KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:22 2014 Check: 00 .. Name: ENSP00000318770/1-271 Len: 290 Check: 6182 Weight: 1.00 Name: ENSBTAP00000026547/1-261 Len: 290 Check: 6426 Weight: 1.00 Name: BACU012508/1-251 Len: 290 Check: 3911 Weight: 1.00 Name: ENSTTRP00000006655/1-271 Len: 290 Check: 5569 Weight: 1.00 Name: bmy_18040T0/1-290 Len: 290 Check: 2454 Weight: 1.00 // 1 50 ENSP00000318770/1-271 MSPLLGLRSE LQDTCTSLGL MLSVVLLMGL ARVVARQQLH RPVAHAFVLE ENSBTAP00000026547/1-261 MTALRGLWPE MQDTCTSLGL MLSIVLFTGL ARVVTRQQLN GPMAHAFVLE BACU012508/1-251 MTALRGLWPE MQDTCTSLGL MLSIVLFMGL ARVVTRQQLN RPTAHAFVLE ENSTTRP00000006655/1-271 MTALRGLWPE MQDTCISLGL MLSIVLFMGL ARVVTRQQLN RPTAHAFVLE bmy_18040T0/1-290 MTALRGLWPE MQDTCTSLGL MLSIVLFMGL ARVVTRQQLN RPTAHAFVLE 51 100 ENSP00000318770/1-271 FLATFQLCCC THELQLLSEQ HPAHPTWTLT LVYFFSLVHG LTLVGTSSNP ENSBTAP00000026547/1-261 FLATFQLCFC THELQLLSEQ EPLHPTWPLT LIYFFSMVHG LTLVGTSSNP BACU012508/1-251 FLATFQLCFC THELQVLSEQ EPLHPTWPLT LTYFFSLVHG LTLVGTSSNP ENSTTRP00000006655/1-271 FLATFQLCFC THELQLLSEQ EPLHPTWPLT LTYFFSLVHG LTLVGTSSNP bmy_18040T0/1-290 FLATFQLCFC THELQVLSEQ EPLHPTWPLT LTYFFSLVHG LTLVGTSSNP 101 150 ENSP00000318770/1-271 CGVMMQMMLG GMSPETGAVR LLAQLVSALC SRYCTSALWS LGLTQYHVSE ENSBTAP00000026547/1-261 CGVMMQIMLG GMSAETGAIR LLAQLIGALC SRYCMSALWS LGLTKYHVSE BACU012508/1-251 CGVMMQMMLG GMSAETGAMR LLAQLIGALC SRYCMGALWS LGLTKYHVSE ENSTTRP00000006655/1-271 CGVMMQMMLG GMSAETGAMR LLAQLIGALC SRYCMGALWS LGLTKYHVSE bmy_18040T0/1-290 CGVMMQMMLG GMTAETGAMR LLAQLIGALC SRYCMGALWS LGLTKYHVSE 151 200 ENSP00000318770/1-271 RSFACKNPIR VDLLKAVITE AVCSFLFHSA LLHFQEVRTK LRIHLLAALI ENSBTAP00000026547/1-261 RSFACRNPIQ VDLPKAVIIE AVCSFIFHSA LLHFQEVRTK LRIHLLSALI BACU012508/1-251 RSFACRNPIQ VDLPKAVIIE AVSSFIFHSA LLHFQEVRTK LRIHLLSALI ENSTTRP00000006655/1-271 RSLACRNPIQ VDLPKAVIIE AVSSFIFHSA LLHFQEVRTK LRIHLLSALI bmy_18040T0/1-290 RSFACRNPIQ VDLTKAVIIE AVSSFIFHSA LLHFQEVRTK LRIHLLSALI 201 250 ENSP00000318770/1-271 TFLVYA---- ---------- -----GGSLT GAVFNPALAL SLHFMCFDEA ENSBTAP00000026547/1-261 TFLVYA---- ---------- -----GGSLT GAVFNPTLAL SLHFKCFDEA BACU012508/1-251 TFLVYA---- ---------- -----GGSLT GAVFNPALAL SLHFKCFDEA ENSTTRP00000006655/1-271 TFLVYA---- ---------- -----GGSLT GAVFNPALAL SLHFKCFDEA bmy_18040T0/1-290 TFLVYAVARK CKIYGLVSFC LKCITGGSLT GAVFNPALAL SLHFKCFDEA 251 300 ENSP00000318770/1-271 FPQFFIVYWL APSLGILLMI LMFSFFLPWL HNNHTINKKE ENSBTAP00000026547/1-261 FLQFFIVYWL SPSLGILLMI VMFNF--PSM AV-------- BACU012508/1-251 FLQFFIVYWL APSLGKHIFI ---------- ---------- ENSTTRP00000006655/1-271 FLQFFIVYWL APSLGILLMI LMFSFFLPWL YNNHTINKKE bmy_18040T0/1-290 FLQFFIVYWL APSLGILLMI LMFSFFLPWL YNNHTINKKE