KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:31 2014 Check: 00 .. Name: ENSTTRP00000000782/1-186 Len: 275 Check: 2792 Weight: 1.00 Name: BACU000296/1-238 Len: 275 Check: 768 Weight: 1.00 Name: bmy_12716T0/1-133 Len: 275 Check: 7499 Weight: 1.00 Name: ENSP00000360939/1-228 Len: 275 Check: 9281 Weight: 1.00 Name: ENSBTAP00000026582/1-196 Len: 275 Check: 2075 Weight: 1.00 // 1 50 ENSTTRP00000000782/1-186 MLRRCGRRLL YVLGLSFPLL TGRPLFLCPH RLMRPQVVFV LGGPGAGKGT BACU000296/1-238 ---------- ---------- ---------- ----MKCCW- --DAVSSKAI bmy_12716T0/1-133 ---------- ---------- --------MY FDFFPMCFF- ---------- ENSP00000360939/1-228 MLSRCRSGLL HVLGLSFLLQ TRRPILLCSP RLMKPLVVFV LGGPGAGKGT ENSBTAP00000026582/1-196 ---------- ---------- ---------- --MKPQVVFV LGGPGAGKGT 51 100 ENSTTRP00000000782/1-186 QCARIVEXXG YTHLSAGELL RDERKNPDSQ YGELIEKYIK DGKIVPVEIT BACU000296/1-238 VCNSAKLKYG YTHLSAGELL RDERKNPDSQ YGELIEKYIK DGKIVPVEIT bmy_12716T0/1-133 -----FQKYG YTHLSAGELL RDERKNPDSQ YGELIEKYIK DGKIVPVEIT ENSP00000360939/1-228 QCARIVEKYG YTHLSAGELL RDERKNPDSQ YGELIEKYIK EGKIVPVEIT ENSBTAP00000026582/1-196 QCARIVEKYG YTHLSAGELL RDERKNPDSQ YGELIEKYIK DGKIVPVEIT 101 150 ENSTTRP00000000782/1-186 ISLLRR---- ---------- ---------- ---------- ---GKKMFVT BACU000296/1-238 ISLLRREMDQ TMAASAQKNK FLIDGFPRNQ DNLQGWNKTM DGKADVSFVL bmy_12716T0/1-133 ISLLRR---- ---------- ---------- ---------- ---------- ENSP00000360939/1-228 ISLLKREMDQ TMAANAQKNK FLIDGFPRNQ DNLQGWNKTM DGKADVSFVL ENSBTAP00000026582/1-196 ISLLRREMDQ TMAANAQKNK FLIDGFPRNQ DNLQGWNKTM DGKADVSFVL 151 200 ENSTTRP00000000782/1-186 F----NYICI ERCLERGKSS GRSDDNRESL EKXXXXXXXX XXXXXXXXEE BACU000296/1-238 FFDCNNEICI ERCLERGKTS GRSDDNRESL EKRIQTYLQS TKPIIDLYEE bmy_12716T0/1-133 -------ICI ERCLERGKSS GRSDDNRESL EKRIQTYLQS TKPIIDLYEE ENSP00000360939/1-228 FFDCNNEICI ERCLERGKSS GRSDDNRESL EKRIQTYLQS TKPIIDLYEE ENSBTAP00000026582/1-196 FFDCNNEICI ERCLERGKSS GRSDDNRESL EKRIQTYLQS TKPIIDLYEE 201 250 ENSTTRP00000000782/1-186 MGKVKKIDAS KS-DE----- ---------- ---------- ----VFDEVV BACU000296/1-238 MGKVKKIDAS KSVDENCESR KLANSQVPNL VEKVVWKSDA DMKRMFEYLV bmy_12716T0/1-133 MGKVKKIDAS KSVDE----- ---------- ---------- ----VFDEVV ENSP00000360939/1-228 MGKVKKIDAS KSVDE----- ---------- ---------- ----VFDEVV ENSBTAP00000026582/1-196 MGKVRKIDAS KSVDE----- ---------- ---------- ----VFDEVV 251 300 ENSTTRP00000000782/1-186 KIFDKEG--- ---------- ----- BACU000296/1-238 PDVTKSSYIL ATNQQLLIIP SPFPF bmy_12716T0/1-133 KIFDKEG--- ---------- ----- ENSP00000360939/1-228 QIFDKEG--- ---------- ----- ENSBTAP00000026582/1-196 KIFDKEG--- ---------- -----