KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:47 2014 Check: 00 .. Name: ENSP00000361004/1-380 Len: 382 Check: 755 Weight: 1.00 Name: ENSBTAP00000026668/1-380 Len: 382 Check: 1315 Weight: 1.00 Name: ENSTTRP00000002875/1-282 Len: 382 Check: 568 Weight: 1.00 Name: bmy_11317T0/1-335 Len: 382 Check: 4212 Weight: 1.00 Name: BACU009534/1-316 Len: 382 Check: 4111 Weight: 1.00 // 1 50 ENSP00000361004/1-380 MAFVCLAIGC LYTFLISTTF GCTSSSDTEI KVNPPQDFEI VDPGYLGYLY ENSBTAP00000026668/1-380 MAFIHLDIRC LYTLLICTAF GSTLSSNAEI KVNPPQDFQI VDPGYLGYLY ENSTTRP00000002875/1-282 MAFIHLDIRC LYTLLLCTAF GSTLSSNAEI KVNPPQDFEI VDPGYLGYLY bmy_11317T0/1-335 MAFIHLDIRC LYTLLICTAF GSTLSSNAEI KVNPPQDFEI VDPGYLGYLY BACU009534/1-316 MAFIHLDIRC LYILLICTAF GSTLSSNAGI KVNPPQDFEI VDPGYLGYLY 51 100 ENSP00000361004/1-380 LQWQPPLSLD HFKECTVEYE LKYRNIGSET WKTIITKNLH YKDGFDLNKG ENSBTAP00000026668/1-380 LQWQPPVSLD NFNKCTVEYE LKYRNVDSES WRTIITKNLL YKDGFDLNKG ENSTTRP00000002875/1-282 LQWQPPLSLD NFKECTVEYE LKYRNIGSAS WKTIITKNLH YKDGFDLNKG bmy_11317T0/1-335 LQWQPPLSLD NFKECTVEYE LKYRNIDSAS WKTIITKNLH YKDGFDLNKG BACU009534/1-316 LQWQPPLSLD NFKECTVEYE LKYRNIDSAS WKTIITKNLH YKDGFDLNKG 101 150 ENSP00000361004/1-380 IEAKIHTLLP WQCTNGSEVQ SSWAETTYWI SPQGIPETKV QDMDCVYYNW ENSBTAP00000026668/1-380 VEAKIHTLLP RQCTNGSEVQ SSWSEATYWI SSQGNLDTKI QDMDCVYYNW ENSTTRP00000002875/1-282 VEAKIHTLLL GQCTNGSEVQ SSWSEATYWI SPQGNLETKI HDMYCVYYNR bmy_11317T0/1-335 VEAKIHTLLL GQCTNGSEVQ SSWSEATYWI SPQGNLETKI QDMDCVYYNW BACU009534/1-316 VEAKIHTLLL GQCTNGSEVQ SSWSEATYWI SPQGNLETKI QDMDCVYYNW 151 200 ENSP00000361004/1-380 QYLLCSWKPG IGVLLDTNYN LFYWYEGLDH ALQCVDYIKA DGQNIGCRFP ENSBTAP00000026668/1-380 QYLLCSWKPG MGAHLDSNYR LYYWYEGLDH VLECIDYIQA KGKNIGCRFP ENSTTRP00000002875/1-282 QHLLCS-KPG MCVHSDTNY- LFXXYEGLDH VLQCADYIKA NGKNIGCIFP bmy_11317T0/1-335 QYLLCSWKPG MGVHFDASYN LFYWYEGLDH VLQCADYIKA NGKNIGCTFP BACU009534/1-316 EYLLCSWKPG MGVHFDANYN LFYWYEGLDH VLQCANYIKA NRKNIGCMFP 201 250 ENSP00000361004/1-380 YLEASDYKDF YICVNGSSEN KPIRSSYFTF QLQNIVKPLP PVYLTFTRES ENSBTAP00000026668/1-380 YLESSDYKDF YICVNGSSES QLIRPSYFIF QLQNIVKPLP PDYLSLTMKN ENSTTRP00000002875/1-282 YLESSDCKDF YICVNGSSES QVIRPSYFIF HLQNIVKPLP PDDLSLTVKN bmy_11317T0/1-335 YLESSDYKDF YICVNGSSES QFIRPSYFIF QLQNIVKPLP PDYLSLTVKN BACU009534/1-316 YLESSDYKDF YICVNGSSES QFIRPSYFIF QLQNIVKPLP PDYLSLTVKN 251 300 ENSP00000361004/1-380 SCEIKLKWSI PLGPIPARCF DYEIEIREDD TTLVTATVEN ETYTLKTTNE ENSBTAP00000026668/1-380 S-EVNLKWSI PRGPIPAKCL IYEIEFTEDD TAWVTTTIEN EIYITRTSNE ENSTTRP00000002875/1-282 SEEINLKWSI PKGPIPAKCF IYEIEFIEDD TAWV------ ---------- bmy_11317T0/1-335 SEEINLKWSI PKGPIPAKCF IYEIEFTEDD TTWVTTTVEN EIYITRTSNE BACU009534/1-316 SEEINLKWSI PKGPIPAKCF IYEIEFTEDD TTWVTTTVEN EIYITRTSNE 301 350 ENSP00000361004/1-380 TRQLCFVVRS KVNIYCSDDG IWSEWSDKQC WEGEDLSKKT LLRFWLPFGF ENSBTAP00000026668/1-380 SLQLCFLVRS KMNIYCADDG IWSEWSDEQC WKG-DIWKEI LLFFLVPFVL ENSTTRP00000002875/1-282 ---------- ---------- ---------- ---------- ---------- bmy_11317T0/1-335 SHQLCFLVRS KVNTYCSDDG IWSEWSEEQC WKGIR----- ---------- BACU009534/1-316 SQQLCFLVRS KVNIYC---- ---------- ---------- ---------- 351 400 ENSP00000361004/1-380 ILILVIFVTG LLLRKPNTYP KMIPEFFCDT -- ENSBTAP00000026668/1-380 VSLFVLIVTC TLLYKQRNLL KMVFHTEKRS PF ENSTTRP00000002875/1-282 ---------- ---------- ---------- -- bmy_11317T0/1-335 ---------- ---------- ---------- -- BACU009534/1-316 ---------- ---------- ---------- --