KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:29:29 2014  Check: 00 ..

 Name: ENSP00000329558/1-225     Len:    225  Check:  8318  Weight:  1.00
 Name: BACU009519/1-213          Len:    225  Check:  4847  Weight:  1.00
 Name: bmy_11260T0/1-225         Len:    225  Check:  8532  Weight:  1.00
 Name: ENSBTAP00000026575/1-224  Len:    225  Check:  2490  Weight:  1.00

//


                          1                                                   50
ENSP00000329558/1-225     MAVRSLWAGR LRVQRLLAWS AAWESKGWPL PFSTATQRTA GEDCRSEDPP 
BACU009519/1-213          ---------- --MQSLLASS AASDGRGWLH PFSTVTQRTV GEDCNSEDPP 
bmy_11260T0/1-225         MAVRFLWAVR RRMQPLLASS GASDGRGWLH PFSTATQRTA GEDCNSEDPP 
ENSBTAP00000026575/1-224  MAARLLWAVR RRMQP-LAAH AASEGRGWLH PFSTATQRTA GEDCNSEDPP 


                          51                                                 100
ENSP00000329558/1-225     DELGPPLAER ALRVKAVKLE KEVQDLTVRY QRAIADCENI RRRTQRCVED 
BACU009519/1-213          DELGPSLAER ALKLKAVKLE KEVQDFTVRY QRAVTDGDNI RRRTQRCVED 
bmy_11260T0/1-225         DELGPSLAER ALKLKAVKLE KEVQDLTVRY QRAIADGENI RRRTQRCVED 
ENSBTAP00000026575/1-224  DELGPSLAER ALKLKAVKLE KEVQDLTVRY QRAVADSENI RRRTQRCVED 


                          101                                                150
ENSP00000329558/1-225     AKIFGIQSFC KDLVEVADIL EKTTECISEE SEPEDQKLTL EKVFRGLLLL 
BACU009519/1-213          AKIFGIQSFC KDLVEVADIL EKTTECISEE TEPGDQKLTL EKIFLDLSFL 
bmy_11260T0/1-225         AKIFGIQSFC KDLVEVADIL EKTTECISEE TEPGDQKLTL EKIFRGLSLL 
ENSBTAP00000026575/1-224  AKIFGIQSFC KDLVEVADIL EKTTECISEE TEPADQKLTL EKIFRGLSLL 


                          151                                                200
ENSP00000329558/1-225     EAKLKSVFAK HGLEKLTPIG DKYDPHEHEL ICHVPAGVGV QPGTVALVRQ 
BACU009519/1-213          ETKLKSVFAK HGLEKLTPIG DKYDPHEHEL ICHVPADVGV QPGTVASVRQ 
bmy_11260T0/1-225         ETKLKSVFAK HGLEKMTPIG DKYDPHEHEL ICHVPAGVGV QPGTVALVRQ 
ENSBTAP00000026575/1-224  EAKLKSVFAK HGLEKMTPIG DKYDPHEHEL ICHVPAGVGV QPGTVAFVRQ 


                          201                                                250
ENSP00000329558/1-225     DGYKLHGRTI RLARVEVAVE SQRRL 
BACU009519/1-213          DGYKLHGRAI RLAQVEVAVG SQRRL 
bmy_11260T0/1-225         DGYKLHGRTI RLAQVEVAVE SQRRL 
ENSBTAP00000026575/1-224  DGYKLHGRTI RLAQVEVAVE SQRRL