KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:21 2014 Check: 00 .. Name: ENSBTAP00000026537/1-506 Len: 509 Check: 9019 Weight: 1.00 Name: ENSP00000459043/1-508 Len: 509 Check: 4703 Weight: 1.00 Name: ENSTTRP00000010625/1-501 Len: 509 Check: 8848 Weight: 1.00 Name: bmy_02750T0/1-507 Len: 509 Check: 8732 Weight: 1.00 Name: BACU009181/1-423 Len: 509 Check: 9537 Weight: 1.00 // 1 50 ENSBTAP00000026537/1-506 MNSPEGPSFP AGLLSGGASP SGDEGFFPFV LERRDSFLGG GPGPEEPEDL ENSP00000459043/1-508 MSSPDGPSFP SGPLSGGASP SGDEGFFPFV LERRDSFLGG GPGPEEPEDL ENSTTRP00000010625/1-501 MSSPEGPSFP SGLLSRGTSP SSNEGFFPFM LERRDSFLGG GPRPEEPEDL bmy_02750T0/1-507 MSSPEGPSFP SGLLSGGTSP SGNEGFFPFV LEQRDSFLGG GPRPEEPEDL BACU009181/1-423 MSSPEGPSFP SGLLSGGTSP SGNEGFFPFM LEQRDSFLGG GPRPEEPEDL 51 100 ENSBTAP00000026537/1-506 ALQLQQKEKD LLLAAELGKM LLERNEELQR QLDTLNAQRA EREEQLQQEN ENSP00000459043/1-508 ALQLQQKEKD LLLAAELGKM LLERNEELRR QLETLSAQHL EREERLQQEN ENSTTRP00000010625/1-501 ALQLQQKEKD LLLAAELGKM LLERNEELQR RLEMLSAQHS EHEERLQQEN bmy_02750T0/1-507 ALQLQQKEKD LLLAAELGKM LLERNEELQR QLEMLSAQHS EHEERLQQEN BACU009181/1-423 ALQLQQKEKD LLLAAELGKM LLERNEELQR RLEMLSAQHS EHEERLQQEN 101 150 ENSBTAP00000026537/1-506 HELRRGLAAR GAEWEARAVE LERDVEALRA QLGEQRSEQQ DSGRERARAL ENSP00000459043/1-508 HELRRGLAAR GAEWEARAVE LEGDVEALRA QLGEQRSEQQ DSGRERARAL ENSTTRP00000010625/1-501 HELRR-LAAR GAEWEARTVE LEGDVEALRA QLGEQRSEQQ DSGRERARAL bmy_02750T0/1-507 HELRRGLAAR GAEWEARTVE LEGDVEALRA QLGEQRSEQQ DSGRERARAL BACU009181/1-423 HELRRGLAAR GAEWEARIVE LEGDVEALRA QLGEQRSEQQ DSGRERARNL 151 200 ENSBTAP00000026537/1-506 SELGEQNLRL SQQLAQASQT EQELQRELDS LQGQCQAQAL AGAELRTRLE ENSP00000459043/1-508 SELSEQNLRL SQQLAQASQT EQELQRELDA LRGQCQAQAL AGAELRTRLE ENSTTRP00000010625/1-501 SELSEQNLQL SQQLAQASQT EQELQRELDG LRGQCQAQAL AGAELRTRLE bmy_02750T0/1-507 SELSEQNLRL SQQLAQASQT EQELQRELDG LRGQCQAQAL AGAELRTRLE BACU009181/1-423 RELSEQNLRL SQQLAQASQT EQELQRELDG LRGQCQAQAL AGAELRTRLE 201 250 ENSBTAP00000026537/1-506 SLQGENQMLQ SRRQDLEAQI RGLREELEKG RGKLQVTHEE LLLLRRERRE ENSP00000459043/1-508 SLQGENQMLQ SRRQDLEAQI RGLREEVEKG EGRLQTTHEE LLLLRRERRE ENSTTRP00000010625/1-501 CLQGENQMLQ SRRQDLEAQI RGLCEEVEKG QGRLQATHEE LLLLRRERHE bmy_02750T0/1-507 CLQGENQMLQ TRRQDLEAQI RGLCEEVEKG QGRLQATHEE LLLLRRERRE BACU009181/1-423 CLQGENQMLQ TRRQDLEAQI RGLCEEVEKG QGRLQATHEE LLLLQLERRE 251 300 ENSBTAP00000026537/1-506 HGLELERARS ETEEALSALR RLQRRVSELE EESRLQDADL SGASLQLELA ENSP00000459043/1-508 HSLELERARS EAGEALSALR RLQRRVSELE EESRLQDADV SAASLQSELA ENSTTRP00000010625/1-501 HSLELELARS EAGEALSALR RLQRRVSELE EESRLQDANI SGASLQSELA bmy_02750T0/1-507 HSLELELARS EAGEALSALR RLQRRVSELE EESRLQDANI SGASLQLELA BACU009181/1-423 HSLELELARS EVGEALSALR RLQRRVSELE EESRLQDANI SGASLQLELA 301 350 ENSBTAP00000026537/1-506 HSLDSDQDQN QNTDRSGGAL TTLSPETQEA SSQQRSPEEE RLEPPRKGTS ENSP00000459043/1-508 HSLD-DGDQG QGADAPGDTP TTRSPKTRKA SSPQPSPPEE ILEPPKKRTS ENSTTRP00000010625/1-501 HSLD-SKDQD QNADKGGGE- ATLPPETQEA SSHQPSPQEE RLEPPRKRAS bmy_02750T0/1-507 HSLDSDKDQD QNADRRGDAL ATLSPETQEA SSHQPSPQEE RLEPPRKRAS BACU009181/1-423 HSLDSDKDQD QNTDRRGDAL ATLSSETQEA SSHQPSPQEQ RLEPPRKRAS 351 400 ENSBTAP00000026537/1-506 LSPEEILGEE EEEVFRLQVE MAMQQAELQS LREELQRQKE LRVQ-DPEEA ENSP00000459043/1-508 LSPAEILEEK EVEVAKLQDE ISLQQAELQS LREELQRQKE LRAQEDPGEA ENSTTRP00000010625/1-501 LSPAETLEEK EAEVVRLQDE ---RRAGVQS LREELQRQKE LRAQEDPEEI bmy_02750T0/1-507 LSPAEILEEK EAEVVRLQDE MALQGEELRS LREELQRQKE LRAHEDPEEV BACU009181/1-423 LSPAEILEEK EAEVVRLQDE ---------- ---------- ---------- 401 450 ENSBTAP00000026537/1-506 LSSALSDRDE AMNKVLELSL ELSRVSLERD SLSRELLRTI RQKVALTQEL ENSP00000459043/1-508 LHSALSDRDE AVNKALELSL QLNRVSLERD SLSRELLRAI RQKVALTQEL ENSTTRP00000010625/1-501 LSGALSDRDE AVNKSLELAL ELSRVSLERD SLSRELLRTI RQKVALTQEL bmy_02750T0/1-507 LSGALSDRDE AVNKSLELSL ELSRVSLERD SLSRELLRTI RQKVALTQEL BACU009181/1-423 ---------- ---------- ---------- ---------- ---------- 451 500 ENSBTAP00000026537/1-506 EAWQDDMQVV IGQQLRSQRQ QELSAATSA- -PRPAPTRFS LRLSPGPAGG ENSP00000459043/1-508 EAWQDDMQVV IGQQLRSQRQ KELSASASSS TPRRAAPRFS LRLGPGPAGG ENSTTRP00000010625/1-501 EAWQDDMQVV IGQQLRSQRQ KELSAAGSA- -PSRNPPRLS LRLGPGPAGG bmy_02750T0/1-507 EAWQDDMQVV IGQQLLSQRQ KELSAAGSA- -PSRAPPRFS LRLGPGPAGG BACU009181/1-423 ----DDMQVV IGQQLLSQRQ KELSVAGSA- -PSRAPPRFS LRLGPGPAGG 501 550 ENSBTAP00000026537/1-506 FFSTLFRRT ENSP00000459043/1-508 FLSNLFRRT ENSTTRP00000010625/1-501 FFSNLFRRT bmy_02750T0/1-507 FFSNLFRRT BACU009181/1-423 FFSNLFRRT