KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:31 2014 Check: 00 .. Name: ENSTTRP00000004420/1-290 Len: 345 Check: 7915 Weight: 1.00 Name: ENSP00000334216/1-291 Len: 345 Check: 6871 Weight: 1.00 Name: bmy_20903T0/1-344 Len: 345 Check: 9741 Weight: 1.00 Name: ENSBTAP00000026587/1-290 Len: 345 Check: 7224 Weight: 1.00 Name: BACU017390/1-290 Len: 345 Check: 7658 Weight: 1.00 // 1 50 ENSTTRP00000004420/1-290 MAALQEKKSC SQRMEEF--- ---------- ---------- -----RHYCW ENSP00000334216/1-291 MAALQEKKTC GQRMEEF--- ---------- ---------- -----QRYCW bmy_20903T0/1-344 MAVDSSMDTK SYRAQHWLSE DTTLITEAQL RSDGNPCGPA SGRPGHRQAW ENSBTAP00000026587/1-290 MAALQEKKSC GQRMEEF--- ---------- ---------- -----RRYCW BACU017390/1-290 MAALQEKKSC SQRMEEF--- ---------- ---------- -----QHYCW 51 100 ENSTTRP00000004420/1-290 NPDTGQMLG- ---------- RTPSRW---- ---------- -XXXXXXXXX ENSP00000334216/1-291 NPDTGQMLG- ---------- RTLSRW---- ---------- -VWISLYYVA bmy_20903T0/1-344 LSSIRSDSGG SPRPRQGPSH RLIVTWGACC NQFRAGGTSA AVWISLYYVA ENSBTAP00000026587/1-290 NPDTGQMLG- ---------- RTLSRW---- ---------- -VWISLYYVA BACU017390/1-290 TPDTGQMLG- ---------- RTLSRW---- ---------- -VWISLYYVA 101 150 ENSTTRP00000004420/1-290 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXVTLRP DVYGEKGLDI ENSP00000334216/1-291 FYVVMTGLFA LCLYVLMQTV DPYTPDYQDQ LRSPGVTLRP DVYGEKGLEI bmy_20903T0/1-344 FYVVMTGIFA LCIYVLMCTI DPYTPDYQDQ LKSPGVTLRP DVYGEKGLDI ENSBTAP00000026587/1-290 FYVVMTGIFA LCIYVLMCTI DPYTPDYQDQ LKSPGVTLRP DTYGDKGLDI BACU017390/1-290 FYVVMTGIFA LCIYVLMCTI DPYTPDYQDQ LKSPGVTLRP DVYGEKGLDI 151 200 ENSTTRP00000004420/1-290 SYNVSDNRTW TGLTQALHHF LAGYSPAAQE ANINCTAERY FFQESFLAPN ENSP00000334216/1-291 VYNVSDNRTW ADLTQTLHAF LAGYSPAAQE DSINCTSEQY FFQESFRAPN bmy_20903T0/1-344 SYNVSDNRTW TELTQALHHF LAGYSPAAQE DNINCTSERY FFQESFLAPN ENSBTAP00000026587/1-290 SYNVSDNRTW TGLTQALRHF LAGYSPAAQE DNINCTSERY FFQERFLAPN BACU017390/1-290 SYNVSDNRTW TELTQALHHF LAGYSPAAQE DNINCTSERY FFQERFLAPN 201 250 ENSTTRP00000004420/1-290 HTKFSCKFTA DMLQNCSGRP DPTFGFEEGK PCFIIKMNRI VNFLPGNNTA ENSP00000334216/1-291 HTKFSCKFTA DMLQNCSGLA DPNFGFEEGK PCFIIKMNRI VKFLPSNGSA bmy_20903T0/1-344 HTKFSCKFTA DMLQNCSGRP DPTFGFEEGK PCFIIKMNRI VKFLPGNSTG ENSBTAP00000026587/1-290 HTKFSCKFTA DMLQNCSGQP DPTFGFAEGK PCFIIKMNRI VKFLPGNSTA BACU017390/1-290 HTKFSCKFTA DMLQNCSGRP DPTFGFEEGK PCFIIKMNRI VKFLPGNSTA 251 300 ENSTTRP00000004420/1-290 PRVDCAFLDQ HPD-APALQV EYFPPKGVYS LHYFPYYGKK AQPHYSNPLV ENSP00000334216/1-291 PRVDCAFLDQ PRELGQPLQV KYYPPNGTFS LHYFPYYGKK AQPHYSNPLV bmy_20903T0/1-344 PRVDCTFLDQ HRD-APALQV EYFPPRGVYS LHYFPYYGKK AQPHYSNPLV ENSBTAP00000026587/1-290 PRVDCAFLDQ HRD-APALQV EYFPPNGSYS LHYFPYYGKK AQPHYSNPLV BACU017390/1-290 PRVDCTFLDQ HRD-APALQV EYFPPRGVYS LHYFPYYGKK AQPHYSNPLV 301 350 ENSTTRP00000004420/1-290 AAKLLNAPVN REVVIVCKIL AEHVTFDNPH DPYEGKVEFK LKIQK ENSP00000334216/1-291 AAKLLNIPRN AEVAIVCKVM AEHVTFNNPH DPYEGKVEFK LKIEK bmy_20903T0/1-344 AAKLLNVPRN REVVIVCKIL AEHVTFDNPH DPYEGKVEFK LKIQK ENSBTAP00000026587/1-290 AAKLLNVPKN KEVVVVCKIL AEHVTFDNPH DPYEGKVEFK LTIQK BACU017390/1-290 AAKLLNVPRN REVVIVCKIL AEHVTFDNPH DPYEGKVEFK LKIQK