: 6064 Weight: 1.00 Name: bmy_14556T0/1-974 Len: 998 Check: 9817 Weight: 1.00 Name: BACU018184/1-998 Len: 998 Check: 3238 Weight: 1.00 // 1 50 ENSP00000261772/1-968 MDSTLTASEI RQRFIDFFKR NEHTYVHSSA TIPLDDPTLL FANAGMNQFK ENSBTAP00000026393/1-968 MDSTLTAGEI RQRFIDFFKR NEHTYVHSSA TIPLDDPTLL FANAGMNQFK bmy_14556T0/1-974 MDSTLTASEI RQRFIDFFKR NEHTYVHSSA TIPLDDPTLL FANAGMNQFK BACU018184/1-998 MDSTLTASEI RQRFIDFFKR NEHTYVHSSA TIPLDDPTLL FANAGMNQFK 51 100 ENSP00000261772/1-968 PIFLNTIDPS HPMAKLSRAA NTQKCIRAGG KHNDLDDVGK DVYHHTFFEM ENSBTAP00000026393/1-968 PIFLNTIDPS HPMAKLSRAA NTQKCIRAGG KHNDLDDVGK DVYHHTFFEM bmy_14556T0/1-974 PIFLNTVDPS HPMAKLSRAA NTQKCIRAGG KHNDLDDVGK DVYHHTFFEM BACU018184/1-998 PIFLNTVDPS HPMAKLSRAA NTQKCIRAGG KHNDLDDVGK DVYHHTFFEM 101 150 ENSP00000261772/1-968 LGSWSFGDYF KELACKMALE LLTQEFGIPI ERLYVTYFGG DEAAGLEADL ENSBTAP00000026393/1-968 LGSWSFGDYF KELACKMALE LLTQEFGIPV ERLYVTYFGG DEAAGLEPDL bmy_14556T0/1-974 LGSWSFGDYF KELACKMALE LLTQEFGIPV ERLYVTYFGG DEAAGLEPDL BACU018184/1-998 LGSWSFGDYF KELACKMALE LLTQEFGIPV ERLYVTYFGG DEAAGLEPDL 151 200 ENSP00000261772/1-968 ECKQIWQNLG LDDTKILPGN MKDNFWEMGD TGPCGPCSEI HYDRIGGRDA ENSBTAP00000026393/1-968 ECKQIWQNLG LDDSRILPGN MKDNFWEMGD TGPCGPCSEI HYDRIGGRDA bmy_14556T0/1-974 ECKQIWHNLG LDDSKILPGN MKDNFWEMGD TGPCGPCSEI HYDRIGGRDA BACU018184/1-998 ECKQIWQNLG LDDSKILPGN MKDNFWEMGD TGPCGPCSEI HYDRIGGRDA 201 250 ENSP00000261772/1-968 AHLVNQDDPN VLEIWNLVFI QYNREADGIL KPLPKKSIDT GMGLERLVSV ENSBTAP00000026393/1-968 AHLVNQDDPN VLEIWNLVFI QYNRETDGIL KPLPKKSIDT GMGLERLVSV bmy_14556T0/1-974 AHLVNQDDPN VLEIWNLVFI QYNRETDGIL KPLPKKSIDT GMGLERLVSV BACU018184/1-998 AHLVNQDDPN VLEIWNLVFI QYNRETDGIL KPLPKKSIDT GMGLERLVSV 251 300 ENSP00000261772/1-968 LQNKMSNYDT DLFVPYFEAI QKGTGARPYT GKVGAEDADG IDMAYRVLAD ENSBTAP00000026393/1-968 LQNKMSNYDT DLFVPYFEAI QKGTGARPYT GRVGAEDADG IDMAYRVLAD bmy_14556T0/1-974 LQNKMSNYDT DLFVPYFEAI QKGTGARPYT GKVGADDADG IDMAYRVLAD BACU018184/1-998 LQNKMSNYDT DLFVPYFEAI QKGTGARPYT GKVGADDADG IDMAYRVLAD 301 350 ENSP00000261772/1-968 HARTITVALA DGGRPDNTGR GYVLRRILRR AVRYAHEKLN ASRGFFATLV ENSBTAP00000026393/1-968 HARTITVALA DGGRPDNTGR GYVLRRILRR AVRYSHEKLN ASRGFFATLV bmy_14556T0/1-974 HARTITVALA DGGRPDNTGR GYVLRRILRR AVRYSHEKLN ASRGFFATLA BACU018184/1-998 HARTITVALA DGGRPDNTGR GYVLRRILRR AVRYSHEKLN ASRGFFATLA 351 400 ENSP00000261772/1-968 DVVVQSLGDA FPELKKDPDM VKDIINEEEV QFLKTLSRGR RILDRKIQSL ENSBTAP00000026393/1-968 DVVVQSLGDA FPELKKDPDM VKDIINEEEV QFLKTLSRGR RILDRKIQSL bmy_14556T0/1-974 DVVVQSLGDA FPELKKDPDM VKDIINEEEV QFLKTLSRGR RILDRKIQSL BACU018184/1-998 DVVVQSLGDA FPELKKDPDM VKDIINEEEV QFLKTLSRGR RILDRKIQSL 401 450 ENSP00000261772/1-968 GDSKTIPGDT AWLLYDTYGF PVDLTGLIAE EKGLVVDMDG FEEERKLAQL ENSBTAP00000026393/1-968 GDSKTIPGDT AWLLYDTYGF PVDLTALIAE EKGLVVDMDG FDEERKLAQL bmy_14556T0/1-974 GDSKTIPGDT AWLLYDTYGF PVDLTGLIAE EKGLVVDMDG FEEERKLAQL BACU018184/1-998 GDSKTIPGDT AWLLYDTYGF PVDLTGLIAE EKGLVVDMDG FEEERKLAQL 451 500 ENSP00000261772/1-968 KSQGKGAGGE DLIMLDIYAI EELRARGLEV TDDSPKYNYH LDSSGSYVFE ENSBTAP00000026393/1-968 KSQGKGAGGE DLIMLDIYAI EELREKGLEA TDDSPKYSYH SDSSGTYVFE bmy_14556T0/1-974 KSQGKGAGGE DLIMLDIYAI EELREKGLEA TDDSPKYNYH SDSSGSYVFE BACU018184/1-998 KSQGKGAGGE DLIMLDIYAI EELREKGLEA TDDSPKYNYH SDSSGSYVFE 501 550 ENSP00000261772/1-968 NTVATVMALR REKMFVEEVS TGQECGVVLD KTCFYAEQGG QIYDEGYLVK ENSBTAP00000026393/1-968 SAVATVMALR RDRMFVEEAS TGQECGVVLD KTCFYAEQGG QTYDEGYLVK bmy_14556T0/1-974 SAVATVMALR RDKMFVEEVS TGQECGVVLD KTCFYAEQGG QIYDEGYLVK BACU018184/1-998 SAVATVMALR RDKMFVEEVS TGQECGVVLD KTCFYAEQGG QIYDEGYLVK 551 600 ENSP00000261772/1-968 VDDSSEDKTE FTVKNAQVRG GYVLHIGTIY GDLKVGDQVW LFIDEPRRRP ENSBTAP00000026393/1-968 VDDSSEDKTE FTVKNTQVRG GYVLHIGTLY GSLKVGDQVR LFIDEPRRRP bmy_14556T0/1-974 VDDSSEDKTE FTVKNAQVRG GYVLHIGTIY GNLKVGDRVR LFIDEPRRRP BACU018184/1-998 VDDSSEDKTE FTVKNAQVRG GYVLHIGTIY GNLKVGDQVR LFIDEPRRRP 601 650 ENSP00000261772/1-968 IMSNHTATHI LNFALRSVLG EADQKGSLVA PDRLRFDFTA KGAMSTQQIK ENSBTAP00000026393/1-968 VMSNHTATHI LNFALRSVLG EADQRGSLVA PDRLRFDFTA KGAMSTQQIK bmy_14556T0/1-974 VMSNHTATHI LNFALRSVLG EADQRGSLVA PDRLRFDFTA KGAMSTQQIK BACU018184/1-998 VMSNHTATHI LNFALRSVLG EADQRGSLVA PDRLRFDFTA KGAMSTQQIK 651 700 ENSP00000261772/1-968 KAEEIANEMI EAAKAVYTQD CPLAAAKAIQ GLRAVFDETY PDPVRVVSIG ENSBTAP00000026393/1-968 KAEEIANEMI EAAKPVYTED CSLAAAKAIQ GLRAVFDETY PDPVRVVSIG bmy_14556T0/1-974 KAEEIANEMI EAAKPVYTQD CPLAAAKAIQ GLRAVFDETY PDPVRVVSIG BACU018184/1-998 KAEEIANEMI EAAKPVYTQD CPLAAAKAIQ GLRAVFDETY PDPVRVVSIG 701 750 ENSP00000261772/1-968 VPVSELLDDP SGPAGSLTSV EFCGGTHLRN SSHAGAFVIV TEEAIAKGIR ENSBTAP00000026393/1-968 VPVSELLDDP SGPAGSLTSV EFCGGTHLQN SSHAGAFVIV SEEAIAKGIR bmy_14556T0/1-974 VPVSELLDDP SGPAGSLTSV EFCGGTHLQN SSHAGAFVIV SEEAIAKGIR BACU018184/1-998 VPVSELLDDP SGPAGSLTSV EFCGGTHLQN SSHAGAFVIV SEEAIAKGIR 751 800 ENSP00000261772/1-968 RIVAVTGAEA QKALRKAESL KKCLSVMEAK VKAQTAPNKD VQREIADLGE ENSBTAP00000026393/1-968 RIVAVTGAEA QKALRKAESL KKSLCVVEAK VKAQAAPNKD VQREIADLGE bmy_14556T0/1-974 RIVAVTGAEA QKALRKAESL KKSLSVTEAK VKAQTAPNKD VQREIADLGE BACU018184/1-998 RIVAVTGAEA QKALRKAESL KKSLSVTEAK VKAQTAPNKD VQREIADLGE 801 850 ENSP00000261772/1-968 ALATAVIPQW QKDELRETLK SLKKVMDDLD RASKADVQKR VLEKTKQFID ENSBTAP00000026393/1-968 ALATAIIPQW QKDEFRENLK SLKKVMDDLD RASKADVQKR VLEKTKQLID bmy_14556T0/1-974 ALATAVIPQW QKDEFRENLK SLKKIMDDLD RANKADVQKR VLEKTKQLID BACU018184/1-998 ALATAVIPQW QKDEFRENLR SLKKIMDDLD RANKADVQKR VLEKTKQLID 851 900 ENSP00000261772/1-968 SNPNQPLVIL EMESGA---- ---------- ---------- ------SAKA ENSBTAP00000026393/1-968 SSPNQPLVIL EVESGA---- ---------- ---------- ------SAKA bmy_14556T0/1-974 SSPNQPLVIL EMESGP---- ---WPDAR-- ---------- -----FSPQA BACU018184/1-998 SSPNQPLVIL EMESGASAKA SRGWGSTAPP CACLLLVSSS RGLSLLVAEA 901 950 ENSP00000261772/1-968 LNEALKLFKM HSPQTSAMLF TVDNEAGKIT CLCQVPQNAA NRGLKASEWV ENSBTAP00000026393/1-968 LNEALKLFKM HSPQTSAMLF TVDNEAGRIT CLCQVPQNAA NRGLKASEWV bmy_14556T0/1-974 LNEALKLFKT HSPETSAMLF TVDNEAGKIT CLCQVPQNAA NRGLKASEWV BACU018184/1-998 LNEALKLFKT HSPETSAMLF TVDNEAGKIT CLCQVPQNAA NRGLKASEWV 951 1000 ENSP00000261772/1-968 QQVSGLMDGK GGGKDVSAQA TGKNVGCLQE ALQLATSFAQ LRLGDVKN ENSBTAP00000026393/1-968 QQVSGLMDGK GGGKDVSAQA TGKNVGCLQE ALQLATSFAQ LRLGDVKN bmy_14556T0/1-974 QQVSGLMDGK GGGKDVSAQA TGKNVGCLQE ALQLATSFAQ FHLGDVKN BACU018184/1-998 QQVSGLMDGK GGGKDVSAQA TGKNVGCLQE ALQLATSFAQ LHLGDVKN