KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:29:18 2014 Check: 00 .. Name: ENSTTRP00000005029/1-770 Len: 781 Check: 6931 Weight: 1.00 Name: ENSBTAP00000026534/1-781 Len: 781 Check: 2494 Weight: 1.00 Name: bmy_04577T0/1-754 Len: 781 Check: 4688 Weight: 1.00 Name: BACU007293/1-742 Len: 781 Check: 2260 Weight: 1.00 // 1 50 ENSTTRP00000005029/1-770 MAPHRSALLD ALVLALCALS PPARAATASR -GVTQ----- -----ARPSS ENSBTAP00000026534/1-781 MAAHRCALLG ALVLALGALS QPARLATPAR PGATQARAPQ GRVTEARPGS bmy_04577T0/1-754 MAPHRSALLG ALVLALCALS PPARAATASR -GAPQVRAPQ GRVTQARPSS BACU007293/1-742 MAPHCSALLG ALVLALCALS PPARAATASR -GAPQ----- -------PSS 51 100 ENSTTRP00000005029/1-770 MVVEHPEFLN AGKEPGLQIW RVEKFDLVPV PRKLYGDFFT GDAYVILKTV ENSBTAP00000026534/1-781 MVVEHPEFLK AGKEPGLQIW RVEKFDLVPV PPNLYGDFFT GDAYVILKTV bmy_04577T0/1-754 MVVEHPEFLK AGKEPGLQIW RVEKFDLVPV PPNLYGDFFT GDAYVILKTV BACU007293/1-742 MVVEHPEFLK AGKEAGLQIW RVEKFDLVPV PPNLYGDFFT GDAYVILKTV 101 150 ENSTTRP00000005029/1-770 KLRSGNLQYD LHYWLGNECS QDESGAAAIF TVQLDDYLNG RAVQHREVQG ENSBTAP00000026534/1-781 QLRNGNLQYD LHYWLGNECS QDESGAAAIF TVQLDDYLNG RAVQHREVQG bmy_04577T0/1-754 QLRNGNLQYD LHYWLGNECS QDESGAAAIF TVQLDDYLNG RAVQHREVQG BACU007293/1-742 QLRNGNLQYD LHYWLGNECS QDESGAAAIF TVQLDDHLNG RAVQHREVQG 151 200 ENSTTRP00000005029/1-770 FESATFLGYF KHGLKYKKGG VASGFKHVVP NEVVVQRLFQ VKGRRVVRGT ENSBTAP00000026534/1-781 FESATFLGYF KSGLKYKKGG VASGFKHVVP NEVVVQRLFQ VKGRRVVRAT bmy_04577T0/1-754 FESATFLGYF KSGLKYKKGG VASGFKHVVP NEVMVQRLFQ VKGRRAVRAT BACU007293/1-742 FESATFLGYF KSGLKYKKGG VASGFKHVVP NEVMVQRLFQ VKGRRAVRAT 201 250 ENSTTRP00000005029/1-770 EVPVSWESFN NGDCFILDLG NDIYQWCGSK SNRFERLKAT ELSKGIRDNE ENSBTAP00000026534/1-781 EVPVSWESFN NGDCFILDLG NDIYQWCGSS SNRFERLKAT QVSKGIRDNE bmy_04577T0/1-754 EVPVSWESFN NGDCFILDLG NDIYQWCGSE SNRFERLKAT QVSKGIRDNE BACU007293/1-742 EVPVSWESFN NGDCFILDLG NDIYQWCGSE SNRFERLKAT QMSKGIRDNE 251 300 ENSTTRP00000005029/1-770 QNGRARVHVS EEGSEPEAML QVLGPKPALP EGTEDTAKED AANRKLAKLY ENSBTAP00000026534/1-781 RSGRARVHVS EEGAEPEAML EVLGPKPALP AGTEDTAKED AANRKLAKLY bmy_04577T0/1-754 RSGRAHVHVS EEGSEPEAML QVLGPKPALP KGAEDTAKED AANRKLAKLY BACU007293/1-742 RSGRAHVHVS EEGSEPEAML QVLGPKPALP KGAEDTAKED AANRKLAKLY 301 350 ENSTTRP00000005029/1-770 KVSNGAGTMS VSLVADENPF AQGALKSEDC FILDHGKDGK IFVWKGRQAN ENSBTAP00000026534/1-781 KVSNGAGTMS VSLVADENPF AQGALRSEDC FILDHGKDGK IFVWKGRQAN bmy_04577T0/1-754 KVSNGAGTML VSLVADENPF AQGALKSEDC FILDHGKDGK IFVWKGRQAN BACU007293/1-742 KVSNGAGTML VSLVADENPF AQGALKSEDC FILDHGKDGK IFVWKGRQAN 351 400 ENSTTRP00000005029/1-770 TEERKAALKT ASDFISKMNY PKQTQVSVLP EGGETPLFKQ FFKNWRDLDQ ENSBTAP00000026534/1-781 TEERKAALKT ASDFISKMDY PRQTQVSVLP EGGETPLFKQ FFKNWRDPDQ bmy_04577T0/1-754 MEERKAALKT ASDFISKMDY PKQTQVSVLP EGGETPLFKQ FFKNWRDLDQ BACU007293/1-742 MEERKAALKT ASDFISKMHY PKQTQVSVLP EGGETPLFKQ FFKNWRDLDQ 401 450 ENSTTRP00000005029/1-770 TDGLGLTYLS SHIANIERVP FDAATLHTST AMAAQHGMDD NGTGQKQIWR ENSBTAP00000026534/1-781 TDGPGLSYLS SHIANVERVP FDAATLHTST AMAAQHGMDD DGRGQKQIWR bmy_04577T0/1-754 TDGLGLTYLS SHIANMERVP FDAATLHTST AMAAQHGMDD DGTGQKQIWR BACU007293/1-742 TDGLGLPYLS SHIANMERVP FDAATLHTST AMAAQHGMDD DGTGQKQIWR 451 500 ENSTTRP00000005029/1-770 IEGSNKVPVD PATYGQFYGG DSYIILYNYR HGGRQGQIIY NWQGAQSTQD ENSBTAP00000026534/1-781 IEGSDKVPVD PATYGQFYGG DSYIILYNYR HGGRQGQIIY NWQGAQSTQD bmy_04577T0/1-754 IEGSNKVPVD PATYGQFYGG DSYIILYNYR HGGRQGQIIY NWQGAQSTQD BACU007293/1-742 IEGSNKVPVD PATYGQFYGG DSYIILYNYR HGGRQGQIIY NWQGAQSTQD 501 550 ENSTTRP00000005029/1-770 EVAASAILTA QLDEELGGTP VQSRVVQGKE PAHLMSLFGG KPMIVYRGGT ENSBTAP00000026534/1-781 EVAASAILTA QLDEELGGTP VQSRVVQGKE PAHLMSLFGG KPMIIYRGGT bmy_04577T0/1-754 EVAASAILTA QLDEELGGTP VQSRVVQGKE PAHLMSLFGG KPMIVYRGGT BACU007293/1-742 EVATSAILTA QLDEELGGTP VQSRVVQGKE PAHLMSLFGG KPMIIYRGGT 551 600 ENSTTRP00000005029/1-770 SREGGQTAPA STRLFQVRAS SSGATRAVEV IPKAGVLNSN DAFVLKTPSA ENSBTAP00000026534/1-781 SREGGQTAPA STRLFQVRAS SSGATRAVEV MPKAGALNSN DAFVLKTPSA bmy_04577T0/1-754 SREGGQTAPA STRLFQVRAS SSGATRAVEV IPKAGVLNSN DAFVLKTPSA BACU007293/1-742 SREGGQTAPA STRLFQVRAS SSGATRAVEV IPKAGVLNSN DAFVLKTPSA 601 650 ENSTTRP00000005029/1-770 AYLWVGTGAS QAEKTGAQEL LQVLRAQPVQ VAEGSEPXXX XXXXXXXXXX ENSBTAP00000026534/1-781 AYLWVGAGAS EAEKTGALEL LRVLRAQPVQ VAEGSEPDSF WEALGGKAAY bmy_04577T0/1-754 AYLWVGTGAS EAEKTGAQEL LQVLRAQPVQ VAEGSEPDSF WEALGGKAAY BACU007293/1-742 AYLWVGTGAS EAEKTGAQEL LQVLRAQPVQ VAEGSEPDSF WEALGGKAAY 651 700 ENSTTRP00000005029/1-770 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXI EEVPGELMQE DLATDDVMLL ENSBTAP00000026534/1-781 RTSPRLKDKK MDAHPPRLFA CSNKIGRFVI EEVPGELMQE DLATDDVMLL bmy_04577T0/1-754 RTSPRLKDKK MDAHPPRLFA CSNKIGRFV- ---------- ---------- BACU007293/1-742 RTSPRLKDKK MDVHPPRLFA CSNRIGRFV- ---------- ---------- 701 750 ENSTTRP00000005029/1-770 DIWDQVFVWV GKDSQEEEKT EALTSAKRYI ETDPANRDRR TPITMVKQGF ENSBTAP00000026534/1-781 DTWDQVFVWV GKDSQEEEKT EALTSAKRYI ETDPANRDRR TPITVVKQGF bmy_04577T0/1-754 -----VFVWV GKDSQEEEKT EALTSAKRYI ETDPANRDRR TPITMVKQGF BACU007293/1-742 -----VFVWV GKDSQEEEKT EALTSAKRYI ETDPANRDRR TPITMVKQGF 751 800 ENSTTRP00000005029/1-770 EPPSFVGWFL GWDDSYWSMD PLDRALAELA A ENSBTAP00000026534/1-781 EPPSFVGWFL GWDDNYWSVD PLDRALAELA A bmy_04577T0/1-754 EPPSFVGWFL GWDDNYWSVD PLDRALAELA A BACU007293/1-742 EPPSFVGWFL GWDDNYWSVD PLDRALAELA A