KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:29 2014 Check: 00 .. Name: ENSP00000260803/1-544 Len: 546 Check: 5662 Weight: 1.00 Name: ENSBTAP00000026574/1-544 Len: 546 Check: 8852 Weight: 1.00 Name: ENSTTRP00000003774/1-544 Len: 546 Check: 6606 Weight: 1.00 Name: BACU003168/1-517 Len: 546 Check: 2986 Weight: 1.00 Name: bmy_10304T0/1-495 Len: 546 Check: 9837 Weight: 1.00 // 1 50 ENSP00000260803/1-544 MRVAVAGCCH GELDKIYETL ALAERRGPGP VDLLLCCGDF QAVRNEADLR ENSBTAP00000026574/1-544 MRVAVAGCCH GELDKIYETL ALAERRGPGR IDLLLCCGDF QAVRNEADLR ENSTTRP00000003774/1-544 MRVAVAGCCH GELDKIYETL ALAERRGPGP IDLLLCCGDF QAVRNEADLR BACU003168/1-517 MRVAVAGCCH GELDKIYETL ALAERRGPGP IDLLLCCGDF QAVRNEADLR bmy_10304T0/1-495 MRVAVAGCCH GELDKIYETL ALAERRGPGP IDLLLCCGDF QAVRNEADLR 51 100 ENSP00000260803/1-544 CMAVPPKYRH MQTFYRYYSG EKKAPVLTLF IGGNHEASNH LQELPYGGWV ENSBTAP00000026574/1-544 CMAVPPKYRH MQTFYRYYSG EKKAPVLTIF IGGNHEASNH LQELPYGGWV ENSTTRP00000003774/1-544 CMAVPPKYRH MQTFYRYYSG EKKAPVLTIF IGGNHEASNH LQELPYGGWV BACU003168/1-517 CMAVPPKYRH MQTFYRYYSG EKKAPVLTIF IGGNHEASNH LQELPYGGWV bmy_10304T0/1-495 CMAVPPKYRH MQTFYRYYSG EKKAPVLTIF IGGNHEASNH LQELPYGGWV 101 150 ENSP00000260803/1-544 APNIYYLGLA GVVKYRGVRI GGISGIFKSH DYRKGHFECP PYNSSTIRSI ENSBTAP00000026574/1-544 APNIYYLGLA GVVKYRGVRI GGISGIFKSH DYRKGHFECP PYNAATVRSI ENSTTRP00000003774/1-544 APNIYYLGLA GVVKYRGVRI GGISGIFKSH DYRKGHFECP PYNAATIRSI BACU003168/1-517 APNIYYLG-- ---------- ---------- -----HFECP PYNAATIRSI bmy_10304T0/1-495 APNIYYLGLA GVVKYRGVRI GGISG----- -----HFECP PYNAATIRSI 151 200 ENSP00000260803/1-544 YHVRNIEVYK LKQLKQPIDI FLSHDWPRSI YHYGNKKQLL KTKSFFRQEV ENSBTAP00000026574/1-544 YHVRNIEVYK LKQLKQPMDI FLSHDWPRSI YHYGNKKQLL KTKSFFRQEV ENSTTRP00000003774/1-544 YHVRNIEVYK LKQLKQPMDI FLSHDWPRSI YHYGNKKQLL KTKSFFRQEV BACU003168/1-517 YHVRNIEVYK LKQLKQPMDI FLSHDWPRSI YHYGNKKQLL KTKSFFRQEV bmy_10304T0/1-495 YHVRNIEVYK LKQLKQPMDI FLSHDWPRSI YHYGNKKQLL KTKSFFRQE- 201 250 ENSP00000260803/1-544 ENNTLGSPAA SELLEHLKPT YWFSAHLHVK FAALMQHQAK DKGQTARATK ENSBTAP00000026574/1-544 ENNTLGSPAA SELLEHLKPT YWFSAHLHVK FAALMQHQTM DKGQSTKATK ENSTTRP00000003774/1-544 ENNTLGSPAA SELLEHLKPT YWFSAHLHVK FAALMQHQAK DKGQSAKATR BACU003168/1-517 ENNTLGSPAA SELLEHLKPT YWFSAHLHVK FAALMQHQAK DKGQSAKATK bmy_10304T0/1-495 ---------- ---------- ---------- --------AK DKGQSAKATK 251 300 ENSP00000260803/1-544 FLALDKCLPH RDFLQILEIE HDPSAPDYLE YDIEWLTILR ATDDLINVTG ENSBTAP00000026574/1-544 FLALDKCLPH RDFLQVIEVE HDPSAPDYLE YDAEWLTVLR ATDDLINVTE ENSTTRP00000003774/1-544 FLALDKCLPH RDFLQVIEIE HDPSAPDYLE YDTEWLAILR ATNDLMNVTE BACU003168/1-517 FLALDKCLPH RDFLQVIEIE HDPSAPDYLE YDTEWLAILR ATNDLINVSE bmy_10304T0/1-495 FLALDKCLPH RDFLQVIEIE HDPSAPDYLE YDTEWLAILR ATNDLINVSE 301 350 ENSP00000260803/1-544 RLWNMPENNG LHARWDYSAT EEGMKEVLEK LNHDLKVPCN FSVTAACYDP ENSBTAP00000026574/1-544 RLWNMPENNG LHTRWDYSAT KEAINEVLEK LNHDLKVPNN FSITAACYDP ENSTTRP00000003774/1-544 HLWNMPENNG LHTRWDYSAT KEAMNEVLEK LNHDLKVPCN FSVTAACYDP BACU003168/1-517 RLWNMPENNG LHTRWDYSAT KEAMSEVLEK LNHDLKVPCN FSVTAACYDP bmy_10304T0/1-495 RLWNMPENNG LHTRWDYSAT KEAMNEVLEK LNHDLKVPCN FSVTAACYDP 351 400 ENSP00000260803/1-544 SKPQTQMQLI HRINPQTTEF CAQLGIIDIN VRLQKSKEEH HVCGEYEEQD ENSBTAP00000026574/1-544 SKPQTQMQLV HRISPQTTEF CAQLGITDIN VRLQKAKEDQ HLCGDYEGQD ENSTTRP00000003774/1-544 SKPQTQMQLV HRINPQTTEF CAQLGITDIN IRLQKAKEEQ HLCGDYEEQD BACU003168/1-517 SKPQTQMQLV HRISPQTTEF CAQLGITDIN IRLQKAKEEQ HVCGDSEEQD bmy_10304T0/1-495 SKPQTQMQLV HRISPQTTEF CAQLGITDIN IRLQKAKEEQ HVCGDSEEQD 401 450 ENSP00000260803/1-544 DVESNDSGED QSEYNTDTSA LSSINPDEIM LDEEED-EDS IVSAHSGMNT ENSBTAP00000026574/1-544 DTEGNDSGED PSEYNTDTSA LSSINPDEIM LDEEEEYDDS IVSAHSDTNT ENSTTRP00000003774/1-544 DVQSNDSGED PSEYNTDTSA LSSINPDEIM LDEEEEYDDS IVSAHSDMNT BACU003168/1-517 DVESNDSGED PSEYNTDTSA LSSINPDEIM LDEEEEYDDS IVSAHSDMNT bmy_10304T0/1-495 DVESNDSGED PSEYNTDTSA LSSINPDEIM LDEEEEYDDS IVSAHSDMNT 451 500 ENSP00000260803/1-544 PSVEPS-DQA SEFSASFSDV RILPGSMIVS SDDTVDSTID REGKPGGTVE ENSBTAP00000026574/1-544 PSVEPSCDQA SDFSASFSDI RILPSSMTVS SDDTSGSPVC KEGNSGDPVD ENSTTRP00000003774/1-544 PSVEPSSDQA SDFSASFSDI RILPGSMTVS SDDTSGSPVG KEGNRGDPVE BACU003168/1-517 PSVEPSSDQA SDFSASFSDI RILPSSMTVS SDDTSGSPVG KEGNRGDPVE bmy_10304T0/1-495 PSVEPSSDQA SDFSASFSDI RILPSSMTVS SDDTSGSPVG KEGNRGDPVE 501 550 ENSP00000260803/1-544 SGNGEDLTKV PLKRLSDEHE PEQRKKIKRR NQAIYAAVDD DDDDAA ENSBTAP00000026574/1-544 LGDGKDLTTV PLKRLSDEHE PEQRKKIKRR NQAIYAAVDD NDTA-- ENSTTRP00000003774/1-544 LGDGKDLTNV PLKRLSDEHE PEQRKKIKRR NQAIYAAVDN DDTA-- BACU003168/1-517 LGDGKDLTKV PLKRLSDEHE PEQRKKIKRR NQAIYAAVDN DDTA-- bmy_10304T0/1-495 LGDGKDLTKV PLKRLSDEHE PEQRKKIKRR NQAIYAAVDN DDTA--