KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:29:52 2014 Check: 00 .. Name: ENSP00000317310/1-370 Len: 426 Check: 7860 Weight: 1.00 Name: bmy_05755T0/1-186 Len: 426 Check: 2088 Weight: 1.00 Name: BACU010538/1-325 Len: 426 Check: 2552 Weight: 1.00 Name: ENSBTAP00000026714/1-226 Len: 426 Check: 6327 Weight: 1.00 // 1 50 ENSP00000317310/1-370 MGGGDGAAFK RPGDGARLQR VLGLGSRREP RSLPAGGPAP RRTAPPPPGH bmy_05755T0/1-186 ---------- -----MRQEE TSYTVVQTSE EGLAASGELP ---------- BACU010538/1-325 ---------- -----MRQEE TSYTVVQTSE EGLAASSELP ---------- ENSBTAP00000026714/1-226 MGNCVKSPLR NLSRKMRQEE TSYTVVQTSE EGLAASGELP ---------- 51 100 ENSP00000317310/1-370 ASAGPAAMSS HIAKSESKTS LLKAAAAAAS GGSRAPRHGP ARDPGLPSRR bmy_05755T0/1-186 ---GPLLM-- ---------- ---------- ---------- ---------- BACU010538/1-325 ---GPLLM-- ---------- ---------- ---------- ---------- ENSBTAP00000026714/1-226 ---GPLLM-- ---------- ---------- ---------- ---------- 101 150 ENSP00000317310/1-370 LPGSCPATPQ SSGDPSSRRP LCRPAPREEG ARGSQRVLPQ AHCRPREALP bmy_05755T0/1-186 LAQNCAVMHN LLG------P ACI------- ------FLRK GFAENRQPV- BACU010538/1-325 LAQNCAVMHN LLG------P ACI------- ------FLRK GFAENRQPVH ENSBTAP00000026714/1-226 LAQNCAVMHN LLG------P ACI------- ------FLRK GFAENRQP-- 151 200 ENSP00000317310/1-370 AAASRPSPSS PLPPARGRDG EERGLSPALG LRGSLRARGR GDSVPAAASE bmy_05755T0/1-186 ---------- ---------- ---------- ---------- ---------- BACU010538/1-325 AS-------- ----PQGFLD SPRRPGHCLR LQTCALDPGS RQRHWQPPGS ENSBTAP00000026714/1-226 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000317310/1-370 ADPFLHRLRP MLSSAFGQDR SLRPEEIEEL REAFREFDKD KDGYINCRDL bmy_05755T0/1-186 ---------- ---------- --------QL REAFREFDKD KDGYINCRDL BACU010538/1-325 YAVSCDRARY RMGVQLEKDR SLRPEEIEEL REAFREFDKD KDGYINCRDL ENSBTAP00000026714/1-226 ---------- --------DR SLRPEEIEEL REAFREFDKD KDGYINCRDL 251 300 ENSP00000317310/1-370 GNCMRTMGYM PTEMELIELS QQINMNLGGH VDFDDFVELM GPKLLAETAD bmy_05755T0/1-186 GNCMRTMGYM PTEMELIELS QQINMN---- ---------- ---------H BACU010538/1-325 GNCMRTMGYM PTEMELIELS QQINMNLGGH VDFDDFVELM GPKLLAETAD ENSBTAP00000026714/1-226 GNCMRTMGYM PTEMELIELS QQINMNLGGH VDFDDFVELM GPKLLAETAD 301 350 ENSP00000317310/1-370 MIGVKELRDA FREFDTNGDG EISTSELREA MRKLLGHQVG HRDIEEIIRD bmy_05755T0/1-186 MIGVKELRDA FREFDTNGDG EISTSELREA MRKLLGHQVG HRDIEEIIRD BACU010538/1-325 MIGVKELRDA FREFDTNGDG EISTSELREA MRKLLGHQVG HRDIEEIIRD ENSBTAP00000026714/1-226 MIGVKELRDA FREFDTNGDG EISTSELREA MRKLLGHQVG HRDIEEIIRD 351 400 ENSP00000317310/1-370 VDLNGDGRVD FEE------- ---------- ---------- ---------- bmy_05755T0/1-186 VDLNGDGRVD FEA------- ---LPKDPQI Y--------- ---------- BACU010538/1-325 VDLNGDGRVD FEGNFPVTHI LLGEAKNSQV HSPSHDIGDP ARFLLVQVAY ENSBTAP00000026714/1-226 VDLNGDGRVD FEE------- ---------- ---------- ---------- 401 450 ENSP00000317310/1-370 ---------- --------FV RMMSR- bmy_05755T0/1-186 ---------- --------TV SEIQ-- BACU010538/1-325 LGQDQETPWA GSLTLWVVLV PLLSNY ENSBTAP00000026714/1-226 ---------- --------FV RMMSR-