KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:01 2014 Check: 00 .. Name: ENSTTRP00000007693/1-772 Len: 773 Check: 3058 Weight: 1.00 Name: ENSBTAP00000026474/1-760 Len: 773 Check: 7773 Weight: 1.00 Name: ENSP00000263209/1-773 Len: 773 Check: 6171 Weight: 1.00 Name: bmy_02438T0/1-511 Len: 773 Check: 8955 Weight: 1.00 Name: BACU017092/1-754 Len: 773 Check: 625 Weight: 1.00 // 1 50 ENSTTRP00000007693/1-772 METCESPSPL PREPAGGAVM ENQACPLRAL PRGQSPPPPL QTSSDAEVMD ENSBTAP00000026474/1-760 METCGSPSPL PREPAGGVAM EDRARPLRAL PRGQSPPPPL QTSSDAEVMD ENSP00000263209/1-773 METDESPSPL PCGPAGEAVM ESRARPFQAL PREQSPPPPL QTSSGAEVMD bmy_02438T0/1-511 ---------- ---------- ---------- ---------- ---------- BACU017092/1-754 ---------- ---------M ENQACPLRAL PRGQSPPPPL QTSSDAEVMD 51 100 ENSTTRP00000007693/1-772 VGSGGDGQAE PPAEDPLNFY GASLLSKGSF YKARLLVDPN CSGHSPRTAR ENSBTAP00000026474/1-760 VGSGGDGQAE PPAEDPLNFY GASLLSKGSS SKARLLVDPN CSGHSPRTAR ENSP00000263209/1-773 VGSGGDGQSE LPAEDPFNFY GASLLSKGSF SKGRLLIDPN CSGHSPRTAR bmy_02438T0/1-511 ---------- ---------- ---------- ---------- ---------- BACU017092/1-754 VGSGGDGQAE PPAEDPLNFY GASLLSKGSF SKARLLVDPN CSGHSPRTAR 101 150 ENSTTRP00000007693/1-772 HAPAVRKFSP DLKLLKDVKI SVSFTESCRS KDRKVLYTGA ERDARAECGL ENSBTAP00000026474/1-760 HAPAVRKFSP DLKLLKDVKI SVSFTESCRS EDRKVLYTGA ERDVRAECGL ENSP00000263209/1-773 HAPAVRKFSP DLKLLKDVKI SVSFTESCRS KDRKVLYTGA ERDVRAECGL bmy_02438T0/1-511 ---------- ---------- ---------- ---------- ---------- BACU017092/1-754 HAPAVRKFSP DLKLLKDVKI SVSFTESCRS KDRKVLYTGA ERDARAECGL 151 200 ENSTTRP00000007693/1-772 ALSPVSGDVH ACPFGGSVGN GVGVGGESAD KKDEENELDQ EKRVEYAVLD ENSBTAP00000026474/1-760 ALSPVIGDVH AGPFGGSVGN GVGAGGESAG KRDEEHELDQ EKRVEYAVLD ENSP00000263209/1-773 LLSPVSGDVH ACPFGGSVGD GVGIGGESAD KKDEENELDQ EKRVEYAVLD bmy_02438T0/1-511 ---------- ---------- ---------- ---------- ---------- BACU017092/1-754 ALSPVSGDVH ACPFGGSVGN GVGVGGESAD KKDEENELDQ EKRVEYAVLD 201 250 ENSTTRP00000007693/1-772 ELEDFTDNLE LDEEGAGGLT AKAIVQRDRV DEEALKFSYE DDFDNDVDAL ENSBTAP00000026474/1-760 ELEDFTDNLE LDEEGAGGFT AKAIVQRDRV DEEALNFSYE DDFDNDVDAL ENSP00000263209/1-773 ELEDFTDNLE LDEEGAGGFT AKAIVQRDRV DEEALNFPYE DDFDNDVDAL bmy_02438T0/1-511 ---------- ---------- ---------- ---------- ---------- BACU017092/1-754 ELEDFTDNLE LDEEGAGGLT AKAIVQRDRV DEEALKFSYE DDFDNDVDAL 251 300 ENSTTRP00000007693/1-772 LEEGLCAPKK RRMEEKYGGD SDHPSDGETS VQPMMTKIKT VLKSRGRPPT ENSBTAP00000026474/1-760 LEEGLCAPKK RRMEEKYGGD SDHPSDGETS VQPMMTKIKT VLKSRGRPPT ENSP00000263209/1-773 LEEGLCAPKK RRTEEKYGGD SDHPSDGETS VQPMMTKIKT VLKSRGRPPT bmy_02438T0/1-511 ---------- --MEEKYGGD SDHPSDGETS VQPMMTKIKT VLKSRGRPPT BACU017092/1-754 LEEGLCAPKK RRMEEKYGGD SDHPSDGETS VQPMMTKIKT VLKSRGRPPT 301 350 ENSTTRP00000007693/1-772 EPLPDGWIMT FHNSGVPVYL HRESRVVTWS RPYFLGTGSI RKHDPPLSSI ENSBTAP00000026474/1-760 EPLPDGWIMT FHNSGVPVYL HRESRVVTWS RPYFLGTGSI RKHGPPLTSI ENSP00000263209/1-773 EPLPDGWIMT FHNSGVPVYL HRESRVVTWS RPYFLGTGSI RKHDPPLSSI bmy_02438T0/1-511 EPLPDGWIMT FHNSGVPVYL HRESRVVTWS RPYFLGTGSI RKHDPPLSSI BACU017092/1-754 EPLPDGWIMT FHNSGVPVYL HRESRVVTWS RPYFLGTGSI RKHDPPLSSI 351 400 ENSTTRP00000007693/1-772 PCLHYKKMKD NEEREQNSEL APCGEVSPAK PLSRSAELEL PLEEPDSLGA ENSBTAP00000026474/1-760 PCLHYRKMKD SEERERAAGI AP-------- -----PEPEL PPDEPDPLGT ENSP00000263209/1-773 PCLHYKKMKD NEEREQSSDL TPSGDVSPVK PLSRSAELEF PLDEPDSMGA bmy_02438T0/1-511 PCLHYKKMKD NEEREQNSEL SPCGEVSPAK PLSRSAELEL PLEEPDSLGA BACU017092/1-754 PCLHYKKMKD NEEREQNSEL SPCGEVSPAK PLSRSAELEL PLEDPDSLGA 401 450 ENSTTRP00000007693/1-772 DLGPPDEKDP LAAEAAPGAL GQVKAKVEVC KDESVDLEEF RNYLEKRFDF ENSBTAP00000026474/1-760 DAGPPDEKDP LGAEAAPGAL GQVKAKVEVC KDESVDLEEF RNYLEKRFDF ENSP00000263209/1-773 DPGPPDEKDP LGAEAAPGAL GQVKAKVEVC KDESVDLEEF RSYLEKRFDF bmy_02438T0/1-511 DLGPPDEKDP LGAEAAPGAL GQVKAKVEVC KDESVDLEEF RNYLEKRFDF BACU017092/1-754 DLGPPDEKDP LGAEAAPGAL GQVKAKVEVC KDESVDLEEF RNYLEKRFDF 451 500 ENSTTRP00000007693/1-772 EQVTVKKFRT WAERRQFNRE MKRKQAESER PILPANQKLI TLSVQDAPTK ENSBTAP00000026474/1-760 EQVTVKKFRT WAERRQFNRE MKRKQAESER PILPANQKLI TLSVQDAPTK ENSP00000263209/1-773 EQVTVKKFRT WAERRQFNRE MKRKQAESER PILPANQKLI TLSVQDAPTK bmy_02438T0/1-511 EQVTVKKFRT WAERRQFNRE MKRKQAESER PILPANQKLI TLSVQDAPTK BACU017092/1-754 EQVTVKKFRT WAERRQFNRE MKRKQAESER PILPANQKLI TLSVQDAPTK 501 550 ENSTTRP00000007693/1-772 KEFVINPNGK SEVCILHEYM QRVLKVRPVY NFFECENPGE PFGASVTIDG ENSBTAP00000026474/1-760 KEFVINPNGK SEVCILHEYM QRVLKVRPVY SFFECENPSE PFGASVTIDG ENSP00000263209/1-773 KEFVINPNGK SEVCILHEYM QRVLKVRPVY NFFECENPSE PFGASVTIDG bmy_02438T0/1-511 KEFVINPNGK SEVCILHEYM QRVLKVRPVY NFFECENPSE PFGASVTIDG BACU017092/1-754 KEFVINPNGK SEVCILHEYM QRVLKVRPVY NFFECENPSE PFGASVTIDG 551 600 ENSTTRP00000007693/1-772 VTYGSGTASS KKLAKNKAAR ATLEILIPDF VKQTSEEKPK DSEELEYFNH ENSBTAP00000026474/1-760 VTYGSGTASS KKLAKNKAAR ATLEILIPDF VKQTSEEKPR DSEELEYFNH ENSP00000263209/1-773 VTYGSGTASS KKLAKNKAAR ATLEILIPDF VKQTSEEKPK DSEELEYFNH bmy_02438T0/1-511 VTYGSGTASS KKLAKNKAAR ATLEILIPDF VKQTSEEKPK DSEELEYFNH BACU017092/1-754 VTYGSGTASS KKLAKNKAAR ATLEILIPDF VKQTSEEKPK DSEELEYFNH 601 650 ENSTTRP00000007693/1-772 ISIEDSRVYE LTSKAGLLSP YQILHECLKR NHGMGDTSIK FEVVPGKNQK ENSBTAP00000026474/1-760 ISIEDSRVYE LTSKAGLLSP YQILHECLKR NHGMGDTSIK FEVVPGKNQK ENSP00000263209/1-773 ISIEDSRVYE LTSKAGLLSP YQILHECLKR NHGMGDTSIK FEVVPGKNQK bmy_02438T0/1-511 ISIEDSRVYE LTSKAGLLSP YQILHECLKR NHGMGDTSIK FEVVPGKNQK BACU017092/1-754 ISIEDSRVYE LTSKAGLLSP YQILHECLKR NHGMGDTSIK FEVVPGKNQK 651 700 ENSTTRP00000007693/1-772 SEYVMACGKH TVRGWXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXR ENSBTAP00000026474/1-760 SEYVMACGKH TVRGWCKNKR VGKQLASQKI LQLLHPHVKN WGSLLRMYGR ENSP00000263209/1-773 SEYVMACGKH TVRGWCKNKR VGKQLASQKI LQLLHPHVKN WGSLLRMYGR bmy_02438T0/1-511 SEYVMACGKH TVRGWCKNKR VGKQLASQKI LQLLHPHVKN WGSLLRMYGR BACU017092/1-754 SEYVMACGKH TVRGWCKNKR VGKQLASQKI LQLLHPHVKN WGSLLRMYGR 701 750 ENSTTRP00000007693/1-772 ESSKMVKQET SDKSVIELQQ FARKNKPNLH -LSKLQEEMR RLAEEREETR ENSBTAP00000026474/1-760 ESSKMVKQET SDKSVIELQQ FARKNKPNLH ILSKLQEEMR RLAEEREETR ENSP00000263209/1-773 ESSKMVKQET SDKSVIELQQ YAKKNKPNLH ILSKLQEEMK RLAEEREETR bmy_02438T0/1-511 ESSKMVKQET SDKSVIELQQ FARKNKPNLH ILSKLQEEMR RLAEEREETR BACU017092/1-754 ESSKMVKQET SDKSVIELQQ FARKNKPNLH ILSKLQEEMR RLAEEREETR 751 800 ENSTTRP00000007693/1-772 KKPKMSIVAS AQPGGEPLCT VDV ENSBTAP00000026474/1-760 KKPKMSIVAS AQPGGEPLCT VDV ENSP00000263209/1-773 KKPKMSIVAS AQPGGEPLCT VDV bmy_02438T0/1-511 KKPKMSIVAS AQPGGEPLCT VDV BACU017092/1-754 KKPKMSIVAS AQPGGEPLCT VDV