KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:46 2014 Check: 00 .. Name: bmy_00024T0/1-741 Len: 956 Check: 2350 Weight: 1.00 Name: BACU015823/1-936 Len: 956 Check: 874 Weight: 1.00 Name: ENSP00000360532/1-802 Len: 956 Check: 790 Weight: 1.00 Name: ENSTTRP00000006562/1-801 Len: 956 Check: 9004 Weight: 1.00 Name: ENSBTAP00000026654/1-802 Len: 956 Check: 9325 Weight: 1.00 // 1 50 bmy_00024T0/1-741 ---------- ---------- ---------- ---------- ---------- BACU015823/1-936 MQKQREKGPA ADLDLKSSSS HSDHSSETSL PEARKDKYPQ EFSLLKLQTI ENSP00000360532/1-802 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006562/1-801 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026654/1-802 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_00024T0/1-741 ------MPRI ---------- -----MIKGG ---------- ---------- BACU015823/1-936 IDPRNGIPKV TPGDNPYMYP EQSKGFHKAG STLPPGSFSL MPYEKKFDTF ENSP00000360532/1-802 ------MPRI ---------- -----MIKGG ---------- ---------- ENSTTRP00000006562/1-801 ------MPRI ---------- -----MIKGG ---------- ---------- ENSBTAP00000026654/1-802 ------MPRI ---------- -----MIKGG ---------- ---------- 101 150 bmy_00024T0/1-741 ---------- ---VW----- ---------- ---------- -----RNTED BACU015823/1-936 IPLEPLPQIP NLPFWVKEKA NELKNEIREV EELDRAGSKE MFLNREGDQD ENSP00000360532/1-802 ---------- ---VW----- ---------- ---------- -----RNTED ENSTTRP00000006562/1-801 ---------- ---VW----- ---------- ---------- -----RNTED ENSBTAP00000026654/1-802 ---------- ---VW----- ---------- ---------- -----RNTED 151 200 bmy_00024T0/1-741 EILKAAVMKY GKNQWSRIAS LLHRKSAKQC KARWYEWLDP SIKKTEWSRE BACU015823/1-936 EILKAAVMKY GKNQWSRIAS LLHRKSAKQC KARWYEWLDP SIKKTEWSRE ENSP00000360532/1-802 EILKAAVMKY GKNQWSRIAS LLHRKSAKQC KARWYEWLDP SIKKTEWSRE ENSTTRP00000006562/1-801 EILKAAVMKY GKNQWSRIAS LLHRKSAKQC KARWYEWLDP SIKKTEWSRE ENSBTAP00000026654/1-802 EILKAAVMKY GKNQWSRIAS LLHRKSAKQC KARWYEWLDP SIKKTEWSRE 201 250 bmy_00024T0/1-741 EEEKLLHLAK LMPTQWRTIA PIIGRTAAQC LEHYEFLLDK AAQRDNEEET BACU015823/1-936 EEEKLLHLAK LMPTQWRTIA PIIGRTAAQC LEHYEFLLDK AAQRDNEEET ENSP00000360532/1-802 EEEKLLHLAK LMPTQWRTIA PIIGRTAAQC LEHYEFLLDK AAQRDNEEET ENSTTRP00000006562/1-801 EEEKLLHLAK LMPTQWRTIA PIIGRTAAQC LEHYEFLLDK AAQRDNEEET ENSBTAP00000026654/1-802 EEEKLLHLAK LMPTQWRTIA PIIGRTAAQC LEHYEFLLDK AAQRDNEEET 251 300 bmy_00024T0/1-741 TDDPRKLKPG EIDPNPETKP ARPDPIDMDE DELEMLSEAR ARLANTQGKK BACU015823/1-936 TDDPRKLKPG EIDPNPETKP ARPDPIDMDE DELEMLSEAR ARLANTQGKK ENSP00000360532/1-802 TDDPRKLKPG EIDPNPETKP ARPDPIDMDE DELEMLSEAR ARLANTQGKK ENSTTRP00000006562/1-801 TDDPRKLKPG EIDPNPETKP ARPDPIDMDE DELEMLSEAR ARLANTQGKK ENSBTAP00000026654/1-802 TDDPRKLKPG EIDPNPETKP ARPDPIDMDE DELEMLSEAR ARLANTQGKK 301 350 bmy_00024T0/1-741 AKRKAREKQL EEARRLAALQ KRRELRAAGI EIQKKRKKKR GVDYNAEIPF BACU015823/1-936 AKRKAREKQL EEARRLAALQ KRRELRAAGI EIQKKRKKKR GVDYNAEIPF ENSP00000360532/1-802 AKRKAREKQL EEARRLAALQ KRRELRAAGI EIQKKRKRKR GVDYNAEIPF ENSTTRP00000006562/1-801 AKRKAREKQL EEARRLAALQ KRRELRAAGI EIQKKRKKKR GVDYNAEIPF ENSBTAP00000026654/1-802 AKRKAREKQL EEARRLAALQ KRRELRAAGI EIQKKRKKKR GVDYNAEIPF 351 400 bmy_00024T0/1-741 EKKPALGFYD TSEENYQALD ADFRKLRQQD LDGELRSEKE GRDRKKDKQH BACU015823/1-936 EKKPALGFYD TSEENYQALD ADFRKLRQQD LDGELRSEKE GRDRKKDKQH ENSP00000360532/1-802 EKKPALGFYD TSEENYQALD ADFRKLRQQD LDGELRSEKE GRDRKKDKQH ENSTTRP00000006562/1-801 EKKPALGFYD TSEENYQALD ADFRKLRQQD LDGELRSEKE GRDRKKDKQH ENSBTAP00000026654/1-802 EKKPALGFYD TSEENYQTLD ADFRKLRQQD LDGELRSEKE GRDRKKDKQH 401 450 bmy_00024T0/1-741 LKRKKESDLP SAILQTSGVS EFTKKRSKLT IAVKINMGVV EKRKFIQLII BACU015823/1-936 LKRKKESDLP SAILQTSGVS EFTKKRSKLV L--------- ---------- ENSP00000360532/1-802 LKRKKESDLP SAILQTSGVS EFTKKRSKLV L--------- ---------- ENSTTRP00000006562/1-801 LKRKKESDLP SAILQTSGVS EFTKKRSKLV L--------- ---------- ENSBTAP00000026654/1-802 LKRKKESDLP SAILQTSGVS EFTKKRSKLV L--------- ---------- 451 500 bmy_00024T0/1-741 GSVPLNYNAE LQEVVKVGQA SEIARQTAEE SGITNSASST LLSEYNVTNN BACU015823/1-936 -PAPQISDAE LQEVVKVGQA SEIARQTAEE SGITNSASST LLSEYNVTNN ENSP00000360532/1-802 -PAPQISDAE LQEVVKVGQA SEIARQTAEE SGITNSASST LLSEYNVTNN ENSTTRP00000006562/1-801 -PAPQISDAE LQEVVKVGQA SEIARQTAEE SGITNSASST LLSEYNVTNN ENSBTAP00000026654/1-802 -PAPQISDAE LQEVVKVGQA SEIARQTAEE SGITNSASST LLSEYNVTNN 501 550 bmy_00024T0/1-741 SIALRTPRTP ASQDRILQEA QNLMALTNVD TPLKGGLNTP LHESDFSGVT BACU015823/1-936 SIALRTPRTP ASQDRILQEA QNLMALTNVD TPLKGGLNTP LHESDFSGVT ENSP00000360532/1-802 SVALRTPRTP ASQDRILQEA QNLMALTNVD TPLKGGLNTP LHESDFSGVT ENSTTRP00000006562/1-801 SIALRTPRTP ASQDRILQEA QNLMALTNVD TPLKGGLNTP LHESDFSGVT ENSBTAP00000026654/1-802 SIALRTPRTP ASQDRILQEA QNLMALTNVD TPLKGGLNTP LHESDFSGVT 551 600 bmy_00024T0/1-741 PQRQVVQTPN TVLSTPFRTP SHGSEGLTPR SGTTPKP--- ---------- BACU015823/1-936 PQRQVVQTPN TVLSTPFRTP SHGSEGLTPR SGTTPKPVIN STPGRTPLRD ENSP00000360532/1-802 PQRQVVQTPN TVLSTPFRTP SNGAEGLTPR SGTTPKPVIN STPGRTPLRD ENSTTRP00000006562/1-801 PQRQVVQTPN TVLSTPFRTP SHGSEGLTPR SGTTPKPVIN STPGRTPLRD ENSBTAP00000026654/1-802 PQRQVVQTPN TVLSTPFRTP SHGSEGLTPR SGTTPKPVIN STPGRTPLRD 601 650 bmy_00024T0/1-741 ---------- ---------- --ERESREHL RLGLLGLPAP KNDFEIVLPE BACU015823/1-936 KLNINPEDGM ADYSDPSYVK QMERESREHL RLGLLGLPAP KNDFEIVLPE ENSP00000360532/1-802 KLNINPEDGM ADYSDPSYVK QMERESREHL RLGLLGLPAP KNDFEIVLPE ENSTTRP00000006562/1-801 KLNINPEDGM ADYSDPSYVK QMERESREHL RLGLLGLPAP KNDFEIVLPE ENSBTAP00000026654/1-802 KLNINPEDGM ADYSDPSYVK QMERESREHL RLGLLGLPAP KNDFEIVLPE 651 700 bmy_00024T0/1-741 NAEKELEDRE IDDTYIEDAA DVDARKQAIR DAERVKEMKR MHKAVQKDLP BACU015823/1-936 NAEKELEDRE IDDTYIEDAA DVDARKQAIR DAERVKEMKR MHKAVQKDLP ENSP00000360532/1-802 NAEKELEERE IDDTYIEDAA DVDARKQAIR DAERVKEMKR MHKAVQKDLP ENSTTRP00000006562/1-801 NAEKELEDRE IDDTYIEDAA DVDARKQAIR DAERVKEMKR MHKAVQKDLP ENSBTAP00000026654/1-802 NAEKELEERE IDDTYIEDAA DVDARKQAIR DAERVKEMKR MHKAVQKDLP 701 750 bmy_00024T0/1-741 RPSEVNETIL RPLNVEPPLT DLQKSEELIK KEMITMLHYD LLHHPYEPSG BACU015823/1-936 RPSEVNETIL RPLNVEPPLT DLQKSEELIK KEMITMLHYD LLHHPYEPSG ENSP00000360532/1-802 RPSEVNETIL RPLNVEPPLT DLQKSEELIK KEMITMLHYD LLHHPYEPSG ENSTTRP00000006562/1-801 RPSEVNETIL RPLNVEPPLT DLQKSEELIK KEMITMLHYD LLHHPYEPSG ENSBTAP00000026654/1-802 RPSEVNETIL RPLNVEPPLT DLQKSEELIK KEMITMLHYD LLHHPYEPSG 751 800 bmy_00024T0/1-741 NKKGKTVGFG TNNAEHISYL EHNTYEKFSK EELKKAQDVL VQEMEVVKQG BACU015823/1-936 NKKGKTVGFG TNNAEHISYL EHNTYEKFSK EELKKAQDVL VQEMEVVKQG ENSP00000360532/1-802 NKKGKTVGFG TNNSEHITYL EHNPYEKFSK EELKKAQDVL VQEMEVVKQG ENSTTRP00000006562/1-801 NKK-KTIGFG TNNAEHIAYL EHNTYEKFSK EDLKKAQDVL VQEMEVVKQG ENSBTAP00000026654/1-802 NKKGKTVGFG TNNAEHIAYL EHNPYEKFSK EELKKAQDVL VQEMEVVKQG 801 850 bmy_00024T0/1-741 MSHGELSSEA YNQVWEECYS QVLYLPGQSR YTRANLASKK DRIESLEKRL BACU015823/1-936 MSHGELSSEA YNQVWEECYS QVLYLPGQSR YTRANLASKK DRIESLEKRL ENSP00000360532/1-802 MSHGELSSEA YNQVWEECYS QVLYLPGQSR YTRANLASKK DRIESLEKRL ENSTTRP00000006562/1-801 MSHGELSSEA YNQVWEECYS QVLYLPGQSR YTRANLASKK DRIESLEKRL ENSBTAP00000026654/1-802 MSHGELSSEA YNQVWEECYS QVLYLPGQSR YTRANLASKK DRIESLEKRL 851 900 bmy_00024T0/1-741 EVT--CVDTN A--------- ---------- RTLGAGPEIS --YDKTVLLF BACU015823/1-936 EINRGHMTTE AKRAAKMEKK MKILLGGYQS RAMGLMKQLN DLWDQIEQAY ENSP00000360532/1-802 EINRGHMTTE AKRAAKMEKK MKILLGGYQS RAMGLMKQLN DLWDQIEQAH ENSTTRP00000006562/1-801 EINRGHMTTE AKRAAKMEKK MKILLGGYQS RAMGLMKQLN DLWDQIEQAY ENSBTAP00000026654/1-802 EINRGHMTTE AKRAAKMEKK MKILLGGYQS RAMGLMKQLN DLWDQIEQAY 901 950 bmy_00024T0/1-741 L--------- ---------- --CLNVELNL FRAVYEFHFL TYANVF--GT BACU015823/1-936 LELRTFEELK KHEDSAIPRR LECLKEDVQR QQEREKELQH RYADLLLEKE ENSP00000360532/1-802 LELRTFEELK KHEDSAIPRR LECLKEDVQR QQEREKELQH RYADLLLEKE ENSTTRP00000006562/1-801 LELRTFEELK KHEDSAIPRR LECLKEDVQR QQEREKELQH RYADLLLEKE ENSBTAP00000026654/1-802 LELRTFEELK KHEDSAIPRR LECLKEDVQR QQEREKELQH RYADLLLEKE 951 1000 bmy_00024T0/1-741 CIRIHM BACU015823/1-936 TLKAKF ENSP00000360532/1-802 TLKSKF ENSTTRP00000006562/1-801 TLKAKF ENSBTAP00000026654/1-802 TLKAKF