KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:52 2014 Check: 00 .. Name: ENSTTRP00000016479/1-573 Len: 575 Check: 1474 Weight: 1.00 Name: bmy_18669T0/1-305 Len: 575 Check: 9109 Weight: 1.00 Name: ENSP00000353910/1-575 Len: 575 Check: 7773 Weight: 1.00 Name: BACU010743/1-423 Len: 575 Check: 8524 Weight: 1.00 Name: ENSBTAP00000026406/1-575 Len: 575 Check: 7762 Weight: 1.00 // 1 50 ENSTTRP00000016479/1-573 MRPWTGSWRW IMLILFAWGT LLFYIGGHLV RDNDHPDHSS RELSKILAKL bmy_18669T0/1-305 ---------M I--------- ---------- ---------- ---------- ENSP00000353910/1-575 MRPWTGSWRW IMLILFAWGT LLFYIGGHLV RDNDHPDHSS RELSKILAKL BACU010743/1-423 MRPWTGSWRW IMLILFAWGT LLFYIGGHLV RDNDHPDHSS RELSKILAKL ENSBTAP00000026406/1-575 MRPWTGSWRW IMLILFAWGT LLFYIGGHLV RDNDHPDHSS RELSKILAKL 51 100 ENSTTRP00000016479/1-573 ERLKQQNEDL RRMAESLRIP EGPIDQGPAS GRVRALEEQL VKAKEQIENY bmy_18669T0/1-305 ---------- ---------- ---------- ---------- ---------- ENSP00000353910/1-575 ERLKQQNEDL RRMAESLRIP EGPIDQGPAI GRVRVLEEQL VKAKEQIENY BACU010743/1-423 ERLKQQNEDL RRMAESLRIP EGPIDQGPAS GRVRALEEQL VKAKEQIENY ENSBTAP00000026406/1-575 ERLKQQNEDL RRMAESLRIP EGPIDQGPAS GRIRALEEQL VKAKEQIENY 101 150 ENSTTRP00000016479/1-573 KKQTRNGLGK DHEVLRRRIE NGAKELWFFL QSELKKLKNL EGNELQRHAD bmy_18669T0/1-305 ---------- ---------- ---------- ---------- ---------- ENSP00000353910/1-575 KKQTRNGLGK DHEILRRRIE NGAKELWFFL QSELKKLKNL EGNELQRHAD BACU010743/1-423 KKQTRNGLGK DHEILRRRIE NGAKELWFFL QSELKKLKNL EGNELQRHAD ENSBTAP00000026406/1-575 KKQTRNGLGK DHEILRRRIE NGAKELWFFL QSELKKLKNL EGNELQRHAD 151 200 ENSTTRP00000016479/1-573 EFLSDLGHHE XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXN bmy_18669T0/1-305 ---------- ---------- ---------- ---------- ---------- ENSP00000353910/1-575 EFLLDLGHHE RSIMTDLYYL SQTDGAGDWR EKEAKDLTEL VQRRITYLQN BACU010743/1-423 EFLSDLGHHE RSIMTDLYYL SQTDGAGDWR EKEAKDLTEL VQRRITYLQN ENSBTAP00000026406/1-575 EFLSDLGHHE RSIMTDLYYL SQTDGAGDWR EKEAKDLTEL VQRRITYLQN 201 250 ENSTTRP00000016479/1-573 PKDCSKAKKL VCNINKGCGY GCQLHHVVYC FMIAYGTQRT LILESHNWRY bmy_18669T0/1-305 ---------- ---------- ---------C FDIP------ ---------- ENSP00000353910/1-575 PKDCSKAKKL VCNINKGCGY GCQLHHVVYC FMIAYGTQRT LILESQNWRY BACU010743/1-423 PKDCSKAKKL VCNINKGCGY GCQLHHVVYC FMIAYGTQRT LILESHNWRY ENSBTAP00000026406/1-575 PKDCSKAKKL VCNINKGCGY GCQLHHVVYC FMIAYGTQRT LILESHNWRY 251 300 ENSTTRP00000016479/1-573 ATGGWETVFR PVSETCTDRS GISTGHWSGE VKDKNVQ-VE LPIVDSLHPR bmy_18669T0/1-305 ---------- ---------- -------SGE VKDKNVQVVE LPIVDSLHPR ENSP00000353910/1-575 ATGGWETVFR PVSETCTDRS GISTGHWSGE VKDKNVQVVE LPIVDSLHPR BACU010743/1-423 ATGGWETVFR PVSETCTDRS GISTGHWSGE VKDKNVQVVE LPIVDSLHPR ENSBTAP00000026406/1-575 ATGGWETVFR PVSETCTDRS GVSTGHWSGE IKDKNVQVVE LPIVDSLHPR 301 350 ENSTTRP00000016479/1-573 PPYLPLAVPE DFADRLVRVH GD-AVWWVSQ FVKYLIRPQP WLEKEIEEAT bmy_18669T0/1-305 PPYLPLAVPE DLADRLVRVH GDPAVWWVSQ FVKYLIRPQP WLEKEIEEAT ENSP00000353910/1-575 PPYLPLAVPE DLADRLVRVH GDPAVWWVSQ FVKYLIRPQP WLEKEIEEAT BACU010743/1-423 PPYLPLAVPE DLADRLVRVH GDPAVWWVSQ FVKYLIRPQP WLEKEIEEAT ENSBTAP00000026406/1-575 PPYLPLAVPE DLADRLVRVH GDPAVWWVSQ FVKYLIRPQP WLEKEIEEAT 351 400 ENSTTRP00000016479/1-573 KKLGFKHPVI GVHVRRTDKV GTEAAFHPIE EYMVHVEEHF QLLARRMQVD bmy_18669T0/1-305 KKLGFKHPVI GVHVRRTDKV GTEAAFHPIE EYMVHVEEHF QLLARRMQVD ENSP00000353910/1-575 KKLGFKHPVI GVHVRRTDKV GTEAAFHPIE EYMVHVEEHF QLLARRMQVD BACU010743/1-423 KKLGFKHPVI GVHVRRTDKV GTEAAFHPIE EYMVHVEEHF QLLARRMQVD ENSBTAP00000026406/1-575 KKLGFKHPVI GVHVRRTDKV GTEAAFHPIE EYMVHVEEHF QLLARRMQVD 401 450 ENSTTRP00000016479/1-573 KKRVYLATDD PSLLKEAKTX XXXXXXXXXX XXXXXXXLHN RYTENSLRGV bmy_18669T0/1-305 KKRVYLATDD PSLLKEAKTK YPSYEFISDN SISWSAGLHN RYTENSLRGV ENSP00000353910/1-575 KKRVYLATDD PSLLKEAKTK YPNYEFISDN SISWSAGLHN RYTENSLRGV BACU010743/1-423 KKRVYLATDD PSLLKEAK-- ---------- -INWTT---- ---------- ENSBTAP00000026406/1-575 KKRVYLATDD PSLLKEAKTK YPHYEFISDN SISWSAGLHN RYTENSLRGV 451 500 ENSTTRP00000016479/1-573 ILDIHFLSQA DFLVCTFSSQ VCRVAYEIMQ TLHPDASANF HSLDDIYYFG bmy_18669T0/1-305 ILDIHFLSQA DFLVCTFSSQ VCRVAYEIMQ TLHPDASANF HSLDDIYYFG ENSP00000353910/1-575 ILDIHFLSQA DFLVCTFSSQ VCRVAYEIMQ TLHPDASANF HSLDDIYYFG BACU010743/1-423 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026406/1-575 ILDIHFLSQA DFLVCTFSSQ VCRVAYEIMQ TLHPDASANF HSLDDIYYFG 501 550 ENSTTRP00000016479/1-573 GQNAHNQIAI YPHQPRTADE IPMEPGDIIG VAGNHWDGYS KGVNRKLGRT bmy_18669T0/1-305 GQNAHNQIAI YPHQPRTADE IPMEPGDIIG VAGNHWDGYS KGVNRKLGRT ENSP00000353910/1-575 GQNAHNQIAI YAHQPRTADE IPMEPGDIIG VAGNHWDGYS KGVNRKLGRT BACU010743/1-423 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026406/1-575 GQNAHNQIAI YPHEPRTADE IPMEPGDIIG VAGNHWDGYS KGVNRKLGRT 551 600 ENSTTRP00000016479/1-573 GLYPSYKVRE KIETVKYPTY PEAEK bmy_18669T0/1-305 GLYPSYKVRE KIETVKYPTY PEAEK ENSP00000353910/1-575 GLYPSYKVRE KIETVKYPTY PEAEK BACU010743/1-423 ---------- ---------- ----- ENSBTAP00000026406/1-575 GLYPSYKVRE KIETVKYPTY PEAEK