KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:09 2014 Check: 00 .. Name: ENSTTRP00000002269/1-1138 Len: 1167 Check: 6182 Weight: 1.00 Name: bmy_14009T0/1-910 Len: 1167 Check: 9611 Weight: 1.00 Name: BACU008285/1-1164 Len: 1167 Check: 8255 Weight: 1.00 Name: ENSP00000350332/1-1141 Len: 1167 Check: 1794 Weight: 1.00 Name: ENSBTAP00000026756/1-1135 Len: 1167 Check: 963 Weight: 1.00 // 1 50 ENSTTRP00000002269/1-1138 MPEEKPAAKN APAGKD-DTK PAPKEAPPPE ALAEPPKEAP PEDQSPTAEE bmy_14009T0/1-910 ---------- ---------- ---------- ---------- ---------- BACU008285/1-1164 MPEEKPAAKG APADKD-ATK PAPKEAPPQE ALAEPRKEAP PEDQSPTTEE ENSP00000350332/1-1141 MPEAKPAAKK APKGKD-APK GAPKEAPPKE APAEAPKEAP PEDQSPTAEE ENSBTAP00000026756/1-1135 MPEAKPAAKK APAGKDAAAK PAPKEATPQE APAAPPTEAP PEDQSPTAEE 51 100 ENSTTRP00000002269/1-1138 PTGIFLKKPA SVSVETGKDA VILAKLNGKE LPDKPAIKWF KGKWLELDSK bmy_14009T0/1-910 ---------- ---------- ---------- ---------- ---------- BACU008285/1-1164 PTGIFLKKPD SVSVEAGKDA VILAKLNGKE LPDKPTIKWF KGKWLELVSK ENSP00000350332/1-1141 PTGVFLKKPD SVSVETGKDA VVVAKVNGKE LPDKPTIKWF KGKWLELGSK ENSBTAP00000026756/1-1135 PTGVFLKKPD SVSVETGKDT VIVAKLNGKE LPAKPAVKWF KGKWLELGSK 101 150 ENSTTRP00000002269/1-1138 SGARFSFKES HDSASNVYSL ELHIRKVVLG DRGDYRLEVK AKDICDSCAF bmy_14009T0/1-910 ---------- ---------- ---------- ---------- ---------- BACU008285/1-1164 SGARFSFKES HDPASNVYAL ELHIGKVVLG DRGDYRLEVK AKDICDSCAF ENSP00000350332/1-1141 SGARFSFKES HNSASNVYTV ELHIGKVVLG DRGYYRLEVK AKDTCDSCGF ENSBTAP00000026756/1-1135 SGARFSFKES HDAASNVYTI ELHITKVVLG DRGDYRIEVK AKDFCDSCAF 151 200 ENSTTRP00000002269/1-1138 KIDVEAPNQD SAGQSLESFK RSGEKMPEGK GELDFSGLLQ KRQVVEEE-K bmy_14009T0/1-910 ---------- ---------- ---------- ---------- ---------- BACU008285/1-1164 KIDVEAPHQD AAGQTLESFK RSGERTPEGK GELDFSGLLK KRQVVEEE-K ENSP00000350332/1-1141 NIDVEAPRQD ASGQSLESFK RTSEKKSDTA GELDFSGLLK KREVVEEEKK ENSBTAP00000026756/1-1135 NIDVEAPRQD SAGQSLESFK RSGEAKSDTA GELDFSGLLK KRQVVEEE-K 201 250 ENSTTRP00000002269/1-1138 RKKKDDDDLG IPPEIWELLK GAKKSEYERI AFQYGITDLR GMLKRLKKAK bmy_14009T0/1-910 ---------- ---------- ---------- ---------- -MLKRLKKAK BACU008285/1-1164 KKKKDDDDLG IPPEIWELLK GAKKSEYERI AFQYGITDLR GMLKRLKKAK ENSP00000350332/1-1141 KKKKDDDDLG IPPEIWELLK GAKKSEYEKI AFQYGITDLR GMLKRLKKAK ENSBTAP00000026756/1-1135 KKKKDDDDLG IPPEIWELLK GAKKSEYERI AFQYGITDLR GMLKRLKKAK 251 300 ENSTTRP00000002269/1-1138 VEVKKSAAFT KKLDPAYQVD KGNKIKLVVE ISDPDLPLKW FKNGQEIKPS bmy_14009T0/1-910 VEVKKSTAFT KKLDPAYQVD RGNKIKLVVE ISNPDLPLKW FKNGQEIKPS BACU008285/1-1164 VEVKEGSAFT KKLDPAYQVD RGNKIKLVVE ISNPDLPLKW FKNGEEIKSS ENSP00000350332/1-1141 VEVKKSAAFT KKLDPAYQVD RGNKIKLMVE ISDPDLTLKW FKNGQEIKPS ENSBTAP00000026756/1-1135 VEVKKSAAFT KKLDPAYQVD RGNKIKLVVE ISDPDLPLKW FKNGQEIKPS 301 350 ENSTTRP00000002269/1-1138 SKHVFENVGK KRILTINKCA LADDAAYEVV VKDEKCFTEV FVR-EPPVLI bmy_14009T0/1-910 SKHVFENVGK KRILTINKCT LADDAAYEVV VKDEKCFTEV FVR-EPPVLI BACU008285/1-1164 SKHVFENVGK KRILTINKCT LADDAAYEVV VKDEKCFTEV FVR-EPPVLI ENSP00000350332/1-1141 SKYVFENVGK KRILTINKCT LADDAAYEVA VKDEKCFTEL FVK-EPPVLI ENSBTAP00000026756/1-1135 SKYVFENVGK KRILTINKCT LADDAAYEVV VKDEKCFTEL FVKVEPPVLI 351 400 ENSTTRP00000002269/1-1138 VTPLEDQQVF VGDRVEMAVE VSEEGAQVMW TKDGVELTRE DSFKSMYRFK bmy_14009T0/1-910 VTPLEDQQVF VGDRVEMAVE VSEEGAQVMW MKDGVELTRE DSFKDTYRLK BACU008285/1-1164 ITPLEDQQVF VGDRVEMVVE VSEEGAQVMW MKDGVELTRE DSFKAMYRLK ENSP00000350332/1-1141 VTPLEDQQVF VGDRVEMAVE VSEEGAQVMW MKDGVELTRE DSFKARYRFK ENSBTAP00000026756/1-1135 VTPLEDQQVF VGDRVEMAVE VSEEGAQVMW LKDGVELTRE DSFKARYRLK 401 450 ENSTTRP00000002269/1-1138 KDGKRHILIY SDVTLADSGH YQVMTNGGQC EAELIVEEKQ LEVLQDIADV bmy_14009T0/1-910 KDGKRHILIY SEVTLEDSGH FQVMTNGGQC EAELIVEEKQ LEVLQDIADV BACU008285/1-1164 KDGKRHILIY SDVTLEDSGH YQVMTNGGQC EAELIVEEKQ LEVLQDIADV ENSP00000350332/1-1141 KDGKRHILIF SDVVQEDRGR YQVITNGGQC EAELIVEEKQ LEVLQDIADL ENSBTAP00000026756/1-1135 KDGKRHILIY SEVTMEDKGH YQVMTNGGQC EAELIVEEKQ LEVLQDIADL 451 500 ENSTTRP00000002269/1-1138 TVKASEQAMF KCEVSDEKVT GKWYKNGVEV RPSKRITMSH IGXXXXXXID bmy_14009T0/1-910 TVKASEQAVF KCEVSDEKVT GKWYKNGVEV RPSKRITITH IGRFHRLVID BACU008285/1-1164 MVKASEQAVF KCEVSDEKVT GKWYKNGVEV RPSKRITITH VGRFHRLVID ENSP00000350332/1-1141 TVKASEQAVF KCEVSDEKVT GKWYKNGVEV RPSKRITISH VGRFHKLVID ENSBTAP00000026756/1-1135 TVKASEQAVF KCEVSDEKVT GKWYKNGVEV RPSKRITISH TGRFHKLVID 501 550 ENSTTRP00000002269/1-1138 DVRPEDE-DY TFVPDGYALS LSATLNFLEI TVEYVPKQEP PKIHLDFSGK bmy_14009T0/1-910 DVHPEDEGDY TFVPDGSALS LSAKLKFLEI TVEYVPKQEP PKIHLDFSGK BACU008285/1-1164 DVHPEDEGDY TFVPDGSALS LSAKLKFLEI TVEYVPKQEP PKIHLDFSGK ENSP00000350332/1-1141 DVRPEDEGDY TFVPDGYALS LSAKLNFLEI KVEYVPKQEP PKIHLDCSGK ENSBTAP00000026756/1-1135 DVRPEDEGDY TFVPDGYALS LSAKLKFLEI KVEYVPKQEP PKIHLDCSGQ 551 600 ENSTTRP00000002269/1-1138 TSENTVVVVA GNKLRLDVSI TGEPPPVATW MKEDEVFSST EGRVHIEKQK bmy_14009T0/1-910 TTENSVVVVA GNKLRLDVSI TGEPPPVATW MKEDEVFSGT EGRVRIEKRA BACU008285/1-1164 TSENSVVVVA GNKLRLDVSI TGEPPPVATW MKEDEVFSGT EGRVRIEKRA ENSP00000350332/1-1141 TSENAIVVVA GNKLRLDVSI TGEPPPVATW LKGDEVFTTT EGRTRIEKRV ENSBTAP00000026756/1-1135 TSENAIVVVA GNKLRMDVSI TGEPRPVATW MKEDEVFTGT EGRVRIEQRG 601 650 ENSTTRP00000002269/1-1138 DTSSFVIEST ERADEGRYTI KVTNPVGEDV ATIFLRVVDV PDPPEAVRVT bmy_14009T0/1-910 DTSSFVIEST ERADQGHYTI KVTNPVGEDV ASIFLQVVDV PDRPEAVRVT BACU008285/1-1164 DTNSFVIESA ERADQGHYTI KVTNPVGEDM ASIFLQVVDV PDPPEAVRVT ENSP00000350332/1-1141 DCSSFVIESA QREDEGRYTI KVTNPVGEDV ASIFLQVVDV PDPPEAVRIT ENSBTAP00000026756/1-1135 DISSFVIESA ERGDEGRYTI KVTNPVGEDV ASILLKVVDV PDPPEAVRVT 651 700 ENSTTRP00000002269/1-1138 SVGEDWATLV WEPPKYDGGQ MVTGYLLERK KKGSQHWMKL NFEVFTETTY bmy_14009T0/1-910 SVGEDWATLV WEPPKYDGGQ PVTGYLLERK KKGSQRWMKL NFEVFPETTY BACU008285/1-1164 SVGEDWATLV WEPPKYDGGQ PVTGYLLERK KKGSQRWMKV NFEVFPETTY ENSP00000350332/1-1141 SVGEDWAILV WEPPMYDGGK PVTGYLVERK KKGSQRWMKL NFEVFTETTY ENSBTAP00000026756/1-1135 SVGEDWAVLV WEPPKYDGGR PVTGYLLERK KKGSQRWMKL NFEVFTETTY 701 750 ENSTTRP00000002269/1-1138 ESTNMIEGIL YEMRVFAVNA IGVSQPSGKT SP-MPIAPTS EPQHLTVEDV bmy_14009T0/1-910 ESTNMIEGIL YEMRVFAVNA IGVSQPSVNT KPFMPIAATS EPQHLTVEDV BACU008285/1-1164 ESTNMIEGIL YEMRVFAVNA IGVSQPSVNT KPFLPIAPTS EPQHLTVEDV ENSP00000350332/1-1141 ESTKMIEGIL YEMRVFAVNA IGVSQPSMNT KPFMPIAPTS EPLHLIVEDV ENSBTAP00000026756/1-1135 ESTNMIEGIL YEMRVFAAPL IQ-QLKTLTP QPHAPFSPTS EPQHLTVEDV 751 800 ENSTTRP00000002269/1-1138 TDTTTTLKWR PPDRIGAGGI DGYLVEYCVE GSDEWIPANT ELVERCGFTV bmy_14009T0/1-910 TDTTTTLKWR PPDRIGAGGI DGYLVEYCVE GSDEWIPANT ELVERCGFTV BACU008285/1-1164 TDTTTTLKWR PPDRIGAGGI DGYLVEYCVE GSDQWIPANT ELVERCGFTV ENSP00000350332/1-1141 TDTTTTLKWR PPNRIGAGGI DGYLVEYCLE GSEEWVPANT EPVERCGFTV ENSBTAP00000026756/1-1135 TDTTTTLKWR PPDKIGAGGI DGYLIEYCVE GSDEWIPANT EPVERCGFTV 801 850 ENSTTRP00000002269/1-1138 KDLPTGARIT FRVVGVNIAG RSQPATLAQP VTIQEIVEQP KIRLPRHLRQ bmy_14009T0/1-910 KNLPTAARIT FRVVGVNIAG RSQPATLAQP VTIREIVEQP KIRLPRHLRQ BACU008285/1-1164 KNLPTGARIT FRVVGINIAG RSRPATLAQP VTIQEIVEQP KIRLPRHLRQ ENSP00000350332/1-1141 KNLPTGARIL FRVVGVNIAG RSEPATLAQP VTIREIAEPP KIRLPRHLRQ ENSBTAP00000026756/1-1135 KNLPTGAKIT FRVVGVNIAG RSQPATLAQP VTIREIVEQP KIRLPRHLRQ 851 900 ENSTTRP00000002269/1-1138 TYIRKVGEHI NLVIPFQGKP RPQVTWTKGG APIDTSHVLV HTSDLDTVFF bmy_14009T0/1-910 TYIRKVGEHI NLVIPFQGKP RPQVVWTKGG APIDTSRVHV RTSDLDTVFF BACU008285/1-1164 TYFRKVGEQI NLVIPFQGKP RPHVVWTKGG APIDTSRVHV HTSDLDTVFF ENSP00000350332/1-1141 TYIRKVGEQL NLVVPFQGKP RPQVVWTKGG APLDTSRVHV RTSDFDTVFF ENSBTAP00000026756/1-1135 TYVRKVGEHL NLVIPFQ--- ---VRRAKGG APIDTSHVHV RTSDFDTVFF 901 950 ENSTTRP00000002269/1-1138 VREAARSDSG EYELSVQIEN MKDTATIHIR VVEKAGPPEN VMVKEVWGTN bmy_14009T0/1-910 VRQAARSDSG EYELSVHIEN MTDTATIHIR VVEKAGPPEK VMVKEVWGSN BACU008285/1-1164 VRQAARSDSG EYELSVQIEN MKDTATIHIR VVEKAGPPEK VMVKEVWGSN ENSP00000350332/1-1141 VRQAARSDSG EYELSVQIEN MKDTATIRIR VVEKAGPPIN VMVKEVWGTN ENSBTAP00000026756/1-1135 VRQAARSDSG EYELTVQIEN MKDTATVCIR VVEKAGPPQN VMVKEVWGTN 951 1000 ENSTTRP00000002269/1-1138 ALVEWKPPKD DGNSEITGYF VQKADKKTME WFNVYEHNRQ TSCTVSDLIM bmy_14009T0/1-910 ALVEWKPPKD DGNSEITGYF IQKADKKTME WFNVYEHNRQ TSCTVSDLIM BACU008285/1-1164 ALVEWKPPKD DGNSEVTGYF IQKADKKTME WFNVYEHNRQ TSCTVSDLIM ENSP00000350332/1-1141 ALVEWQAPKD DGNSEIMGYF VQKADKKTME WFNVYERNRH TSCTVSDLIV ENSBTAP00000026756/1-1135 ALVEWQPPKD DGNSEITGYF VQKADKKTME WFTVYERNRH TSCTVSDLIM 1001 1050 ENSTTRP00000002269/1-1138 GNEYYFRVYS ENICGLSDSP GVSKNTACIL KTGVTFKLPE YKEHDFRTPP bmy_14009T0/1-910 GNEYYFRVYS KNICGLSDSP GVSKNTAWIP KTGATFKMPK YKEHDFRTPP BACU008285/1-1164 GNEYYFRVYS ENICGLSDSP GVSKNTARIL KTGATFKMPK YKEHDFRTPP ENSP00000350332/1-1141 GNEYYFRVYT ENICGLSDSP GVSKNTARIL KTGITFKPFE YKEHDFRMAP ENSBTAP00000026756/1-1135 GNEYYFRVYS ENVCGLSDLP GVSKNTARIV KTGMTLKLPE YKEHDFRTPP 1051 1100 ENSTTRP00000002269/1-1138 KFLTPLPDRV VVAGYAAALN CAVRGYPKPK VVWMKNKMEI SGDPRFLMNN bmy_14009T0/1-910 KFLTPLPDRV VVAGYATALN CAVRGYPKPK VVWMKNKMEI SGDPKFLMNN BACU008285/1-1164 KFLTPLPDRV VVAGYATALN CAVRGYPKPK VVWMKNNVEV SGDPKYLMNN ENSP00000350332/1-1141 KFLTPLIDRV VVAGYSAALN CAVRGHPKPK VVWMKNKMEI REDPKFLITN ENSBTAP00000026756/1-1135 KFLTPLPDRV VVAGYAAALN CAVRGHPKPK VVWMKNKMEI REDPKFLMTN 1101 1150 ENSTTRP00000002269/1-1138 YLGVLTLNIR RPSSFDSGTY SCLAVNELGE ALAECKLEVR SPR------- bmy_14009T0/1-910 YLGVLTLNIR RPSSFDSGTY TCRAVNELGE ALAECKLEVR SEHGAAPSAP BACU008285/1-1164 YLGVLTLNIR RPSSFDSGTY TCRAVNELGE ALAECKLEVR SEHGVGPSAA ENSP00000350332/1-1141 YQGVLTLNIR RPSPFDAGTY TCRAVNELGE ALAECKLEVR VPQ------- ENSBTAP00000026756/1-1135 QQGVLTLNIR RPSPFDSGTY SCRAVNELGE ALAECKLEVR APR------- 1151 1200 ENSTTRP00000002269/1-1138 ---------- ------- bmy_14009T0/1-910 PA-------- ------- BACU008285/1-1164 PARPSPTPFT KLTGGRG ENSP00000350332/1-1141 ---------- ------- ENSBTAP00000026756/1-1135 ---------- -------