KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:11 2014 Check: 00 .. Name: ENSP00000337332/1-355 Len: 359 Check: 3863 Weight: 1.00 Name: ENSBTAP00000026521/1-359 Len: 359 Check: 1270 Weight: 1.00 Name: ENSTTRP00000001595/1-245 Len: 359 Check: 8906 Weight: 1.00 Name: bmy_15838T0/1-287 Len: 359 Check: 4748 Weight: 1.00 Name: BACU002615/1-343 Len: 359 Check: 303 Weight: 1.00 // 1 50 ENSP00000337332/1-355 MSVNYAAGLS PYADKGKCGL PEIFDPPEEL ERKVWELARL VWQSSSVVFH ENSBTAP00000026521/1-359 MSVNYAAGLS PYADKGKCGL PEVFDPPEEL EQKVWELAQL IWQSSSVVFH ENSTTRP00000001595/1-245 MSVNYAAGLS PYADKGKCGL PEVFDPPEEL ERKVWELAQL VWQSSNVVFH bmy_15838T0/1-287 MSVNYAAGLS PYADKGKCGL PE-------- ---VWELAQL VWQSSNVVFH BACU002615/1-343 MSVNYAAGLS PYADKGKCGL PEVFDPPEDL ERKVWELAQL VWQSSNVVFH 51 100 ENSP00000337332/1-355 TGAGISTASG IPDFRGPHGV WTMEERGLAP KFDTTFESAR PTQTHMALVQ ENSBTAP00000026521/1-359 TGAGISTASG IPDFRGPHGV WTMEERGLAP TFDTTFENAQ PTKTHMALVQ ENSTTRP00000001595/1-245 TGAGISTASG IPDFRGPHGV WTMEEQGLAP KFDTTFENAR PTKTHMALVQ bmy_15838T0/1-287 TGAGISTASG IPDF------ ---------- ---------- ---------- BACU002615/1-343 TGAGISTASG IPDFRGPHGV WTMEEQGLAP KFDTTFENAR PTKTHMALVQ 101 150 ENSP00000337332/1-355 LERVGLLRFL VSQNVDGLHV RSGFPRDKLA ELHGNMFVEE CAKCKTQYVR ENSBTAP00000026521/1-359 LERVGLLHFL VSQNVDGLHV RSGFPRDKLA ELHGNMFIEE CVKCKMQYVR ENSTTRP00000001595/1-245 LERVGLLRFL VSQNVDGLHV RSGFPRDKLA ELHGNMFVEE CVKCKMQYVR bmy_15838T0/1-287 ---------- ---------- -----RDKLA ELHGNMFVEE CVKCKTQYVR BACU002615/1-343 LERVGLLRFL VSQNVDGLHV RSGFPRDKLA ELHGNMFVEE CVKCKTQYVR 151 200 ENSP00000337332/1-355 DTVVGTMGLK ATGRLCTVAK ARGLRACRGE LRDTILDWED SLPDRDLALA ENSBTAP00000026521/1-359 DTVVGSMGLK PTGRLCTVAK SRGLRACRGE LRDTILDWED SLPDRDLTLA ENSTTRP00000001595/1-245 DTVVGSMGLK ATGRLCTVAK SRGLRACRGE LRDTILDWED SLPDRDLTLA bmy_15838T0/1-287 DTVVGSMGLK ATGRLCTVAK SRGLRACRGE LRDTILDWED SLPDRDLTLA BACU002615/1-343 DTVVGSMGLK ATGRLCTVAK SRGLRACRGE LRDTVLDWED SLPDRDLTLA 201 250 ENSP00000337332/1-355 DEASRNADLS ITLGTSLQIR PSGNLPLATK RRGGRLVIVN LQPTKHDRHA ENSBTAP00000026521/1-359 DEASRNADLS ITLGTSLQIR PSGNLPLATK RRGGRLVIVN LQPTKHDRHA ENSTTRP00000001595/1-245 DEASRNADLS ITLGTSL-IR PSGNLPLATK RHGGGLVIVN LQPTKH---- bmy_15838T0/1-287 DEASRNADLS ITLGTSLQIR PSGNLPLATK RRGGRLVIVN LQPTKHDRHA BACU002615/1-343 DEASRNADLS ITLGTSLQIR PSGNLPLATK RRGGRLVIVN LQPTKHDRHA 251 300 ENSP00000337332/1-355 DLRIHGYVDE VMTRLMKHLG LEIPAWDGPR VLERALPPLP RPPTPKLEPK ENSBTAP00000026521/1-359 DLRIHGYVDE VMTRLMKHLG LEIPAWDGPH MVERALPPLP RPPAPKLEPK ENSTTRP00000001595/1-245 ---------- ---------- ---------- ---------- ---------- bmy_15838T0/1-287 DLRIHGYVDE VMTRLMKHLG LEIPAWDGPR VLERALPPLP RPPTPKLEPK BACU002615/1-343 DLRIHGYVDE VMTRLMKHLG LEIPAWDGPR ---------- ------LEPK 301 350 ENSP00000337332/1-355 EESPTRINGS IPAGPKQ--- -EPCAQHNGS EPASPKRERP TSPAPHRPPK ENSBTAP00000026521/1-359 EEASPQLNSP VPANPKQEPT AEPCTQHNGS GPTSPKRERP DSPSPHRPPK ENSTTRP00000001595/1-245 ---------- ---------- ---------- ---------- ---------- bmy_15838T0/1-287 EEAPAQLHSP APASPKQEPT AEPGAQHNGS GPASPKRERL DSPAPRRPPK BACU002615/1-343 EEAPAQLHSP APASPKQEPT AEPGAQHNGS GPASPKRELL DSPAPRRPPK 351 400 ENSP00000337332/1-355 RVKAKAVPS ENSBTAP00000026521/1-359 RVKTEVVPS ENSTTRP00000001595/1-245 --------- bmy_15838T0/1-287 RVKTEVVPS BACU002615/1-343 RVKTEVVPS