KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:10 2014 Check: 00 .. Name: ENSP00000471272/1-231 Len: 293 Check: 6622 Weight: 1.00 Name: ENSBTAP00000026757/1-215 Len: 293 Check: 1868 Weight: 1.00 Name: bmy_14010T0/1-213 Len: 293 Check: 8075 Weight: 1.00 Name: ENSTTRP00000002270/1-243 Len: 293 Check: 5381 Weight: 1.00 Name: BACU008284/1-185 Len: 293 Check: 5193 Weight: 1.00 // 1 50 ENSP00000471272/1-231 MGPPLWPDLQ EPPPPGTSSQ IRSPLLCDVI KPAPHHDVTV RVVPPPRFLP ENSBTAP00000026757/1-215 ---------- ---------- ---------- ---------- ---------- bmy_14010T0/1-213 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002270/1-243 -RAPLHPGLR APPLMTPQSR ----RLLRDT PGPSRCDVTE PGAPPSRFLR BACU008284/1-185 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000471272/1-231 LLLRPLPSDG DIAMRRDRGP KPALGGAGEV EPGGMA---- --ASPTGRPR ENSBTAP00000026757/1-215 ---------- ---MKRGHEP KPAFGGAGEA GPGVMAERPL VPACPTGRPG bmy_14010T0/1-213 ---------- ---MKRGHKP NSAPGGAGEA GPGGMAERPQ VPACPTRQPG ENSTTRP00000002270/1-243 GRLPPLPPRG GVAMKRWHEP KPAPSGAGEA GPGGMA---- --ACPTHRPG BACU008284/1-185 ---------- ---------- ---------- ----MAERPL VPACPTRQPG 101 150 ENSP00000471272/1-231 RLQRYLQSGE FDQFRDFPIF ESNFV----- ---------- QVTRLGEVAN ENSBTAP00000026757/1-215 RLQRHLLSGE FDQLRDFPIF ESNFV----- ---------- QVTRLGEVAN bmy_14010T0/1-213 RLQRHLLSGE FDQLRDLPIF ESNFV----- ---------- QVTRLGEVAN ENSTTRP00000002270/1-243 RLQRHLLSGE FDQLRDLPIF ESNFVQSHPI YLASTSDPRP QVTRLGEVAN BACU008284/1-185 RLQRHLLSGE FDQLRDLPIF ESNFV----- ---------- QVTRLGEVAN 151 200 ENSP00000471272/1-231 EVTMGVAASS PALELPDLLL LAGPAKENGH LQLFGLFPLK FVQLFVHDKS ENSBTAP00000026757/1-215 KVTMGVAASS PALELPDLLL LAGPAKENGH LQLFGLFPLQ FVQLFVHDES bmy_14010T0/1-213 KVTMGVAASS PALELPDLLL LAGPAKENGR LQLFGLFPLQ FVQLFVHDES ENSTTRP00000002270/1-243 KVTMGVAASS PALELPDLLL LAGSAKENGR LQLFGLFPLQ FVQLFVHDES BACU008284/1-185 KVTMGVAASS PALELPDLLL LAGPAKENGR LQLFGLFPLQ FVQLFVHDES 201 250 ENSP00000471272/1-231 RCQLEVKLNT SRTFYLQLRA PLKTRDREFG QWVRLLYRLR FLSA-SAVPF ENSBTAP00000026757/1-215 RWQLKVKFRT GRAFYLQLRA PPESRDREFG QWVRLLYRLR FHSAQGAVPF bmy_14010T0/1-213 RWQLKVKFRT GRAFYLQLRA PPETRDREFG QWVRLLYRLR FHSSQGAVPF ENSTTRP00000002270/1-243 RWQLKVKFRT GRAFYLQLRA PPESRDRKFG QWVRLLYRLR FHSAQGAVPF BACU008284/1-185 RWQLKVKFHT GRAFYLQLRA PPETRDREFG QWVRLLYRLR FHSAQGAVPF 251 300 ENSP00000471272/1-231 TQE------- ---------- ---------- ---------- --- ENSBTAP00000026757/1-215 TQDYSALEDD EDDDEDEDRD LPAGELQAME ARLDPQMSEL WGL bmy_14010T0/1-213 TQEYSALEDD EEEDEDE--D LTEQEEVSGG ASSHGSQIGP TDL ENSTTRP00000002270/1-243 TQEC------ ---------- ---------- ---------- --- BACU008284/1-185 TQEYSALEDD EEEDEDE--D LTEQEKVSAG VATATR---- ---