KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:52 2014 Check: 00 .. Name: ENSTTRP00000000145/1-228 Len: 295 Check: 6409 Weight: 1.00 Name: ENSP00000228506/1-292 Len: 295 Check: 1686 Weight: 1.00 Name: ENSBTAP00000026715/1-283 Len: 295 Check: 7723 Weight: 1.00 Name: BACU010537/1-291 Len: 295 Check: 2211 Weight: 1.00 Name: bmy_05756T0/1-291 Len: 295 Check: 2201 Weight: 1.00 // 1 50 ENSTTRP00000000145/1-228 ---------- ---------- ---------- ---------- ---------- ENSP00000228506/1-292 MLGAWAVEGT AVALLRLLLL LL--PPAIRG PGLGVAGVAG AAGAGLPESV ENSBTAP00000026715/1-283 MLGARAVEGA AVALLRLLLL LL-------- PALGVVRL-- -AGAGLPESV BACU010537/1-291 MLGALAVEGA AVALRRLLLL LLLLLPALRG PGLGVVGS-- -AGAGLPESV bmy_05756T0/1-291 MLGARAVEGA AVALLRLLLL LLLLLPALRG PGLGVVGS-- -AGAGLPESV 51 100 ENSTTRP00000000145/1-228 ---------- -------HFR KDPLEGRVGR ASDYGMKLPI LRSNPEDQIL ENSP00000228506/1-292 IWAVNAGGEA HVDVHGIHFR KDPLEGRVGR ASDYGMKLPI LRSNPEDQIL ENSBTAP00000026715/1-283 IWAVNAGGEA HVDVHGIHFR KDPLEGRVGR ASDYGMKLPI LRSNPEDQIL BACU010537/1-291 IWAVNAGGEA HVDVHGIHFR KDPLEGRVGR ASDYGMKLPI LRSNPEDQIL bmy_05756T0/1-291 IWAVNAGGEA HVDVHGIHFR KDPLEGRVGR ASDYGMKLPI LRSNPEDQIL 101 150 ENSTTRP00000000145/1-228 YQTERYNEET FGYEVPIKEE GDYVLVLKFA EVYFAQSQQK VFDVRLNGHV ENSP00000228506/1-292 YQTERYNEET FGYEVPIKEE GDYVLVLKFA EVYFAQSQQK VFDVRLNGHV ENSBTAP00000026715/1-283 YQTERYNEET FGYEVPIKEE GDYVLVLKFA EVYFAQSQQK VFDVRLNGHV BACU010537/1-291 YQTERYNEES FGYEVPIKEE GDYVLVLKFA EVYFAQSQQK VFDVRLNGHV bmy_05756T0/1-291 YQTERYNEET FGYEVPIKEE GDYVLVLKFA EVYFAQSQQK VFDVRLNGHV 151 200 ENSTTRP00000000145/1-228 VVKDLDIFDR VGXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000228506/1-292 VVKDLDIFDR VG-HSTAHDE IIPMSIRKGK LSVQGEVSTF TGKLYIEFVK ENSBTAP00000026715/1-283 VVKDLDIFDR VG-HSTAHDE IIPMSIRKGK LSVQGEVSTF TGKLYIEFVK BACU010537/1-291 VVKDLDIFDR VG-HSTAHDE IIPMSIRKGK LSVQGEVSTF TGKLYIEFVK bmy_05756T0/1-291 VVKDLDIFDR VG-HSTAHDE IIPMSIRKGK LSVQGEVSTF TGKLYIEFVK 201 250 ENSTTRP00000000145/1-228 GYYDNPKVCA LYIMAGTVDD VPKLQPHPGL EKKEEEEEEE EYDEGSNLKR ENSP00000228506/1-292 GYYDNPKVCA LYIMAGTVDD VPKLQPHPGL EKKEEEEEEE EYDEGSNLKK ENSBTAP00000026715/1-283 GYYDNPKVCA LYIMAGTVDD VPKLQPHPGL EKKEEEEEEE EYDEGSNLKR BACU010537/1-291 GYYDNPKVCA LYIMAGTVDD VPKLQPHPGL EKKEEEEEEE EYDEGSNLKR bmy_05756T0/1-291 GYYDNPKVCA LYIMAGTVDD VPKLQPHPGL EKKEEEEEEE EYDEGSNLKR 251 300 ENSTTRP00000000145/1-228 QTNKNRVQSG PRTPNPYASD NSSLMFPILV AFGVFIPTLF CLCRL ENSP00000228506/1-292 QTNKNRVQSG PRTPNPYASD NSSLMFPILV AFGVFIPTLF CLCRL ENSBTAP00000026715/1-283 QTNKNRVQSG PRTPNPYASD NSSLMFPILV AFGVFIPTLF CLCRL BACU010537/1-291 QTNKNRVQSG PRTPNPYASD NSSLMFPILV AFGVFIPTLF CLCRL bmy_05756T0/1-291 QTNKNRVQSG PRTPNPYASD NSSLMFPILV AFGVFIPTLF CLCRL