KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:48 2014 Check: 00 .. Name: ENSTTRP00000012324/1-261 Len: 262 Check: 1751 Weight: 1.00 Name: ENSP00000380037/1-262 Len: 262 Check: 3181 Weight: 1.00 Name: ENSBTAP00000026679/1-262 Len: 262 Check: 1436 Weight: 1.00 Name: bmy_08764T0/1-262 Len: 262 Check: 3150 Weight: 1.00 Name: BACU015477/1-241 Len: 262 Check: 8871 Weight: 1.00 // 1 50 ENSTTRP00000012324/1-261 MEHLERCAWA LRGTLVRAAV RRYLPWALVA SMLAGSLLKE LSPLPESYLS ENSP00000380037/1-262 MEHLERCEWL LRGTLVRAAV RRYLPWALVA SMLAGSLLKE LSPLPESYLS ENSBTAP00000026679/1-262 MEHLERCAWV LRGTLVRSAV RKYLPWALAA SMLAGSLLKE LSPLPESYLS bmy_08764T0/1-262 MEHLERCAWV LRGTLVRAAV RRYLPWALVA SMLVGSLLKE LSPLPESYLS BACU015477/1-241 MEHLERCAWV LRGTLVRAAV RRYLPWALVA SMLAGSLLKE LSPLPESYLS 51 100 ENSTTRP00000012324/1-261 NKRNVFNVYF VKMA-AWTFC LLLPFITLTN YQLMGKAGLV LRRLSTLLVG ENSP00000380037/1-262 NKRNVLNVYF VKVAWAWTFC LLLPFIALTN YHLTGKAGLV LRRLSTLLVG ENSBTAP00000026679/1-262 NKRNVLNVYF VKVAWAWTFC LLLPFIALTN YHLTGKAGLV LRRLSTLLVG bmy_08764T0/1-262 NKRNVLNVYF VKVAWAWTFC LLLPFITLTN YHLTGKAGLV LRRLSTLLVG BACU015477/1-241 NKRNVLNVYF VKVAWAWTFC LLLPFITLTN YHLTGKAGLV LRRLSTLLVG 101 150 ENSTTRP00000012324/1-261 TAXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380037/1-262 TAIWYICTSI FSNIEHYTGS CYQSPALEGV RKEHQSKQQC HQEGGFWHGF ENSBTAP00000026679/1-262 TAIWYVCTAI FSNIEHYTGS CYQSPALEGE RKEHQSKQQC HGEGGFWHGF bmy_08764T0/1-262 TAIWYVGTAV FANIEHYTGS CYQSPALEGV RKEHQSKRQC HGEGGFWHGF BACU015477/1-241 TAIWYVGTAV FTNIEHYTGS CYQSPALEGV RKEHQ----- ---------- 151 200 ENSTTRP00000012324/1-261 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380037/1-262 DISGHSFLLT FCALMIVEEM SVLHEVKTDR SHCLHTAITT LVVALGILTF ENSBTAP00000026679/1-262 DISGHSFLLT FCALMIVEEM AVLHEVKTDR NHCLHAAITT LVVALGFLTF bmy_08764T0/1-262 DISGHSFLLT FCALMIVEEM AVLHEVRTDR SHWLHAAITT LGVALGFLTF BACU015477/1-241 ------ILLT FCALMIVEEM AVLHEVRTDR SHWLHAAITT LGVALGFLTF 201 250 ENSTTRP00000012324/1-261 XXXXXXXXXX XXXXXXXXXV FGTLFGLLSW YGTYECWYLK SFSPGLPPQS ENSP00000380037/1-262 IWVLMFLCTA VYFHNLSQKV FGTLFGLLSW YGTYGFWYPK AFSPGLPPQS ENSBTAP00000026679/1-262 IWVWMFLCTA VYFHNLSQKV FGTLFGLLGW YGTYGCWYLK SFSPGLPPQS bmy_08764T0/1-262 IWVWMFLCTA VYFHNLSQKV FGTLFGLLGW YGTYGCWYLK SFSPGLPPQS BACU015477/1-241 IWVWMFLCTA VYFHNLSQKV FGTLFGLLGW YGTYGCWYLK SFSPGLPPQS 251 300 ENSTTRP00000012324/1-261 SSLNLKQDGY KK ENSP00000380037/1-262 CSLNLKQDSY KK ENSBTAP00000026679/1-262 SSLNLKQDTY KK bmy_08764T0/1-262 SSLNLKQDSY KK BACU015477/1-241 SSLNLKQDSY KK