KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:25 2014 Check: 00 .. Name: ENSP00000361014/1-465 Len: 543 Check: 6066 Weight: 1.00 Name: ENSBTAP00000026556/1-420 Len: 543 Check: 8365 Weight: 1.00 Name: BACU000307/1-459 Len: 543 Check: 5282 Weight: 1.00 Name: bmy_07207T0/1-452 Len: 543 Check: 2247 Weight: 1.00 Name: ENSTTRP00000011298/1-426 Len: 543 Check: 5589 Weight: 1.00 // 1 50 ENSP00000361014/1-465 MVSSQKLEKP IEMGSSEPLP IADGDRRRKK KRRGRATDSL PGKFEDMYKL ENSBTAP00000026556/1-420 ---------- --MGSSEPIP IAESDKRKKK KRKARATDSL PGKFEDVYKL BACU000307/1-459 -----MQNRP -EMGSSEPIP IAESDKRKKK KRKARTTDSL PGKFEDTYKL bmy_07207T0/1-452 -----MQNRP -EMGSSEPVP IAESDKRKKK KRKARATDSL PGKFEDTYKL ENSTTRP00000011298/1-426 RVCFAKLGRP IEMGSSEPVP IAESDKRKKK KRKARATDSL PGKFEDTYKL 51 100 ENSP00000361014/1-465 TSELLGEGAY AKVQGAVSLQ NGKEYAVKII EKQAGHSRSR VFREVETLYQ ENSBTAP00000026556/1-420 TSELLGEGAN AKVQVAVSLQ NGNEYAVKII EKHAGHSRSR VFREVETLYQ BACU000307/1-459 TSELLGEGAY AKVQGAVSLQ NGKEYAVKII EKHAGHSRSR VFREVETLYQ bmy_07207T0/1-452 TSELLGEGXY AKVQGAVSLQ NGKEYAVKII EKHAGHSRSR VFREVETLYQ ENSTTRP00000011298/1-426 TSELLGEGAY AKVQGAVSLQ SGKEYAVKII EKHAGHSRSR VFREVETLYQ 101 150 ENSP00000361014/1-465 CQGNKNILEL IEFFEDDTRF YLVFEKLQGG SILAHIQKQK HFNEREASRV ENSBTAP00000026556/1-420 CQGNKHILEL IEFFEDDTRF YLVFEKLQGG SILAHIQKQK HFNEREASRV BACU000307/1-459 CQGNKNILEL IEFFEDDTRF YLVFEKLQGG SILTHIQKQK HFNEREASRV bmy_07207T0/1-452 CQGNKNILEL IEFFEDDTRF YLVFEKLQGG SILTHIQKQK HFNEREASRV ENSTTRP00000011298/1-426 CQGNKNILEL IEFFEDDTRF YLVFEKLQGG SILTHIQKQK QFNEREASRV 151 200 ENSP00000361014/1-465 VRDVAAALDF LHTKDKVSLC HLGWSAMAPS GLTAAPTSLG SSDPPTSASQ ENSBTAP00000026556/1-420 VRDVAAALDF LHTK------ ---------- ---------- ---------- BACU000307/1-459 VQDVAAALDF LHTK------ ---------- ---------- ---------- bmy_07207T0/1-452 VQDVAAALDF LHTK------ ---------- ---------- ---------- ENSTTRP00000011298/1-426 VQDVAAALDF LHTK------ ---------- ---------- ---------- 201 250 ENSP00000361014/1-465 VAGTTGIAHR DLKPENILCE SPEK------ ---------- ---------- ENSBTAP00000026556/1-420 -----GIAHR DLKPENILCE SPEK------ ---------- ---------- BACU000307/1-459 -----GIAHR DLKPENILCE SPEK------ ---------- ---------- bmy_07207T0/1-452 -----GIAHR DLKPENILCE SPEKSGNKER AWRRGHLRTN PQVISSSLKK ENSTTRP00000011298/1-426 -----GIAHR DLKPENILCE SPEK------ ---------- ---------- 251 300 ENSP00000361014/1-465 ------VSPV KICDFDLGSG MKLNNSCTPI TTPELTTPCG SAEYMAPEVV ENSBTAP00000026556/1-420 ------VSPV KICDFDLGSG VKLNNSCTPI TTPELTTPCG SAEYMAPEVV BACU000307/1-459 ------VSPV KICDFDLGSG VKLNNSCTPI TTPELTTPCG SAEYMAPEVV bmy_07207T0/1-452 RKHDCQVSPV KICDFDLGSG VKLNNSCTPI TTPELTTPCG SAEYMAPEVV ENSTTRP00000011298/1-426 ------VSPV KICDFDLGSG VKLNNSCTPI TTPELTTPCG SAEYMAPEVV 301 350 ENSP00000361014/1-465 EVFTDQATFY DKRCDLWSLG VVLYIMLSGY PPFVGHCGAD CGWDRGEVCR ENSBTAP00000026556/1-420 EVFTDEATFY DKRCDLWSLG VVLYIMLSGY PPFVGHCGAD CGWDRGEVCT BACU000307/1-459 EVFTDEATFY DKRCDLWSLG VVLYIMLSGY PPFVGHCGAD CGWDRGEVCT bmy_07207T0/1-452 EVFTDEATFY DKRCDLWSLG VVLYIMLSGY PPFVGHCGAD CGWDRGEVCT ENSTTRP00000011298/1-426 EVFTDKATFY DKRCDLWSLG VVLYIMLSGY PPFVGHCGAD CGWDRGEVCT 351 400 ENSP00000361014/1-465 VCQNKLFESI QEGKYEFPDK DWAHISSEAK DLISKLLVRD AKQRLSAAQV ENSBTAP00000026556/1-420 VCQNKLFESI QKGKYEFPDK DWAHISNEAK DLISKLLVRD AKQRLSAAQV BACU000307/1-459 VCQNKLFESI QEGKYEFPDK DWAHISNEAK DLISKLLVRD AKQRLSAAQV bmy_07207T0/1-452 VCQNKLFESI QEGKYEFPDK DWAHISNEAK DLISKLLVRD AKQRLSAAQV ENSTTRP00000011298/1-426 VCQNKLFESI QEGKYEFPDK DWAHISNEAK DLISKLLVRD VKQRLSAAQV 401 450 ENSP00000361014/1-465 LQHPWVQG-- ---------- --QAPE---- ---------- ---------- ENSBTAP00000026556/1-420 LQHPWVQG-- ---------- --QAPE---- ---------- ---------- BACU000307/1-459 LQHPWVQGVW LPLFSSSTWM ASPAPASLRS RLRLFAGGKP VLWIHMNPNW bmy_07207T0/1-452 LQHPWVQG-- ---------- --QAPE---- ---------- ---------- ENSTTRP00000011298/1-426 LQHPWVQG-- ---------- --QAPE---- ---------- ---------- 451 500 ENSP00000361014/1-465 KGLPTPQVLQ RNSSTMDLTL FAAEAIALNR QLSQHEENE- --LAEEPEAL ENSBTAP00000026556/1-420 RGLPTPQVLQ RNSSTMDLTL FAAEAIALNR QLSQHEENEQ NKLAEESEVL BACU000307/1-459 KSLFTARSIP RNSSTMDLTL FAAEAIALNR QLSQHEENE- --LAKESEVL bmy_07207T0/1-452 RGLPTPQVLQ RNSSTMDLTL FAAEAIALNR QLSQH-ENE- --LAKESEAL ENSTTRP00000011298/1-426 RGLPTPQVLQ RNSSTMDLTL -AAEAI-LNR QLSQHEENE- --LAKESEAL 501 550 ENSP00000361014/1-465 ADGLCSMKLS PPCKSRLARR RALAQAGRGE DRSP---PTA L-- ENSBTAP00000026556/1-420 AEGLCSVKLS PPSKSRLARR RALAQAGRSG DAPPSPTPTT PAP BACU000307/1-459 AEGLCSVKLS PPSKSRLARR RALAQAGRSG DTQLSPTPTA L-- bmy_07207T0/1-452 AEGLCSVKLS PPSKSRLARR RALAQAGRSG DTQPSPTPTA L-- ENSTTRP00000011298/1-426 AEGLCSVKLS PPSKSRLARR RALTQAGRSG DTQPSPTPTE LC-