KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:53 2014 Check: 00 .. Name: ENSP00000389427/1-399 Len: 521 Check: 8468 Weight: 1.00 Name: ENSBTAP00000026720/1-385 Len: 521 Check: 4925 Weight: 1.00 Name: ENSTTRP00000012506/1-386 Len: 521 Check: 4674 Weight: 1.00 Name: bmy_07418T0/1-507 Len: 521 Check: 1524 Weight: 1.00 Name: BACU015239/1-355 Len: 521 Check: 969 Weight: 1.00 // 1 50 ENSP00000389427/1-399 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026720/1-385 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012506/1-386 ---------- ---------- ---------- ---------- ---------- bmy_07418T0/1-507 VPVSDFAVRA PLSLRTGQTS NLHLGIGLDV EKTLGRVSLP RALYERAVES BACU015239/1-355 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000389427/1-399 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026720/1-385 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012506/1-386 ---------- ---------- ---------- ---------- ---------- bmy_07418T0/1-507 AAGNPGAQGS RQLGRSCRGA WRASTRCSEY KRSAGEARPG IGVGPQGVLA BACU015239/1-355 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000389427/1-399 --MATGDLK- ---------- RSLRNLEQVL RLLN------ ---YPEEVDC ENSBTAP00000026720/1-385 --MATGDLK- ---------- RSLRNLEQVL RSLN------ ---YPREVDC ENSTTRP00000012506/1-386 --MATGDLK- ---------- RSLRNLEQVL RSLN------ ---YPREVDC bmy_07418T0/1-507 GGWAPGALGL HMLPPPLSVV RGRRPLEPVL CSAAAGDFIL EELHSQRIQY BACU015239/1-355 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000389427/1-399 VGLIKGDPAA SLPIISYSFT SYSPYVTELI MESNVELIAK NDLRFIDAVY ENSBTAP00000026720/1-385 VGLVKGDTAA SLPIISYSLT SYSPYVAELL VDSNIELLAK NDLRFIDTVY ENSTTRP00000012506/1-386 VGLVKGDTAA SLPIISYSLT SYSPYVAELL VDSNVELIAK NDLRFIDTVY bmy_07418T0/1-507 SSLVRGDTAA SLPIISYSLT SYSPYVAELL VDSNVELIAK NDLRFIDTVY BACU015239/1-355 --LVKGDTAA SLPIISYSLT SYSPYVAELL VDSNVELIAK NDLRFIDTVY 201 250 ENSP00000389427/1-399 KLLRDQFNYK PILTKKQFIQ CGFAEWKIQI VCDILNCVMK KHKELSSLQK ENSBTAP00000026720/1-385 KLLRDQFNYK PILTKKQFIQ CGFAEWKIQI ICDILNCVMK KHKELSSLEK ENSTTRP00000012506/1-386 KLLRDLFNYK PILTKKQFLQ CGFAEWKIQI ICDILNCVMK KHKELSGLEK bmy_07418T0/1-507 KLLRDQFNYK PILTKKQFLQ CGFAEWKIQI ICDILNCVMK KHKELSGPEK BACU015239/1-355 KLLRDQFNYK PILTKKQFLQ CGFAEWKIQI ICDILNCVMK KHKELSGLEK 251 300 ENSP00000389427/1-399 IPSQQRKKIS SGKSEPPLGN EKISAEAVGV DISGRFMTSG KKKAVVIRHL ENSBTAP00000026720/1-385 TPSQQRKKTS SAKSEPCSST EKTSTEPVGI DVTGRFVTSG KKKAVVIRHL ENSTTRP00000012506/1-386 APSQQRKKIS SAKSEPCSSA EKTSTEPVGI DVTGRFMTSG KKKAVVIRHL bmy_07418T0/1-507 TPSQQRKKIS SAKSEPXPGA EKTSAEPVGM DVTGRFMTSG KKKAVVIRHL BACU015239/1-355 TPSQRRKKII SAKSEPCSSA EKTSAEPVGI DVTGRFMTSG KKKAVVIRHL 301 350 ENSP00000389427/1-399 YNEDNVDISE DTLSPITDVN EAVDVSDLNA TEIKMPEVKV PEIKAEQQDV ENSBTAP00000026720/1-385 YNEDGANIPE DT---VTDVN EAFDVCDIKA AEITIPELQV PDINCEQEDI ENSTTRP00000012506/1-386 YNEDGPNIPE DT---VTDVN EAFDICDLKA AEIKIPELQV PEIKCEQQDT bmy_07418T0/1-507 YNEDGANIPE DT---VTDVN EAFDICDLKA AEIKIPELQV PEIKCEQQDT BACU015239/1-355 YNEDGANIPE DT---VTDVN EAFDICDLKA AEIRIPELQV PEIKCEQQDT 351 400 ENSP00000389427/1-399 NVNPEITALQ TMLAECQENL KKLTSIEKRL DCLEQKMKGK VMVDENTWTN ENSBTAP00000026720/1-385 TVNPEVTALQ SMLAECQEKL KKLTCIESRL ESLEEKMKGK VLVNEKTWAN ENSTTRP00000012506/1-386 EVNPEIIALQ TMLAECQEKL KKLTCIESRL ESLEEKMKGK VMVNEKTWAD bmy_07418T0/1-507 EVNPEIIALR TMLAECQEKL KKLTCIESRL ESLEEKMKGK VMVNEKTWAD BACU015239/1-355 EVNPEIIALQ TMLAECQEKL KKLTCIESRL ESLEEKMKGK VMVNEKTWAD 401 450 ENSP00000389427/1-399 LLSRVTLLET EMLLSKKNDE FIEFNEVSED YASCSDMDLL NPHRKSEVER ENSBTAP00000026720/1-385 LLSRVTLLET EMLLSKKNDE YIQFNEMSED YSSSSDMDSL NPDRKSKEER ENSTTRP00000012506/1-386 LLSRVTLLET EMLLSKKNDE YIEFNEMSED CASSSDMDNL NPDRKSKEER bmy_07418T0/1-507 LLSRVTLLET EMLLSKKNDE YIEFNEMSED CASSSDMDSL NPDRKSKEER BACU015239/1-355 LLSRVTLLET EMLLSKKNDD YIEFNEMSED CASSSDMDSL NPDRKSKEER 451 500 ENSP00000389427/1-399 PASIPLSSGY STASSDSTPR ASTVNYCGLN EISENFPAWS ATSSCSSLSW ENSBTAP00000026720/1-385 HANIPLSSGY STVSSDSTPR TSTVNYCGLK EISEE----T TMQKMERMKK ENSTTRP00000012506/1-386 QANIPLSSGY RMVSSDSTPR TSTINYCGLK EISEE----T TIQKMERVKK bmy_07418T0/1-507 QANIPLSSGY SMVSSDSTPR ASTVNYCGLR EISEE----T TIQKMERMKK BACU015239/1-355 QANIPLSSGY SMVSSDSTPR ASTVNYCGLR EISEE----T IIQKMERMKK 501 550 ENSP00000389427/1-399 LLRGHTSYLS SQSFAWPLSC V ENSBTAP00000026720/1-385 MFEETAELLK CPNH------ - ENSTTRP00000012506/1-386 MFEETAELLK CPNHL----- - bmy_07418T0/1-507 MFEDTAELLK CPNH------ - BACU015239/1-355 MFEETAELLK CPNH------ -