KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:30 2014 Check: 00 .. Name: BACU018832/1-624 Len: 675 Check: 6510 Weight: 1.00 Name: ENSP00000420333/1-659 Len: 675 Check: 2460 Weight: 1.00 Name: ENSBTAP00000026578/1-673 Len: 675 Check: 9060 Weight: 1.00 Name: ENSTTRP00000003801/1-658 Len: 675 Check: 783 Weight: 1.00 Name: bmy_10303T0/1-357 Len: 675 Check: 2211 Weight: 1.00 // 1 50 BACU018832/1-624 ---------- ---------- ---------- ---------- -DMKNAVIGN ENSP00000420333/1-659 ---------- ----MEVTAS SRHYVDRLFD PDPQKVLQGV IDMKNAVIGN ENSBTAP00000026578/1-673 MACLLETPIR MSVLSEVTAS SRHYVDRLFD PDPQKVLQGV IDMKNAVIGN ENSTTRP00000003801/1-658 ---------- -----EVTAS SRHYVDRLFD PDPQKVLQGV IDMKNAVIGN bmy_10303T0/1-357 ---------- ---------- ---------- ---------- --MKNAVIGN 51 100 BACU018832/1-624 NKQKANLIVL GAVPRLLYLL QQETSSTELK TECAVVLGSL AMGTENNVKS ENSP00000420333/1-659 NKQKANLIVL GAVPRLLYLL QQETSSTELK TECAVVLGSL AMGTENNVKS ENSBTAP00000026578/1-673 NKQKANLIVL GAVPRLLYLL QQETSSTELK TECAVVLGSL AMGTENNVKS ENSTTRP00000003801/1-658 NKQKANLIVL GAVPRLLYLL QQETSSTELK TECAVVLGSL AMGTENNVKS bmy_10303T0/1-357 NKQKANLIVL GAVPRLLYLL QQETSSTELK TECAVVLGSL AMGTENNVKS 101 150 BACU018832/1-624 LLDCHIIPAL LQGLLSLDLK FIEACLRCLR TIFTSPVTPE ELLYTDATVI ENSP00000420333/1-659 LLDCHIIPAL LQGLLSPDLK FIEACLRCLR TIFTSPVTPE ELLYTDATVI ENSBTAP00000026578/1-673 LLDCHIIPAL LQGLLSPDLK FIEACLRCLR TIFTSPVTPE ELLYTDATVI ENSTTRP00000003801/1-658 LLDCHIIPAL LQGLLSPDLK FIEACLRCLR TIFTSPVTPE ELLYTDATVI bmy_10303T0/1-357 LLDCHIIPAL LQGLLSPDLK FIEACLRCLR TIFTSPVTPE ELLYTDATVI 151 200 BACU018832/1-624 PHLMALLSRS RYTQEYICQI FSHCCKGPDH QTILFNHGAV QNIAHLLTSV ENSP00000420333/1-659 PHLMALLSRS RYTQEYICQI FSHCCKGPDH QTILFNHGAV QNIAHLLTSL ENSBTAP00000026578/1-673 PHLMALLSRS RYTQEYICQI FSHCCKGPDH QTILFNHGAV QNIAHLLTSV ENSTTRP00000003801/1-658 PHLMALLSRS RYTQEYICQI FSHCCKGPDH QTILFNHGAV QNIAHLLTSV bmy_10303T0/1-357 PHLMALLSRS RYTQEYICQI FSHCCKGPDH QTILFNHGAV QNIAHLLTSV 201 250 BACU018832/1-624 SYKVRMQALK CFSVLAFENP QVSMTLVNVL VDGELLPQIF VKMLQRDKPI ENSP00000420333/1-659 SYKVRMQALK CFSVLAFENP QVSMTLVNVL VDGELLPQIF VKMLQRDKPI ENSBTAP00000026578/1-673 SYKVRMQALK CFSVLAFENP QVSMTLVNVL VDGELLPQIF VKMLQRDKPI ENSTTRP00000003801/1-658 SYKVRMQALK CFSVLAFENP QVSMTLVNVL VDGELLPQIF VKMLQRDKPI bmy_10303T0/1-357 SYKVRMQALK CFSVLAFENP QVSMTLVNVL VDGELLPQIF VKMLQRDKPI 251 300 BACU018832/1-624 EMQLTSAKCL TYMCRAGAIR TDDNCIVLKT LPCLVRMCSK ERLLEERVEG ENSP00000420333/1-659 EMQLTSAKCL TYMCRAGAIR TDDNCIVLKT LPCLVRMCSK ERLLEERVEG ENSBTAP00000026578/1-673 EMQLTSAKCL TYMCRAGAIR TDDNCIVLKT LPCLVRMCSK ERLLEERVEG ENSTTRP00000003801/1-658 EMQLTSAKCL TYMCRAGAIR TDDNCIVLKT LPCLVRMCSK ERLLEERVEG bmy_10303T0/1-357 EMQLTSAKCL TYMCRAGAIR TDDNCIVLKT LPCLVRMCSK ERLLEERVEG 301 350 BACU018832/1-624 AETLAYLIEP DVELQRIASI TDHLIAMLAD YFKYPSSVSA ITDIKRLDHD ENSP00000420333/1-659 AETLAYLIEP DVELQRIASI TDHLIAMLAD YFKYPSSVSA ITDIKRLDHD ENSBTAP00000026578/1-673 AETLAYLIEP DVELQRIASI TDHLIAMLAD YFKYPSSVSA ITDIKRLDHD ENSTTRP00000003801/1-658 AETLAYLIEP DVELQRIASI TDHLIAMLAD YFKYPSSVSA ITDIKRLDHD bmy_10303T0/1-357 AETLAYLIEP DVELQRIASI TDHLIAMLAD YFKYPSSVSA ITDIKRLDHD 351 400 BACU018832/1-624 LKHAHELRQA AFKLYASLGA NDEDIRKKII ETENMMDRIV TGLSESSVKV ENSP00000420333/1-659 LKHAHELRQA AFKLYASLGA NDEDIRKKII ETENMMDRIV TGLSESSVKV ENSBTAP00000026578/1-673 LKHAHELRQA AFKLYASLGA NDEDIRKKII DTENMMDRIV TGLSESSVKV ENSTTRP00000003801/1-658 LKHAHELRQA AFKLYASLGA NDEDIRKKII ETENMMDRIV TGLSESSVKV bmy_10303T0/1-357 LKHAHELRQA AFKLYASLGA NDEDIRKKV- ---------- ---------- 401 450 BACU018832/1-624 RLAAVRCLHS LSRSVQQLRT SFQDHAVWKP LMKVLQNAPD EILVVASSML ENSP00000420333/1-659 RLAAVRCLHS LSRSVQQLRT SFQDHAVWKP LMKVLQNAPD EILVVASSML ENSBTAP00000026578/1-673 RLAAVRCLHS LSRSVQQLRT SFQDHAVWKP LMKVLQNAPD EILVVASSML ENSTTRP00000003801/1-658 RLAAVRCLHS LSRSVQQLRT SFQDHAVWKP LMKVLQNAPD EILVVASSML bmy_10303T0/1-357 ---------- ---------- ---------- ---------- ---------- 451 500 BACU018832/1-624 CNLLLEFSPS KEPILESGAV ELLCGLTQSE NPALRVNGIW ALMVCFTKRR ENSP00000420333/1-659 CNLLLEFSPS KEPILESGAV ELLCGLTQSE NPALRVNGIW ALMNMAFQAE ENSBTAP00000026578/1-673 CNLLLEFSPS KEPILESGAV ELLCGLTQSE NPALRVNGIW ALMNMAFQAE ENSTTRP00000003801/1-658 CNLLLEFSPS KEPILESGAV ELLCGLTQSE NPALRVNGIW ALMXXXXXXX bmy_10303T0/1-357 -----SLGEG RPPVLTAS-- ---------- ---------- ---------- 501 550 BACU018832/1-624 EQLPLASALG RPGLSSFTHS ASLSVPPVGF KKVKRSSLHV ASGRGSRRSR ENSP00000420333/1-659 QKIKADILRS LSTEQLFRLL SDSDLNVLMK TLGLLRNLLS TRPHIDKIMS ENSBTAP00000026578/1-673 QKIKADILRS LSTEQLFRLL SDSDLNVLMK TLGLLRNLLS TRPHIDKIMS ENSTTRP00000003801/1-658 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10303T0/1-357 ---------- ---------- ---------- ---------- ---------- 551 600 BACU018832/1-624 AWKQVVFGRG VWGLQSFPDR WPFVLFQTLC ILANIADGTT AKELIMTNDD ENSP00000420333/1-659 THGKQIMQAV TLILEG--EH NIEVKEQTLC ILANIADGTT AKDLIMTNDD ENSBTAP00000026578/1-673 THGKQIMQAV TLILEG--EH NIEVKEQTLC ILANIADGTT AKELIMTNDD ENSTTRP00000003801/1-658 XXXXXXXXXX XXXXXX--XX XXXXXXXTLC ILANIADGTT AKELIMTNDD bmy_10303T0/1-357 ---------- ---------- ---------- -----RQGVT ST-------- 601 650 BACU018832/1-624 ILQKIKYYMG HSHVKLQLAA MFCISNLIWN EEEGSQERQD KLRDMGIVDI ENSP00000420333/1-659 ILQKIKYYMG HSHVKLQLAA MFCISNLIWN EEEGSQERQD KLRDMGIVDI ENSBTAP00000026578/1-673 ILQKIKYYMG HSHVKLQLAA MFCISNLVWN EEEGSQERQD KLRDMGIVDI ENSTTRP00000003801/1-658 ILQKIKYYMG HSHVKLQLAA MFCISNLIWN EEEGSQERQD KLRDMGIVDI bmy_10303T0/1-357 ---------- ---------- ---------- ---------- ---------- 651 700 BACU018832/1-624 LHKLSQSPDS NLCDK----- ----- ENSP00000420333/1-659 LHKLSQSPDS NLCDKAKMAL QQYLA ENSBTAP00000026578/1-673 LHKLSQSPDS NLCDKAKTAL QQYLA ENSTTRP00000003801/1-658 LHKLSQSPDS NLCDKAKMAL QQYLA bmy_10303T0/1-357 ---------- ---------- -----