KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:23 2014 Check: 00 .. Name: BACU012509/1-252 Len: 285 Check: 6569 Weight: 1.00 Name: ENSP00000433919/1-237 Len: 285 Check: 3821 Weight: 1.00 Name: ENSTTRP00000006678/1-237 Len: 285 Check: 2767 Weight: 1.00 Name: bmy_18041T0/1-270 Len: 285 Check: 8297 Weight: 1.00 Name: ENSBTAP00000026551/1-237 Len: 285 Check: 4504 Weight: 1.00 // 1 50 BACU012509/1-252 ---------- ---------- ---------- ---MSFLKSF PPPGSAEGLR ENSP00000433919/1-237 ---------- ---------- ---------- ---MSFLKSF PPPGPAEGLL ENSTTRP00000006678/1-237 ---------- ---------- ---------- ---MSFLKSF PPPGSAEGLR bmy_18041T0/1-270 QRFCSSGVIV TASGSGRGER SLLLIRVSAL LVAMSFLKSF PPPGSAEGLR ENSBTAP00000026551/1-237 ---------- ---------- ---------- ---MSFLRSF PPPGSAEGLR 51 100 BACU012509/1-252 QQQPDTEAVL NGKSLGTGTL YIAESRLSWL DGSGLGFSLE YPTISLHAVS ENSP00000433919/1-237 RQQPDTEAVL NGKGLGTGTL YIAESRLSWL DGSGLGFSLE YPTISLHALS ENSTTRP00000006678/1-237 QQQPDTEAVL NGKSFGTGTL YIAESRLSWL DGSGLGFSLE YPTISLHAVS bmy_18041T0/1-270 QQQPDTEAVL NGKSLGTGTL YIAESRLSWL DGSGLGFSLE YPTISLHAVS ENSBTAP00000026551/1-237 QQQPDTEAVL NGKGLGTGTL YIAESRLSWL DGSGLGFSLE YPTISLHAVS 101 150 BACU012509/1-252 RDLNAYPREH LYVMVNAKFG EESKESVADE EEEDSDDDIE PIAEFRFVPS ENSP00000433919/1-237 RDRSDCLGEH LYVMVNAKFE EESKEPVADE EEEDSDDDVE PITEFRFVPS ENSTTRP00000006678/1-237 RDLNAYPREH LYVMVNAKFG EESKESVADE EEEDSDDDIE PIAEFRFVPS bmy_18041T0/1-270 RDLNAYPREH LYVMVNAKFG EESKESVADE EEEDSDDDIE PIAEFRFVPS ENSBTAP00000026551/1-237 RDLNAYPREH LYVMVNAKFG EESKESVADE EEEDSDDDIE PISEFRFVPS 151 200 BACU012509/1-252 DRSALEAMFT AMCECQALHP DPEDEDSDDY DGEEYDVEAH EQGQGDIPTF ENSP00000433919/1-237 DKSALEAMFT AMCECQALHP DPEDEDSDDY DGEEYDVEAH EQGQGDIPTF ENSTTRP00000006678/1-237 DRSALEAMFT AMCECQALHP DPEDEDSDDY DGEEYDVEAH EQGQGDIPTF bmy_18041T0/1-270 DRSALEAMFT AMCECQALHP DPEDEDSDDY DGEEYDVEAH EQGQGDIPTF ENSBTAP00000026551/1-237 DKSALEAMFT AMCECQALHP DPEDEDSDDY DGDEYDVEAH EQGQGDIPTF 201 250 BACU012509/1-252 YTYEEGLSHL TAEGQATLER LEGMLSQSVS SQYNMAGVRT EDSIRDYEDY ENSP00000433919/1-237 YTYEEGLSHL TAEGQATLER LEGMLSQSVS SQYNMAGVRT EDSIRDYEDG ENSTTRP00000006678/1-237 YTYEEGLSHL TAEGQATLER LEGMLSQSVS SQYNMAGVRT EDSVRDYEDG bmy_18041T0/1-270 YTYEEGLSHL TAEGQATLER LEGMLSQSVS SQYNMAGVRT EDSIRDYEDG ENSBTAP00000026551/1-237 YTYEEGLSHL TAEGQATLER LEGMLSQSVS SQYNMAGVRT EDSVRDYEDG 251 300 BACU012509/1-252 SENTNYSTNK IEKLIWYVTN GYTNGMLRYF PAENS ENSP00000433919/1-237 MEVDTTPT-- -------VAG QFEDADVDH- ----- ENSTTRP00000006678/1-237 MEVDATPT-- -------VAG QFEDADVDH- ----- bmy_18041T0/1-270 MEVDTTPT-- -------VAG QFEDADVDH- ----- ENSBTAP00000026551/1-237 MEVDTTPT-- -------VAG QFEDADVDH- -----