KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:29:32 2014 Check: 00 .. Name: ENSP00000248244/1-712 Len: 771 Check: 3956 Weight: 1.00 Name: ENSBTAP00000026593/1-759 Len: 771 Check: 927 Weight: 1.00 Name: bmy_06947T0/1-705 Len: 771 Check: 4566 Weight: 1.00 Name: BACU002597/1-705 Len: 771 Check: 5127 Weight: 1.00 // 1 50 ENSP00000248244/1-712 MACTGPSLPS AFDILGAAGQ DKLLYLKHKL KTPRPGCQGQ DLLHAMVLLK ENSBTAP00000026593/1-759 MACTGPSLSG AFDILGAAGQ DKLLYLKHKL KTLRPGCRGA YLLHAMVLLK bmy_06947T0/1-705 MASTGPSLSG AFDILGAAGQ DKLLYLKHKL KTLRPGCRGA DLLHAMVLLK BACU002597/1-705 MASTGPSLSG AFDILGAAGQ DKLLYLKHKL KTLRPGCRGA DLLHAMVLLK 51 100 ENSP00000248244/1-712 LGQETEARIS LEALKADAVA RLVARQWAGV DSTEDPEEPP DVSWAVARLY ENSBTAP00000026593/1-759 LGQETEARIS LEALKADAVA QLVARQWAGV DSTETPEEPP DLSWAVARVY bmy_06947T0/1-705 LGQETEARIS LEALKADAVA KLVARQWAGV DSTEAPEEPP DVSRAVARVY BACU002597/1-705 LGQETEARIS LEALKADAVA KLVARQWAGV DSTEAPEEPP DVSRAVARVY 101 150 ENSP00000248244/1-712 HLLAEEKLCP ASLRDVAYQE AVRTLSSRDD HRLGELQDEA RNRCGWDIAG ENSBTAP00000026593/1-759 HLLTEEKLCP ATMREEAYRA ALRAFRSRDD LQLGELQEEA RDRCGWDVLG bmy_06947T0/1-705 HLLAEERLCP APMREEAYRA AVRAFRSRDD PQLGELQEEA RDRCGWDVLR BACU002597/1-705 HLLAEERLCP APMREEAYRA AIRAFRSRDD PQLGELQEEA RDRCGWEVLR 151 200 ENSP00000248244/1-712 DPGSIRTLQS NLGCLPPSSA LPSGTRSLPR PIDGVSDWSQ GCSLRSTGSP ENSBTAP00000026593/1-759 DLGGVQTLRS DLGCLPPSSA SLSRTRSDPR PIEHLSGWST ACSLRSTGSP bmy_06947T0/1-705 DLEGIQTLHS DLGCLLPSSA SPSGTRSDPR PIEDLSDWSR GHSLRSTGSP BACU002597/1-705 DLEGIQTLHS DLGCLLPSSA SPSGTRSHPR PIEDLSEWSR GHSLRSTGSP 201 250 ENSP00000248244/1-712 ASLASNLEIS QSPTMPFLSL HRSPHGPSKL CDDPQASLVP EPVPGGCQEP ENSBTAP00000026593/1-759 ASLGSNLEIS QSPTMALLSV HHSHHGPSKL CDHPQASVVP EPAPMGCQEP bmy_06947T0/1-705 ASLASNLEIS QSPTMALLSS HHSPHGPSKL CDKPRPSPVP EPAPMGCQEP BACU002597/1-705 ASLASNLEIR QSPTMALLSS HHSPHGPSKL CDKPRPSPVP EPAPMGCQEP 251 300 ENSP00000248244/1-712 EEMSWPPSGE IASPPELPSS PPPGLPEVAP DATSTGLPDT PAAPETSTNY ENSBTAP00000026593/1-759 EEMSWPPSVE AADSPVRPSS PGPGLPEVTT DACPASPHDP PEVPEISAHY bmy_06947T0/1-705 EEMSWPPSVE AARPPARPNS PAPRLPEVAA DACPASLHDP LEAPKTSTHH BACU002597/1-705 EEMSWPPSVE AARPPARPNS PAPRLPEVAA DACPASLHDP PEAPKTSTHH 301 350 ENSP00000248244/1-712 PVECTEGSAG PQSLPLPILE PVKNPCSVKD QTPLQLSVED TTSPNTKPCP ENSBTAP00000026593/1-759 PVECTDVPAA PKSLP----S PSKNTCLVTD QTPVQLSEED TAYLSAQPRP bmy_06947T0/1-705 PVECTDVPAA PTSLP----S PSRNACPVAD QSPIQLSEED TTYPAAQPRP BACU002597/1-705 PGECTDVPAA PKSLP----S RSRNACPVAD QSPIQLSEED TTYPAAQPRP 351 400 ENSP00000248244/1-712 PTPTTPETSP PPP-----PP PPSSTPCSAH LTPSS----- ---------- ENSBTAP00000026593/1-759 PTPSVPQTSP SFPSASTSPF PSPSTPPEAH PTPSKAHPTP PKAHSTPPKA bmy_06947T0/1-705 PTPSAPKTSP --------PF SSPSTPPKAH PTVSK----- ---------- BACU002597/1-705 PTPSAPKTSS --------PF SSPSTPPKAH PTVSK----- ---------- 401 450 ENSP00000248244/1-712 ---------- ---------- --LFPSSLES SSEQKFYNFV ILHARADEHI ENSBTAP00000026593/1-759 HPTSPKAHPT SPKAHPTVWN PEPPPPELE- SSEQKFYNFV VLHASADEHI bmy_06947T0/1-705 ---------- ---------- PGPPPPELE- SPEQKFYNFV VLHAGADEHI BACU002597/1-705 ---------- ---------- PGPPPPELE- SPEQKFYNFV VLHAGADEHI 451 500 ENSP00000248244/1-712 ALRVREKLEA LGVPDGATFC EDFQVPGRGE LSCLQDAIDH SAFIILLLTS ENSBTAP00000026593/1-759 ALRVRERLEA LGVHDGATFC EDFQVPGRGE LHCLQDALDH SAFIILLLTS bmy_06947T0/1-705 ALRVRERLEA LGVRDGATFC EDFQVPGRGE LHCLQDALDH SAFIILLLTS BACU002597/1-705 ALRVRERLEA LGVRDGATFC EDFQVPGRGE LHCLQDALDH SAFTILLLTS 501 550 ENSP00000248244/1-712 NFDCRLSLHQ VNQAMMSNLT RQGSPDCVIP FLPLESSPAQ LSSDTASLLS ENSBTAP00000026593/1-759 NFDCRLSQHQ TNQSLMSSLT RHGWQDCVIP FLPLESSLAQ LSPSTSSLLT bmy_06947T0/1-705 NFDCRLSQHQ ANQSLMSSLT RHGWQDCVIP FLPLESSLTQ LSPSTTSLLT BACU002597/1-705 NFDCRLSQHQ ANQSLMSSLT RHGWQDCVIP FLPLESSLTQ LSPSTTSLLN 551 600 ENSP00000248244/1-712 GLVRLDEHSQ IFARKVANTF KPHRLQARKA MWRKEQDTRA LREQSQHLDG ENSBTAP00000026593/1-759 GLVLLDEHSK IFARKVTNTF KPQMLRARKA KWRKEQDARA LREQSQQLES bmy_06947T0/1-705 ALVWLDEHSP IFAKRVANTF KSQKLRARKA KWRKEQDIRA LQEQSKHLEG BACU002597/1-705 ALVWLDEHSP IFAKRVANTF KSQKLRARKA KWRKEQDIRA LQEQSKHLEG 601 650 ENSP00000248244/1-712 ERMQAAALNA AYSAYLQSYL SYQAQMEQLQ VAFGSHMSFG TGAPYGARMP ENSBTAP00000026593/1-759 ERQHAAAWGA AYSAYVHSYL AYQTQVEKLQ VALANYMPFG TQLP------ bmy_06947T0/1-705 ERQQAAAWSA AHSAYLHNYL SYRMQMETLQ VAFGSCMPFE TQLPSVPQVP BACU002597/1-705 EWQQAAAWSA AHSAYLHNYL SYQMQMEKLQ VAFGNYMPFE TQLPSVPQVP 651 700 ENSP00000248244/1-712 FGGQVPLGAP P-PFPTWPGC PQPPPLHAWQ AGTPPPPSPQ PA-AFPQSLP ENSBTAP00000026593/1-759 FGGQGSLGTP PSSFPTLPG- HQPPPLPPWL GGTPPPIFPQ PPQTFPQPPP bmy_06947T0/1-705 FGGPGTLGAP PPPFPTRPG- HQPPPLPPWL AGMPPPAFPQ PPGAFLQPQA BACU002597/1-705 FGGPGTLGAP PPPFPTQPG- HQPPPLPPWL AGMPPPAFPQ PPVAFPQPQA 701 750 ENSP00000248244/1-712 -FPQS----- ---------P AFPTASPAPP QSPGLQPLII HHAQMVQLGL ENSBTAP00000026593/1-759 TFPQPPPTFQ QPPPACPQPP DFSQAPPARP QSPGLQPLII HHAQMVQLGV bmy_06947T0/1-705 -FPQP----- ---------P DFPQTSPVHP Q--GLQPLII HHAQMVQLGL BACU002597/1-705 -FPQP----- ---------P DFPQTSPVHS Q--GLQPLII HHAQMVQLGL 751 800 ENSP00000248244/1-712 NNHMWNQRGS QAPEDKTQEA E ENSBTAP00000026593/1-759 NNHMWNQRGT QAPEDNTRET E bmy_06947T0/1-705 NNHMWNQRGT QAPEDKTPET E BACU002597/1-705 NNHMWNQRGM QAPEDKTPET E