KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:28:58 2014 Check: 00 .. Name: BACU011668/1-729 Len: 748 Check: 7896 Weight: 1.00 Name: ENSP00000262435/1-748 Len: 748 Check: 1246 Weight: 1.00 Name: ENSBTAP00000026451/1-730 Len: 748 Check: 79 Weight: 1.00 Name: ENSTTRP00000008398/1-648 Len: 748 Check: 6396 Weight: 1.00 Name: bmy_06555T0/1-736 Len: 748 Check: 8153 Weight: 1.00 // 1 50 BACU011668/1-729 ---------- --------MC TPLPSLRLIQ GLPDPFAKVV VDGSGQCHST ENSP00000262435/1-748 MSNPGGRRNG PVKLRLTVLC AKNLVKKDFF RLPDPFAKVV VDGSGQCHST ENSBTAP00000026451/1-730 ---------- -------VLC AKNLVKKDFF RLPDPFAKVV VDGSGQCHST ENSTTRP00000008398/1-648 ---------- --------LC AKNLVKKDFF RLPDPFAKVV VDGSGQCHST bmy_06555T0/1-736 ---------- -MSVETVLLC AKNLVKKDFF RLPDPFAKVV VDGSGQCHST 51 100 BACU011668/1-729 DTVKNTLDPK WNQHYDLYIG KSDSVTISVW NHKKIHKKQG AGFLGCVRLL ENSP00000262435/1-748 DTVKNTLDPK WNQHYDLYIG KSDSVTISVW NHKKIHKKQG AGFLGCVRLL ENSBTAP00000026451/1-730 DTVKNTLDPK WNQHYDLYIG KSDSVTISVW NHKKIHKKQG AGFLGCVRLL ENSTTRP00000008398/1-648 DTVKNTLDPK WNQHYDLYIG KSDSVTISVW NHKKIHKKQG AGFLGCVRLL bmy_06555T0/1-736 DTVKNTLDPK WNQHYDLYIG KSDSVTISVW NHKKIHKKQG AGFLGCVRLL 101 150 BACU011668/1-729 SNAINRLKDT GYQRLDLCKL GPNDNDTVRG QIVVSLQSRD RIGTGGQVVD ENSP00000262435/1-748 SNAINRLKDT GYQRLDLCKL GPNDNDTVRG QIVVSLQSRD RIGTGGQVVD ENSBTAP00000026451/1-730 SNAINRLKDT GYQRLDLCKL GPNDNDTVRG QIVVSLQSRD RIGTGGQVVD ENSTTRP00000008398/1-648 SNAINRLKDT GYQRLDLCKL GPNDNDTVRG QIVVSLQSRD RIGTGGQVVD bmy_06555T0/1-736 SNAINRLKDT GYQRLDLCKL GPNDNDTVRG QIVVSLQSRD RIGTGGQVVD 151 200 BACU011668/1-729 CSRLFDNDLP DGWEERRTAS GRIQYLNHIT RTTQWERPTR PASEYSSPGR ENSP00000262435/1-748 CSRLFDNDLP DGWEERRTAS GRIQYLNHIT RTTQWERPTR PASEYSSPGR ENSBTAP00000026451/1-730 CSRLFDNDLP DGWEERRTAS GRIQYLNHIT RTTQWERPTR PASEYSSPGR ENSTTRP00000008398/1-648 CSRLFDNDLP DGWEERRTAS GRIQYLNHIT RTTQWERPTR PASEYSSPGR bmy_06555T0/1-736 CSRLFDNDLP DGWEERRTAS GRIQYLNHIT RTTQWERPTR PASEYSSPGR 201 250 BACU011668/1-729 PLSCFVDENT PISGTNGATS GQSSDPRLAE RRVRSQRHRN YMSRTHLHTP ENSP00000262435/1-748 PLSCFVDENT PISGTNGATC GQSSDPRLAE RRVRSQRHRN YMSRTHLHTP ENSBTAP00000026451/1-730 PLSCFVDENT PISGTNGATC GQSSDPRLAE RRVRSQRHRN YMSRTHLHTP ENSTTRP00000008398/1-648 PLSCFVDENT PISGTNGATS GQSSDPRLAE RRVRSQRHRN YMSRTHLHTP bmy_06555T0/1-736 PLSCFVDENT PISGTNGATS GQSSDPRLAE RRVRSQRHRN YMSRTHLHTP 251 300 BACU011668/1-729 PDLPEGYEQR TTQQGQVYFL HTQTGVSTWH DPRVPRDLSN INCEELGPLP ENSP00000262435/1-748 PDLPEGYEQR TTQQGQVYFL HTQTGVSTWH DPRVPRDLSN INCEELGPLP ENSBTAP00000026451/1-730 PDLPEGYEQR TTQQGQVYFL HTQTGVSTWH DPRVPRDLSN INCEELGPLP ENSTTRP00000008398/1-648 PDLPEGYEQR TTQQGQVYFL HTQTGVSTWH DPRVPRDLSN INCEELGPLP bmy_06555T0/1-736 PDLPEGYEQR TTQQGQVYFL HTQTGVSTWH DPRVPRDLSN INCEELGPLP 301 350 BACU011668/1-729 PGWEIRNTAT GRVYFVDHNN RTTQFTDPRL SANLHLVLNR QNQLKD-QQQ ENSP00000262435/1-748 PGWEIRNTAT GRVYFVDHNN RTTQFTDPRL SANLHLVLNR QNQLKDQQQQ ENSBTAP00000026451/1-730 PGWEIRNTAT GRVYFVDHNN RTTQFTDPRL SANLHLVLNR QNQLKD-QQQ ENSTTRP00000008398/1-648 PGWEIRNTAT GRVYFVDHNN RTTQFTDPRL SANLHLVLNR QNQLKD-QQQ bmy_06555T0/1-736 PGWEIRNTAT GRVYFVDHNN RTTQFTDPRL SANLHLVLNR QNQLKD-QQQ 351 400 BACU011668/1-729 QVVSLCPDDT ECLTVPRYKR DLVQKLKILR QELSQQQPQA GHCRIEVSRE ENSP00000262435/1-748 QVVSLCPDDT ECLTVPRYKR DLVQKLKILR QELSQQQPQA GHCRIEVSRE ENSBTAP00000026451/1-730 QVVSLCPDDT ECLTVPRYKR DLVQKLKILR QELSQQQPQA GHCRIEVSRE ENSTTRP00000008398/1-648 QVVSLCPDDT ECLTVPRYKR DLVQKLKILR QELSQQQPQA GHCRIEVSRE bmy_06555T0/1-736 QVVSLCPDDT ECLTVPRYKR DLVQKLKILR QELSQQQPQA GHCRIEVSRE 401 450 BACU011668/1-729 EIFEESYRQV MKMRPKDLWK RLMIKFRGEE GLDYGGVARE WLYLLSHEML ENSP00000262435/1-748 EIFEESYRQV MKMRPKDLWK RLMIKFRGEE GLDYGGVARE WLYLLSHEML ENSBTAP00000026451/1-730 EIFEESYRQV MKMRPKDLWK RLMIKFRGEE GLDYGGVARE WLYLLSHEML ENSTTRP00000008398/1-648 EIFEESYRRV MKMRPKDLWK RLMIKFRGEE -LDY-GVARE WLYLLSHEML bmy_06555T0/1-736 EIFEESYRQV MKMRPKDLWK RLMIKFRGEE GLDYGGVARE WLYLLSHEML 451 500 BACU011668/1-729 NPYYGLFQYS RDDIYTLQIN PDSAVNPEHL SYFHFVGRIM GMAVFHGHYI ENSP00000262435/1-748 NPYYGLFQYS RDDIYTLQIN PDSAVNPEHL SYFHFVGRIM GMAVFHGHYI ENSBTAP00000026451/1-730 NPYYGLFQYS RDDIYTLQIN PDSAVNPEHL SYFHFVGRIM GMAVFHGHYI ENSTTRP00000008398/1-648 NPYYGLFQYS RDDIYTLQIN PDSAVNPEHL SYFHFVGRIM GMAVFHGHYI bmy_06555T0/1-736 NPYYGLFQYS RDDIYTLQIN PDSAVNPEHL SYFHFVGRIM GMAVFHGHYI 501 550 BACU011668/1-729 DGGFTLPFYK QLLGKSITLD DMELVDPDLH NSLVWILEND ITGVLDHTFC ENSP00000262435/1-748 DGGFTLPFYK QLLGKSITLD DMELVDPDLH NSLVWILEND ITGVLDHTFC ENSBTAP00000026451/1-730 DGGFTLPFYK QLLGKSITLD DMELVDPDLH NSLVWILEND TTGVLDHTFC ENSTTRP00000008398/1-648 DGGFTLPFYK QLLGKSITLD DMELVDPDLH NSLVWIL--- ---------- bmy_06555T0/1-736 DGGFTLPFYK QLLGKSITLD DMELVDPDLH NSLVWILEND ITGVLDHTFC 551 600 BACU011668/1-729 VEHNAYGEII QHELKPNGKS IPVTEENKKE YVRLYVNWRF LRGIEAQFLA ENSP00000262435/1-748 VEHNAYGEII QHELKPNGKS IPVNEENKKE YVRLYVNWRF LRGIEAQFLA ENSBTAP00000026451/1-730 VEHNAYGEII QHELKPNGKS IPVTEENKKE YVRLYVNWRF LRGIEAQFLA ENSTTRP00000008398/1-648 ---------- ---------- ---------- ---LYVNWRF LRGIEAQFLA bmy_06555T0/1-736 VEHNAYGEII QHELKPNGKS IPVTEENKKE YVRLYVNWRF LRGIEAQFLA 601 650 BACU011668/1-729 LQKGFNEVIP QHLLKTFDEK ELELIICGLG KIDVNDWKVN TRLKHCTPDS ENSP00000262435/1-748 LQKGFNEVIP QHLLKTFDEK ELELIICGLG KIDVNDWKVN TRLKHCTPDS ENSBTAP00000026451/1-730 LQKGFNEVIP QHLLKTFDEK ELELIICGLG KIDVNDWKVN TRLKHCTPDS ENSTTRP00000008398/1-648 LQKGFNEVIP QHLLKTFDEK ELELIICGLG KIDVNDWKVN TRLKHCTPDS bmy_06555T0/1-736 LQKGFNEVIP QHLLKTFDEK ELELIICGLG KIDVNDWKVN TRLKHCTPDS 651 700 BACU011668/1-729 NVVKWFWKAV EFFDEERRAR LLQFVTGSSR VPLQGFKALQ GAAGPRLFTI ENSP00000262435/1-748 NIVKWFWKAV EFFDEERRAR LLQFVTGSSR VPLQGFKALQ GAAGPRLFTI ENSBTAP00000026451/1-730 NVVKWFWKAV EFFDEERRAR LLQFVTGSSR VPLQGFKALQ GAAGPRLFTI ENSTTRP00000008398/1-648 NVVKWFWKAV EFFDEERRAR LLQFVTGSSR VPLQGFKALQ GAAGPRLFTI bmy_06555T0/1-736 NVVKWFWKAV EFFDEERRAR LLQFVTGSSR VPLQGFKALQ GAAGPRLFTI 701 750 BACU011668/1-729 HQIDACTNNL PKAHTCFNRI DIPPYESYEK LYEKLLTAIE ETCGFAVE ENSP00000262435/1-748 HQIDACTNNL PKAHTCFNRI DIPPYESYEK LYEKLLTAIE ETCGFAVE ENSBTAP00000026451/1-730 HQIDACTNNL PKAHTCFNRI DIPPYESYEK LYEKLLTAIE ETCGFAVE ENSTTRP00000008398/1-648 HQIDACTNNL PKAHT----- ---------- ---------- -------- bmy_06555T0/1-736 HQIDACTNNL PKAHTCFNRI DIPPYESYEK LYEKLLTAIE ETCGFAVE