KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:16 2014 Check: 00 .. Name: ENSTTRP00000003512/1-298 Len: 438 Check: 5739 Weight: 1.00 Name: ENSP00000260130/1-298 Len: 438 Check: 7919 Weight: 1.00 Name: BACU002312/1-438 Len: 438 Check: 6617 Weight: 1.00 Name: ENSBTAP00000026526/1-298 Len: 438 Check: 6854 Weight: 1.00 Name: bmy_11860T0/1-309 Len: 438 Check: 2389 Weight: 1.00 // 1 50 ENSTTRP00000003512/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000260130/1-298 ---------- ---------- ---------- ---------- ---------- BACU002312/1-438 MGSGSPDRAR RRKAWAEGAG GRRGRAARGG GFSGAHRPLL SGSRKSEPVT ENSBTAP00000026526/1-298 ---------- ---------- ---------- ---------- ---------- bmy_11860T0/1-309 ---------- ---------- ---------- ---------M MEPLSSAQMQ 51 100 ENSTTRP00000003512/1-298 ---------- -------MSL YPSLEDLKVD KVIQAQAAFS ANPANPAILS ENSP00000260130/1-298 ---------- -------MSL YPSLEDLKVD KVIQAQTAFS ANPANPAILS BACU002312/1-438 GGGCSAWVPA ASENPAKMSL YPSLEDLKVD KVIQAQTAFS ANPANPAILS ENSBTAP00000026526/1-298 ---------- -------MSL YPSLEDLKVD KVIQAQTAFS ANPANPAILS bmy_11860T0/1-309 CTVGLLVVEG TQENPAKMSL YPSLEDLKVD KVIQAQTAFS ANPANPAILS 101 150 ENSTTRP00000003512/1-298 EASAPVSQDG NLYPKLYPEL SQYMGLSLNE EEMRANMAVV PGAPSQG--- ENSP00000260130/1-298 EASAPIPHDG NLYPRLYPEL SQYMGLSLNE EEIRANVAVV SGAPLQG--- BACU002312/1-438 EASAPISQDG NLYPKLYPEL SQYMGLSLNE EEICANMAMV PGAPSQGENP ENSBTAP00000026526/1-298 EASAPVSQDG NLYPKLYPEL SQYMGLSLNE EEIRANMALV PGAPSQG--- bmy_11860T0/1-309 EASAPISQDG NLYPKLYPEL SQYMGLSLNE EEIRANMAMV PGAPSQG--- 151 200 ENSTTRP00000003512/1-298 ---------- ---------X XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000260130/1-298 ---------- ---------Q LVARPSSINY MVAPVTGNDV GIRRAEIKQG BACU002312/1-438 AKMSLYPSLE DLKVDKVIQQ LVARASSMNY MVAPVTGNDT GIRRAEIKQG ENSBTAP00000026526/1-298 ---------- ---------Q VVARPSSMNH MVAPITGGDI GIRRAEIKQG bmy_11860T0/1-309 ---------- ---------Q LVARASSMNY MVAPVTGNDT GIRRAEIKQG 201 250 ENSTTRP00000003512/1-298 XXXXXXXXXX XXXXXXXXXX XXXGIFVQLV QANSPSSLVG LRFGDQVLQI ENSP00000260130/1-298 IREVILCKDQ DGKIGLRLKS IDNGIFVQLV QANSPASLVG LRFGDQVLQI BACU002312/1-438 IREVILCKDQ DGKIGLRLKS IDNGVFVQLV QANSPSSLVG LRFGDQVLQI ENSBTAP00000026526/1-298 IREVILCKDQ DGKIGLRLKS IDNGIFVQLV QANSPSSLVG LRFGDQVLQI bmy_11860T0/1-309 IREVILCKDQ DGKIGLRLKS IDNGVFVQLV QANSPSSLVG LRFGDQVLQI 251 300 ENSTTRP00000003512/1-298 NGENCAGWSS DRAHKVLKQA FGEKITMTIR DRPFERTITM HKDSTGHVGF ENSP00000260130/1-298 NGENCAGWSS DKAHKVLKQA FGEKITMTIR DRPFERTITM HKDSTGHVGF BACU002312/1-438 NGENCAGWSS DRAHKVLKQA FGEKITMTIR DRPFERTITM HKDSTGHVGF ENSBTAP00000026526/1-298 NGENCAGWSS DRAHKVLKQA FGEKITMTIR DRPFERTITM HKDSTGHVGF bmy_11860T0/1-309 NGENCAGWSS DRAHKVLKQA FGEKITMTIR DRPFERTITM HKDSTGHVGF 301 350 ENSTTRP00000003512/1-298 VFKNGKIASI VKDSSAARNG LLTEHNICEV NGQNVIGLKD SQIADILSTA ENSP00000260130/1-298 IFKNGKITSI VKDSSAARNG LLTEHNICEI NGQNVIGLKD SQIADILSTS BACU002312/1-438 VFKNGKITSI VKDSSAARNG LLTEHSICEV NGQNVIGLKD SQIADILSTA ENSBTAP00000026526/1-298 VFKNGKITSI VKDSSAARNG LLTEHNICEV NGQNVIGLKD SQIADILSTA bmy_11860T0/1-309 VFKNGKITSI VKDSSAARNG LLTEHSICEV NGQNVIGLKD SQIADILSTA 351 400 ENSTTRP00000003512/1-298 GNVVTITIMP AFIFEHIIKR MAPS------ IMKSLMDHTI PEV------- ENSP00000260130/1-298 GTVVTITIMP AFIFEHIIKR MAPS------ IMKSLMDHTI PEV------- BACU002312/1-438 GNVVTITIMP AFIFEHIIKR KATQGTFLSL TLPRSLDFSL KTVPEAQDDG ENSBTAP00000026526/1-298 GNIVTITIMP AFIFEHIIKR MAPS------ IMKSLMDHTI PEV------- bmy_11860T0/1-309 GNVVTITIMP AFIFEHIIKR ---------- ---------- ---------- 401 450 ENSTTRP00000003512/1-298 ---------- ---------- ---------- -------- ENSP00000260130/1-298 ---------- ---------- ---------- -------- BACU002312/1-438 HDARYGFLEG SVLEGPSTLL INHLNEKMET AFITEKYF ENSBTAP00000026526/1-298 ---------- ---------- ---------- -------- bmy_11860T0/1-309 ---------- ---------- ---------- --------