KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:06 2014 Check: 00 .. Name: ENSBTAP00000026500/1-951 Len: 958 Check: 4396 Weight: 1.00 Name: ENSP00000366997/1-958 Len: 958 Check: 5248 Weight: 1.00 Name: ENSTTRP00000003996/1-958 Len: 958 Check: 715 Weight: 1.00 Name: BACU011817/1-840 Len: 958 Check: 8727 Weight: 1.00 Name: bmy_14693T0/1-854 Len: 958 Check: 1965 Weight: 1.00 // 1 50 ENSBTAP00000026500/1-951 MLKSKTFLKK TRAGGVMKIV REHYLRDDIG CGASGCAVCD GAHEGPVLEL ENSP00000366997/1-958 MLKSKTFLKK TRAGGVMKIV REHYLRDDIG CGAPGCAACG GAHEGPALEP ENSTTRP00000003996/1-958 MLKSRTFLKK TRAGGVMKIV REHYLRDDIG CGASGCAACG SAHEGPVLEP BACU011817/1-840 ---------- ------MKIV REHYLRDDIG CGASGCAACG GAHEGTVLEP bmy_14693T0/1-854 MLKSRTFLKK TRAGGVMKIV REHYLRDDIG CGASGCAACG GAHEGSVLEP 51 100 ENSBTAP00000026500/1-951 QPLDRASSLC PQPHYLLPDT NVLLHQIDVL EDPAIRNVIV LQTVLQEVRN ENSP00000366997/1-958 QPQDPASSVC PQPHYLLPDT NVLLHQIDVL EDPAIRNVIV LQTVLQEVRN ENSTTRP00000003996/1-958 QPLDRVSSLC PQPHYLLPDT NVLLHQIDVL EDPAIRNVIV LQTVLQEVRN BACU011817/1-840 QPLDRVSSVC PQPHYLLPDT NVLLHQIDVL EDPAIRNVIV LQTVLQEVRN bmy_14693T0/1-854 RPLDRVSSVC PQPHYLLPDT NVLLHQIDVL EDPAIRNVIV LQTVLQEVRN 101 150 ENSBTAP00000026500/1-951 RSAPVYKRIR DMTNNQEKHF YTFTNEHHRE TYVEQLQGEN SNDRNDRAIR ENSP00000366997/1-958 RSAPVYKRIR DVTNNQEKHF YTFTNEHHRE TYVEQEQGEN ANDRNDRAIR ENSTTRP00000003996/1-958 RSAPVYKRIR DVTNNQEKHF YTFTNEHHRE TYVEQLQGET SNDRNDRAIR BACU011817/1-840 RSAPVYKRIR DVTNNQEKHF YTFTNEHHRE TYVEQLQGES SNDRNDRAIR bmy_14693T0/1-854 RSAPVYKRIR DVTNNQEKHF YTFTNEHHRE TYVEQLQGET SNDRNDRAIR 151 200 ENSBTAP00000026500/1-951 VAAKWYNEHL KNMSAENRLQ VIFITNDRKN KEKAIEEGIP AFTCEEYIKS ENSP00000366997/1-958 VAAKWYNEHL KKMSADNQLQ VIFITNDRRN KEKAIEEGIP AFTCEEYVKS ENSTTRP00000003996/1-958 VAAKWYNEHL KKMSAENQLR VIFITNDRKN KEKAIEEGIP AFTCEEYVKS BACU011817/1-840 VAAKWYNEHL KKMSAENQLR VIFITNDRKN KEKAIEEGIA AFTCEEYVKS bmy_14693T0/1-854 VAAKWYNEHL KKMSAENQLR VIFITNDRKN KEKAVEEGIP AFTCEEYVKS 201 250 ENSBTAP00000026500/1-951 LTANPELIDR LACLSEEGNE IESGKTIFSE HLPLSKLQQG IKSGTYLQGT ENSP00000366997/1-958 LTANPELIDR LACLSEEGNE IESGKIIFSE HLPLSKLQQG IKSGTYLQGT ENSTTRP00000003996/1-958 LTANPELIDR LACLSEEGNE IDSGKIIFSE HLPLSKLQQG IKSGAYLQGT BACU011817/1-840 LTAHPELIDR LACLSEEG-- ---------- ---------- ---------- bmy_14693T0/1-854 LTAHPELIDR LACLSEEGNE IESGKIIFSE HLPLSKLQQG IKSGTYLQGT 251 300 ENSBTAP00000026500/1-951 FRASRENYLE ATVWVHSDDE DNKEILLQGL KNLNRAIHED IVAVELLPKH ENSP00000366997/1-958 FRASRENYLE ATVWIHGDNE ENKEIILQGL KHLNRAVHED IVAVELLPKS ENSTTRP00000003996/1-958 FRASRENYLE ATVWVHGDTE DNKEIILQGL KNLNRAIHED IVAVELLPKN BACU011817/1-840 ---------- ---------- ----IILQGL KNLNRAIHED IVAVELLPKN bmy_14693T0/1-854 FRASRENYLE ATVW------ ----IILQGL KNLNRAIHED IVAVELLPKN 301 350 ENSBTAP00000026500/1-951 QWVAPSSVVL QDEGQNEDDI EKEEERECIL KTAVNEKMLK PTGRVVGIIK ENSP00000366997/1-958 QWVAPSSVVL HDEGQNEEDV EKEEETERML KTAVSEKMLK PTGRVVGIIK ENSTTRP00000003996/1-958 QWVAPSSVVL LDEGQNEDDM EKEEERECIL KTAVSEKMLK PTGRVVGIIR BACU011817/1-840 QWVAPSSVVL LDEGQNEDDM EKEEERERIL KTAVSEKMLK PTGRVVGIIR bmy_14693T0/1-854 QWVAPSSVVL LDEGQNEDDM EKEEEREXIL KTAVSEKMLK PTGRVVGIIR 351 400 ENSBTAP00000026500/1-951 RNWRPYCGML SKSDIKESRR HLFTPADKRI PRIRIETRQA STLEGRRIIV ENSP00000366997/1-958 RNWRPYCGML SKSDIKESRR HLFTPADKRI PRIRIETRQA STLEGRRIIV ENSTTRP00000003996/1-958 RNWRPYCGML SKSDIKESRR HLFTPADKRI PRIRIETRQA STLEGQRIIV BACU011817/1-840 RNWRPYCGML SKSDIKE--- ---------- ---------- ---------- bmy_14693T0/1-854 RNWRPYCGML SKSDIKESRR HLFTPAEKRI PRIRIETRQA STLEGQRIIV 401 450 ENSBTAP00000026500/1-951 AVDGWPRNSR YPNGHFVKNL GEVGDKETET EVLLLEHDVP HQAFSQAVLS ENSP00000366997/1-958 AIDGWPRNSR YPNGHFVRNL GDVGEKETET EVLLLEHDVP HQPFSQAVLS ENSTTRP00000003996/1-958 AIDGWPRNSR YPNGHFVKNL GEVGDKETET EVLLLEHDVP HQPFSQAVLS BACU011817/1-840 ---------- ---GHFVKNL GEVGDKETET EVLLLEHDVP HQPFSQAVLS bmy_14693T0/1-854 AIDGWPRNSR YPNGHFVKNL GEVGDKETET EVLLLEHDVP HQPFSQAVLS 451 500 ENSBTAP00000026500/1-951 FLPKMPWSIT EKDMKNREDL RHLCVCSVDP PGCTDIDDAL HCRELENGNL ENSP00000366997/1-958 FLPKMPWSIT EKDMKNREDL RHLCICSVDP PGCTDIDDAL HCRELENGNL ENSTTRP00000003996/1-958 LLPKMPWSIT EKDMKNREDL RHLCVCSVDP PGCTDIDDAL HCRELENGNL BACU011817/1-840 LLPKMPWCIT EKDMKNREDL RHLCVCSVDP PGCTDIDDAL HCRELENGNL bmy_14693T0/1-854 LLPKMPWSIT EKDMKNREDL RHLCVCSVDP PGCTDIDDAL HCRELENGNL 501 550 ENSBTAP00000026500/1-951 EVGVHIADVS HFIRPGNALD QESARRGTTV YLCEKRIDXF TELVVGNKAS ENSP00000366997/1-958 EVGVHIADVS HFIRPGNALD QESARRGTTV YLCEKRIDMV PELLSSNLCS ENSTTRP00000003996/1-958 EVGVHIADVS YFIRPGNALD QESARRGTTV YLCEKRIDMV PELLSSNLCS BACU011817/1-840 EVGVHIADVS YFIRPGNALD QESARRGTTV YLCEKRIDMV PELLSSNLCS bmy_14693T0/1-854 EVGVHIADVS YFIRPGNALD QESARRGTTV YLCEKRIDMV PELLSSNLCS 551 600 ENSBTAP00000026500/1-951 CETDKE---- SCVNDLNFPS KIL---YEKN LVNIQASLTY AEAQMRIDSA ENSP00000366997/1-958 LKCDVDRLAF SCIWEMNHNA EILKTKFTKS VINSKASLTY AEAQLRIDSA ENSTTRP00000003996/1-958 LRSNVDRLAF SCIWEMNHNA EILKTRFTKS VINSKASLTY AEAQMRIDSA BACU011817/1-840 LRANADRLAF SCIWEMNHNA EILKTRFTKS VINSKASLTY AEAQMRIDSA bmy_14693T0/1-854 LRSNVDRLAF SCIWEMNHNA EILKTRFTKS VINSKASLTY AEAQMRIDSA 601 650 ENSBTAP00000026500/1-951 AMNDNITTSL RGLNKLAKIL KKGRIEKGAL TLSSPEVRFH MDSETHDPID ENSP00000366997/1-958 NMNDDITTSL RGLNKLAKIL KKRRIEKGAL TLSSPEVRFH MDSETHDPID ENSTTRP00000003996/1-958 TMNDSITTSL RGLNKLAKIL KKGRIENGAL TLSSPEVRFH MDSETHDPID BACU011817/1-840 AMNDSITTSL RGLNKLAKIL KKRRIENGAL TLSSPEVRFH MDSETHDPID bmy_14693T0/1-854 AVNDSITTSL RGLNKLAKIL KKRRIENGAL TLSSPEVRFH MDSETHDPID 651 700 ENSBTAP00000026500/1-951 LQTKELRETN SMVEEFMLLA NISVAKKIHE EFSEHALLRK HPAPPPSNYE ENSP00000366997/1-958 LQTKELRETN SMVEEFMLLA NISVAKKIHE EFSEHALLRK HPAPPPSNYE ENSTTRP00000003996/1-958 LQTKELRETN SMVEEFMLLA NISVAKKIHE EFPEHALLRK HPAPPPSNYE BACU011817/1-840 LQTKELRETN SMVEEFMLLA NISVAKKIHE EFSEHALLRK HPAPPPSNYE bmy_14693T0/1-854 LQTKELRETN SMVEEFMLLA NISVAKKIHE EFSEHALLRR HPAPPPSNYE 701 750 ENSBTAP00000026500/1-951 ILVKAAKSKN LEIKTDTAKA LADSLDQADS PIFPYLNTLL RILATRCMMQ ENSP00000366997/1-958 ILVKAARSRN LEIKTDTAKS LAESLDQAES PTFPYLNTLL RILATRCMMQ ENSTTRP00000003996/1-958 ILVKAAKSKN LEIKTDTAKA LADSLDRADS LTFPYLNTLL RILATRCMMQ BACU011817/1-840 ILVKAGKSKN LEIKTDTAKA LADSLDRADS PTFPYLNTLL RILATRCMMQ bmy_14693T0/1-854 ILVKAGKSKN LEIKTDTAKA LADSLDRADS PTFPYLNTLL RILATRCMMQ 751 800 ENSBTAP00000026500/1-951 AVYFCSGMDN DFHHYGLASP IYTHFTSPIR RYADIIVHRL LAVAIGADCT ENSP00000366997/1-958 AVYFCSGMDN DFHHYGLASP IYTHFTSPIR RYADVIVHRL LAVAIGADCT ENSTTRP00000003996/1-958 AVYFCSGMDT DFHHYGLASP IYTHFTSPIR RYADIIVHRL LAVAVGADCT BACU011817/1-840 AVYFCSGMDT DFHHYGLASP IYTHFTSPIR RYADIIVHRL LAVAVGADCT bmy_14693T0/1-854 AVYFCSGMET DFHHYGLASP IYTHFTSPIR RYADIIVHRL LAVAVGADCT 801 850 ENSBTAP00000026500/1-951 YPELTDKHKL ADLCKNLNFR HKMAQYAQRA SVAFHTQLFF KSKGIVSEEA ENSP00000366997/1-958 YPELTDKHKL ADICKNLNFR HKMAQYAQRA SVAFHTQLFF KSKGIVSEEA ENSTTRP00000003996/1-958 YPELTDKHKL AEVCKNLNFR HKMAQYAQRA SVAFHTQLFF KSKGIVSEEA BACU011817/1-840 YPELTDKHKL ADLCKNLNFR HKMAQYAQRA SVSFHTQLFF KSKGIVSEEA bmy_14693T0/1-854 YPELTDKHKL ADLCKNLNFR HKMAQYAQRA SVAFHT---- ---------- 851 900 ENSBTAP00000026500/1-951 YILFVRKNAI VVLIPKYGLE GTVFFEEKDK PNPRLIYDDE IPSLKIEDTV ENSP00000366997/1-958 YILFVRKNAI VVLIPKYGLE GTVFFEEKDK PNPQLIYDDE IPSLKIEDTV ENSTTRP00000003996/1-958 YILFVRKNAL VVLIPKYGLE GTVFFEEKDK PKPRLTYDDE IPSLKIEDTV BACU011817/1-840 YILFVRKNAI VVLIPKYGLE GTVFFEEKDK PKPRLTYDDE IPSLKIEDTV bmy_14693T0/1-854 ---------- ---------- ---------- ---------- ---------- 901 950 ENSBTAP00000026500/1-951 FHVFDKVKVK IMLDSSNLQH QKIRMSLVEP QIPGISVSAD TSNMDINEPE ENSP00000366997/1-958 FHVFDKVKVK IMLDSSNLQH QKIRMSLVEP QIPGISIPTD TSNMDLNGPK ENSTTRP00000003996/1-958 FHIFDKVKVK IMLDSSNLQH QKIRMSLVEP QIPGISVPTD TSNMDISEPE BACU011817/1-840 FHIFDKVKVK IMLDSSNLQH QKIRMSLVEP QIPGISVPTD TSNMDISEPE bmy_14693T0/1-854 ---------- ---------- ---------- QIPGISVPTD TSNMDISEPE 951 1000 ENSBTAP00000026500/1-951 RKKKKLQK ENSP00000366997/1-958 KKKMKLGK ENSTTRP00000003996/1-958 TKKKKLQK BACU011817/1-840 RKKKKLQK bmy_14693T0/1-854 RKKKKLQK