KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:06 2014 Check: 00 .. Name: ENSP00000281087/1-118 Len: 123 Check: 2372 Weight: 1.00 Name: ENSBTAP00000026498/1-118 Len: 123 Check: 2352 Weight: 1.00 Name: bmy_13433T0/1-95 Len: 123 Check: 4620 Weight: 1.00 Name: BACU001706/1-118 Len: 123 Check: 876 Weight: 1.00 Name: ENSTTRP00000008029/1-123 Len: 123 Check: 3338 Weight: 1.00 // 1 50 ENSP00000281087/1-118 MTSQSQGIHQ LLQAEKRAKD KLEEAKKR-- ---KGKRLKQ AKEEAMVEID ENSBTAP00000026498/1-118 MTSQSQGIHQ LLQAEKRAKD KLEEAKKR-- ---KVRRLRQ AKEEAMAETD bmy_13433T0/1-95 ---------M FVVG------ ---------- ---KAKRLRQ AKEEAMAEID BACU001706/1-118 MTSQSQGIHQ LLQAEKRAKD KLEEAKKR-- ---KAKRLRQ AKEEAMAEID ENSTTRP00000008029/1-123 MTSQSQGIHQ LLQAEKRAKD KLEEAKKKTG SASKAKRLRQ AKEEAMAEID 51 100 ENSP00000281087/1-118 QYRMQRDKEF RLKQSKIMGS QNNLSDEIEE QTLGKIQELN GHYNKYMESV ENSBTAP00000026498/1-118 QYRMQRDEEF RQKQAKIMGS QSNVLEEIEV QTLGKIKELN ASYSMSMEGV bmy_13433T0/1-95 QYRMQRDQEF RQKHAKIMGS QSNISEEIEV QTLEKIKELN GSYNKSMESV BACU001706/1-118 QYRMQRDQEF RQKHAKIMGS QSNISEEIEA QTLEKIKELN GSYNKSMESV ENSTTRP00000008029/1-123 QYRMQRDQEF RQKHAKIMGS QSNISEEIEA QTLEKIKELN GSYNKSMESV 101 150 ENSP00000281087/1-118 MNQLLSMVCD MKPEIHVNYR ATN ENSBTAP00000026498/1-118 INELLSIVCD VKPEIHVNYR ITA bmy_13433T0/1-95 INQLLSIVCD VKPEIHANYR IAN BACU001706/1-118 INQLLSIVCD VKPEIHANYR IAN ENSTTRP00000008029/1-123 INQLLSIVCD VKPEIHANYR IAN