KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:55 2014 Check: 00 .. Name: ENSP00000312311/1-279 Len: 363 Check: 1206 Weight: 1.00 Name: ENSBTAP00000026420/1-277 Len: 363 Check: 3038 Weight: 1.00 Name: BACU016103/1-294 Len: 363 Check: 5979 Weight: 1.00 Name: bmy_09060T0/1-280 Len: 363 Check: 4541 Weight: 1.00 Name: ENSTTRP00000008239/1-280 Len: 363 Check: 5201 Weight: 1.00 // 1 50 ENSP00000312311/1-279 MAAPVRRTLL GVAGGWRRFE RLWAGSLSSR SLALAAAPSS NGSPWRLLGA ENSBTAP00000026420/1-277 MAAPTRRTVL GLARCWRRLE SPW--SLGSR SLTLAAAPSN SASPWRLLGA BACU016103/1-294 ---------- ---------- ---------- ---------- ---------- bmy_09060T0/1-280 MAAPVRLTVL GVARGWRRFE GPWTRSLGSR SLALATAPSS SASPWRLLGA ENSTTRP00000008239/1-280 MAGPVRVTVL GVARGWRQFE GPWTRSLGSR SLALAAAPSS SASPWRLLGA 51 100 ENSP00000312311/1-279 LCLQRPPVVS KPLTPLQEEM ASLLQQIEIE RSLYSDHELR ALDENQRLAK ENSBTAP00000026420/1-277 LCLQRPPLVS KQLTPMQEEM AALLQQMEIE RSLYSDHELR ALDEAEQLEK BACU016103/1-294 ---------- ---------M KALLQQIEVE RSLYSDHELR ALDEAQQLAK bmy_09060T0/1-280 LCLQRPPLVS KPLTPLQEEM KALLQQIEIE RSLYSDHELH ALDEAQQLAK ENSTTRP00000008239/1-280 LCLQRPPLVS KPLTPLQEEM EALLQQIEIE RSLYSDHELR ALDEAQKLAK 101 150 ENSP00000312311/1-279 KKADLH-DEE DEQDILLAQD LEDMWEQKFL QFKLGARITE ADEKNDRTSL ENSBTAP00000026420/1-277 KKSDLY-EEK DEKNILLVQD LEDMWEQKFL QFKPGARITD ADVKNDRSSL BACU016103/1-294 KKSDLYGEEE DERNILLLQD LEDMWEQKFL QFKPGARITE ADVKNDRTSL bmy_09060T0/1-280 KKSDLYGEEE DERNILLLQD LEDMWEQKFL QFRPGARITE ADVKNDRTSL ENSTTRP00000008239/1-280 KKSDLYGEEE DEQNILLLQD LEDMWEQKFL QFKPGARITE ADVKNDRTSL 151 200 ENSP00000312311/1-279 NRKLDRNLVL LVREKFGDQD VWILPQAEWQ PGETLRGTAE RTLATLSENN ENSBTAP00000026420/1-277 HRKLDRNLIL LVKDKLGDQD VWMLPQAEWQ PGETLRQTAE RTLATLSENN BACU016103/1-294 HRKLDRNLIL LIKEKLGDQD VWMLPQAEWQ PGETLRRTAE RTLATLSENN bmy_09060T0/1-280 HRKLDRNLIL LIKEKLGDQD VWMLPQAEWQ PGETLRRTAE RTLATLSENN ENSTTRP00000008239/1-280 HRKLDRNLIL LVREKLGDQD VWMLPQAEWQ PGETLRRTAE RTLATLSENN 201 250 ENSP00000312311/1-279 MEAKFLGNAP CGHYTFKFPQ AMRTESNLGA KVFFFKALLL TGDFSQAGNK ENSBTAP00000026420/1-277 LEAKFLGNAP CGHYKFKFPQ AVRAEGSLGA KIFFFKALLL TGDFSPAVEK BACU016103/1-294 MEAKFLGNAP CGHYKFKFPQ AMRTESSLGA KIFFFKALLL TGDFFEAGKK bmy_09060T0/1-280 MEAKFLGNAP CGHYKFKFPQ AMRKESSLGA KIFFFKALLL SGDFFEAGKK ENSTTRP00000008239/1-280 MEAKFLGNAP CGHYKFKFPQ AMRTESSLGA KIFFFKALLL TGDFFEAGKK 251 300 ENSP00000312311/1-279 GHHVWVT--- ---------- ---------- ---------- ---------- ENSBTAP00000026420/1-277 GRHVWAS--- ---------- ---------- ---------- ---------- BACU016103/1-294 GHHVWVSYTC DSQAFLTYLE RNVGNLDIDG FHQPISEPMD PWKGLNGDNS bmy_09060T0/1-280 GHHVWVS--- ---------- ---------- ---------- ---------- ENSTTRP00000008239/1-280 GHHVWVS--- ---------- ---------- ---------- ---------- 301 350 ENSP00000312311/1-279 ---KDEL--- ---------- --GDYLKPKY LAQV------ ---------- ENSBTAP00000026420/1-277 ---KEEL--- ---------- --GDYLKPKY LAQV------ ---------- BACU016103/1-294 GEHEEDLEWR TIETKEIEVV ELGEEKDESH GLQVCILLIQ GTELEMQRME bmy_09060T0/1-280 ---KEEL--- ---------- --GDYLKPKY LAQV------ ---------- ENSTTRP00000008239/1-280 ---KEEL--- ---------- --GDYLKPKY LAQV------ ---------- 351 400 ENSP00000312311/1-279 ------RRFV SDL ENSBTAP00000026420/1-277 ------RRFL LDL BACU016103/1-294 FWEITTREEF LDI bmy_09060T0/1-280 ------RRFL LDL ENSTTRP00000008239/1-280 ------RRFL LDL