KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:30:12 2014 Check: 00 .. Name: ENSBTAP00000026766/1-1542 Len: 1620 Check: 10 Weight: 1.00 Name: bmy_19403T0/1-1411 Len: 1620 Check: 3562 Weight: 1.00 Name: BACU013989/1-1619 Len: 1620 Check: 5204 Weight: 1.00 Name: ENSTTRP00000008373/1-1585 Len: 1620 Check: 8291 Weight: 1.00 // 1 50 ENSBTAP00000026766/1-1542 ---------- ---------- ---------- ---------- ---------- bmy_19403T0/1-1411 ---------- ---------- ---------- ---------- ---------- BACU013989/1-1619 MGAKESRIGF LSYEEALRRV TDVELKRLKD AFKRTCGLSY YMGQHCFIRE ENSTTRP00000008373/1-1585 ---------- ---------- TDVELKRLKD AFKRTCGLSY YMGQHCFIRE 51 100 ENSBTAP00000026766/1-1542 ---------- --VIYCSFGG TSKGLHFNNL IVGLVLLTRG RDEEKAKYIF bmy_19403T0/1-1411 ---------- ---------- ---------- --MTVRIT-- -----AKFL- BACU013989/1-1619 VLGDGVPPKV AEVIYCSFGG TSKGLHFNNL IVGLVLLTRG RDEEKAKYIF ENSTTRP00000008373/1-1585 VLGDGVPPKV AEVIYCSFGG TSKGLHFNNL IVGLVLLTRG RDEEKAKYIF 101 150 ENSBTAP00000026766/1-1542 SLFASESGSY VIREEMERML HVVDGKVPDT LRKCFSEGEK VNYEKFRNWL bmy_19403T0/1-1411 ---------- ---------- ---------- ---------- ---------- BACU013989/1-1619 SLFASESGSY VIREEMERML HVVDGKVPDT LRKCFSEGEK VNYEKFRNWL ENSTTRP00000008373/1-1585 SLFASESGSY VIREEMERML HVVDGKVPDT LRKCFSEGEK VNYEKFRNWL 151 200 ENSBTAP00000026766/1-1542 LLNKDAFTFS RWLLSGGVYV TLTDDSDTPT FYQTLAGVTH LEESDIIDLE bmy_19403T0/1-1411 ---TEILTWA RSL------- -----NDSP- ----FTNSET VEESDIIDLE BACU013989/1-1619 LLNKDAFTFS RWLLSGGVYV TLTDDSDTPT FYQTLAGVTH LEESDIIDLE ENSTTRP00000008373/1-1585 LLNKDAFTFS RWLLSGGVYV TLTDDSDTPT FYQTLAGVTH LEESDIIDLE 201 250 ENSBTAP00000026766/1-1542 KRYWLLKAQS RTGRFDLETF GPLVSPPIRP SLSEGLFNAF DENRDNHIDF bmy_19403T0/1-1411 KRYWLLKAQS RTGRFDLETF GPLVSPPIRP SLSEGLFNAF DENRDNHIDF BACU013989/1-1619 KRYWLLKAQS RTGRFDLETF GPLVSPPIRP SLSEGLFNAF DENRDNHIDF ENSTTRP00000008373/1-1585 KRYWLLKAQS RTGRFDLETF GPLVSPPIRP SLSEGLFNAF DENRDNHIDF 251 300 ENSBTAP00000026766/1-1542 KEISCGLSAC CRGPLAERQK YCFLLVQVNK LELFYKISKV ILVKVSSEFF bmy_19403T0/1-1411 KEISCGLSAC CRGPLAERQK FCFKVFDVDR DGVLSRVELR DMVVALLEVW BACU013989/1-1619 KEISCGLSAC CRGPLAERQK FCFKVFDVDR DGVLSRVELR DMVVALLEVW ENSTTRP00000008373/1-1585 KEISCGLSAC CRGPLAERQK FCFKVFDVDR DGVLSRVELR DMVVALLEVW 301 350 ENSBTAP00000026766/1-1542 NSIQNNHVIE IISKNSDEVA NHLN-HSATP LSVFNRNAYQ GLAVKGVGNN bmy_19403T0/1-1411 KDNRTDDIPE LHMDLSDIVE GILNAHDTTK MGHLSLEDYQ IWSVKNVLAN BACU013989/1-1619 KDNRTDDILE LHMDLSDIVE GILNAHDTTK MGHLTLEDYQ IWSVKNVLAN ENSTTRP00000008373/1-1585 KDNRTDDIPE LHMDLSDIVE GILNAHDTTK MGHLTLEDYQ IWSVKNVLAN 351 400 ENSBTAP00000026766/1-1542 FFYNDLEKV- CHIVLGLRPA TPEEEGQIIR GWLERESRYG LQPGHNWFII bmy_19403T0/1-1411 EFLNLLFQVR GHMFYT--PF VVLNFFFMYR GWLERESRYG LQPGHNWFII BACU013989/1-1619 EFLNLLFQV- CHIVLGLRPA TPEEEGQIIR GWLERESRYG LQPGHNWFII ENSTTRP00000008373/1-1585 EFLNLLFQV- CHIVLGLRPA TPEEEGQIIR GWLERESRYG LQPGHNWFII 401 450 ENSBTAP00000026766/1-1542 SMQWWQQWKE YVKYDASPVV IEPSSVLNGG KYSFGTTVHP IEQSEDRIGG bmy_19403T0/1-1411 SMQWWQQWKE YVKYDSSPVV IEPSSVLNGG KYLFGTTVHP IEQSEDRIGG BACU013989/1-1619 SMQWWQQWKE YVKYDTSPVV IEPSSVLNGG KYLFGTTVHP IEQSEDRIGG ENSTTRP00000008373/1-1585 SMQWWQQWKE YVKYDASPVA IEPSSVLNGG KYLFGTAVHP IEQSEDRIGG 451 500 ENSBTAP00000026766/1-1542 GSPSYVNTTE EKFSDNVSSA SEASETAGSG FLYSATPGTD MCFARQHNTS bmy_19403T0/1-1411 GSPSYVNTTE EKFSDNISTA SEASETAGSG FLYSATPGAD MCFARQHNTS BACU013989/1-1619 GSPSYVNTTE EKFSDNISTA SEASETAGSG FLYSATPGAD MCFARQHNTS ENSTTRP00000008373/1-1585 GSPSYVNTTE EKFSDNISTA SEASETAGSG FLYSATPGAD MCFARQHNTS 501 550 ENSBTAP00000026766/1-1542 DNNNQCLLGA NGNILLHLNP QKPGAIDNQP LVTQEPVKAT SLTLEGGRLK bmy_19403T0/1-1411 DNNNQCLLGT SGNILLHLNP QKPGAIDNQP LVTQEPVK-- ---------- BACU013989/1-1619 DNNNQCLLGT SGNILLHLNP QKPGAIDNQP LVTQEPVKAT SLTLEGGRLK ENSTTRP00000008373/1-1585 DNNNQCLLGT SGNILLHLNP QKPGAIDNQP LVTQEPVKAT SLTLEGGRLK 551 600 ENSBTAP00000026766/1-1542 RTPQLIHGRD YEMVPEPVWR ALYHWYGANL ALPRPVIKNS KTEIPELELF bmy_19403T0/1-1411 ---------- ---------- ---------- -----VIKNS KTEIPELELF BACU013989/1-1619 RTPQLIHGRD YEMVPEPVWR ALYHWYGANL ALPRPVIKNS KTEIPELELF ENSTTRP00000008373/1-1585 RTPQLIHGRD YEMVPEPVWR ALYHWYGANL ALPRPVIKNS KTEIPELELF 601 650 ENSBTAP00000026766/1-1542 PRYLLFLRQQ PATRTQQSNI WVNM------ --------GN VPSPNAPLKR bmy_19403T0/1-1411 PRYLLFLRQQ PATRTQQSNI WVNMGMMSLR MFPQHLPRGN VPSPNAPLKR BACU013989/1-1619 PRYLLFLRQQ PATRTQQSNI WVNMGMMSLR MFPQHLPRGN VPSPNAPLKR ENSTTRP00000008373/1-1585 PRYLLFLRQQ PATRTQQSNI WVNM------ --------GN VPSPNAPLKR 651 700 ENSBTAP00000026766/1-1542 VLAYTGCFSR MQTIKEIHEY LSQRLRIKEE DMRLWLYNSE NYLTLLDDED bmy_19403T0/1-1411 VLAYTGCFSR MQTIKEIHEY LSQRLRIKEE DMRLWLYNSE NYLTLLDDED BACU013989/1-1619 VLAYTGCFSR MQTIKEIHEY LSQRLRIKEE DMRLWLYNSE NYLTLLDDED ENSTTRP00000008373/1-1585 VLAYTGCFSR MQTIKEIHEY LSQRLRIKEE DMRLWLYNSE NYLTLLDDED 701 750 ENSBTAP00000026766/1-1542 HRLEYLKIQD EQHLVIEVRN KDMSWPEEMS FIANSSKIDR HKVPTEKGAT bmy_19403T0/1-1411 HRLEYLKIQD EQHLVIEVRN KDMSWPEEMS FIANSSKIDR HKVPTEKGAT BACU013989/1-1619 HRLEYLKIQD EQHLVIEVRN KDMSWPEEMS FIANSSKIDR HKVPTEKGAT ENSTTRP00000008373/1-1585 HRLEYLKIQD EQHLVIEVRN KDMSWPEEMS FIANSSKIDR HKVPTEKGAT 751 800 ENSBTAP00000026766/1-1542 GLSNLGNTCF MNSSIQCVSN TQPLTQYFIS GRHLYELNRT NPIGMKGHMA bmy_19403T0/1-1411 GLSNLGNTCF MNSSIQCVSN TQPLTQYFIS GRHLYELNRT NPIGMKGHMA BACU013989/1-1619 GLSNLGNTCF MNSSIQCVSN TQPLTQYFIS GRHLYELNRT NPIGMKGHMA ENSTTRP00000008373/1-1585 GLSNLGNTCF MNSSIQCVSN TQPLTQYFIS GRHLYELNRT NPIGMKGHMA 801 850 ENSBTAP00000026766/1-1542 KCYGDLVQEL WSGTQKNVAP LKLRWTIAKY APRFNGFQQQ DSQELLAFLL bmy_19403T0/1-1411 KCYGDLVQEL WSGTQKNVAP LKLRWTIAKY APRFNGFQQQ DSQELLAFLL BACU013989/1-1619 KCYGDLVQEL WSGTQKNVAP LKLRWTIAKY APRFNGFQQQ DSQELLAFLL ENSTTRP00000008373/1-1585 KCYGDLVQEL WSGTQKNVAP LKLRWTIAKY APRFNGFQQQ DSQELLAFLL 851 900 ENSBTAP00000026766/1-1542 DGLHEDLNRV HEKPYVELKD SDGRPDWEVA AEAWDNHLRR NRSIVVDLFH bmy_19403T0/1-1411 DGLHEDLNRV HEKPYVELKD SDGRPDWEVA AEAWDNHLRR NRSIVVDLFH BACU013989/1-1619 DGLHEDLNRV HEKPYVELKD SDGRPDWEVA AEAWDNHLRR NRSIVVDLFH ENSTTRP00000008373/1-1585 DGLHEDLNRV HEKPYVELKD SDGRPDWEVA AEAWDNHLRR NRSIVVDLFH 901 950 ENSBTAP00000026766/1-1542 GQLRSQVKCK TCGHISVRFD PFNFLSLPLP MDSYMHLEIT VIKLDGTTPV bmy_19403T0/1-1411 GQLRSQVKCK TCGHISVRFD PFNFLSLPLP MDSYMHLEIT VITLDGTTPV BACU013989/1-1619 GQLRSQVKCK TCGHISVRFD PFNFLSLPLP MDSYMHLEIT VITLDGTTPI ENSTTRP00000008373/1-1585 GQLRSQVKCK TCGHISVRFD PFNFLSLPLP MDSYMHLEIT VITLDGTTPV 951 1000 ENSBTAP00000026766/1-1542 RYGLRLNMDE KYTGLKKQLS DLCGLKSEQI LLAEVHGSNI KNFPQDNQKV bmy_19403T0/1-1411 RYGLRLNMDE KYTGLKKQLS DLCGLKSEQI LLAEVHGSNI KNFPQDNQKV BACU013989/1-1619 RYGLRLNMDE KYTGLKKQLS DLCGLKSEQI LLAEVHGSNI KNFPQDNQKV ENSTTRP00000008373/1-1585 RYGLRLNMDE KYTGLKKQLS DLCGLKSEQI LLAEVHGSNI KNFPQDNQKV 1001 1050 ENSBTAP00000026766/1-1542 RLSVSGFLCA FEIPIPGSPI SASSPIQTDF SSSPSTNGMF TLTANGDLPR bmy_19403T0/1-1411 RLSVSGFLCA FEIPIPGSPI SAPSPVQTDF SSSPSTNGMF TLTTNGDLPR BACU013989/1-1619 RLSVSGFLCA FEIPVPGSPI SAPSPVQTDF SSSPSTNGMF TLTTNGDLPR ENSTTRP00000008373/1-1585 RLSVSGFLCA FEIPVPGSPI SASSPVQTDF SSSPSTNGMF TLTTNGDLPR 1051 1100 ENSBTAP00000026766/1-1542 PIFIPNGMPN TVVPCGTEKN FTNGMVNGHM PSLPDSSFTG YIIAVHRKMM bmy_19403T0/1-1411 SIFIPNGMPN TVVPCGTEKN FTNGMVNGHM PSLPDSSFTG YIIAVHRKMM BACU013989/1-1619 SIFIPNGMPN TVVPCGTEKS FTNGTVNGHM PSLPDSSFTG YIIAVHRKMM ENSTTRP00000008373/1-1585 SIFIPNGMPN TVVPCGTEKN FTNGMVNGHM PSLPDSSFTG YIIAVHRKMM 1101 1150 ENSBTAP00000026766/1-1542 RTELYFLSSQ KNRPSLFGMP LIVPCTVHTR KKDLYDAVWI QVSRLASPLP bmy_19403T0/1-1411 RTELYFLSSQ KNRPSLFGMP LIVPCTVHTR KKDLYDAVWI QVSRLASPLP BACU013989/1-1619 RTELYFLSSQ KNRPSLFGMP LIVPCTVHTR KKDLYDAVWI QVSRLASPLP ENSTTRP00000008373/1-1585 RTELYFLSSQ KNRPSLFGMP LIVPCTAHTR KKDLYDAVWI QVSRLASPLP 1151 1200 ENSBTAP00000026766/1-1542 PQEASNHAQD CDDSMGYQYP FTLRVVQKDG NSCAWCPWYR FCRGCKIDCG bmy_19403T0/1-1411 PQEASNHAQD CDDSMGYQYP FTLRVVQKDG NSCAWCPWYR FCRGCKIDCG BACU013989/1-1619 PQEASNHAQD CDDSMGYQYP FTLRVVQKDG NSCAWCPWYR FCRGCKIDCG ENSTTRP00000008373/1-1585 PQEASNHAQD CDDSMGYQYP FTLRVVQKDG NSCAWCPWYR FCRGCKIDCG 1201 1250 ENSBTAP00000026766/1-1542 EDRAFIGNAY IAVDWDPTAL HLRYQTSQER VVDEHESVEQ SRRAQAEPIN bmy_19403T0/1-1411 EDRAFIGNAY IAVDWDPTAL HLRYQTSQER VIDEHESVEQ SRRAQAEPIN BACU013989/1-1619 EDRAFIGNAY IAVDWDPTAL HLRYQTSQER VVDEHESVEQ SRRAQAEPIN ENSTTRP00000008373/1-1585 EDRAFIGNAY IAVDWDPTAL HLRYQTSQER VVDEHESVEQ SRRAQAEPIN 1251 1300 ENSBTAP00000026766/1-1542 LDSCLRAFTS EEELGENEMY YCSKCKTHCL ATKKLDLWRL PPILIIHLKR bmy_19403T0/1-1411 LDSCLRAFTS EEELGENEMY YCSKCKTHCL ATKKLDLWRL PPILIIHLKR BACU013989/1-1619 LDSCLRAFTS EEELGENEMY YCSKCKTHCL ATKKLDLWRL PPILIIHLKR ENSTTRP00000008373/1-1585 LDSCLRAFTS EEELGENEMY YCSKCKTHCL ATKKLDLWRL PPILXXXXXX 1301 1350 ENSBTAP00000026766/1-1542 FQFVNGRWIK SQKIVKFPRE SFDPSAFLVP RAPALCQRRP LTPQGDDLSE bmy_19403T0/1-1411 FQFVNGRWIK SQKIVKFPRE SFDPSAFLVP RDPALCQRKP LTPQGDDLSE BACU013989/1-1619 FQFVNGRWIK SQKIVKFPRE SFDPSAFLVP RDPALCQRKP LTPQGGDLSE ENSTTRP00000008373/1-1585 XXXXXXXXXX SQKIVKFPRE SFDPSAFLVP RDPALCQRKP LTPQGDDLSE 1351 1400 ENSBTAP00000026766/1-1542 PRIPTGEVKK ADAQNSAGED VVLLSKSPSS LSANIVSSPK GSPSTSRKSG bmy_19403T0/1-1411 PRVLAGEVKK VDAQNSAGED NVLLSKSPSS LSANVISSPK GSPSSSRKSG BACU013989/1-1619 PRVLAGEVKK VDAQNSAGED NTLLSKSPSS LSANVISSPK GSPSSSRKSG ENSTTRP00000008373/1-1585 PRVLAGEVKK MDAQNSAGEA NMLLSKSPSS LSANVICSPK GSPSLSRKSG 1401 1450 ENSBTAP00000026766/1-1542 TSCPSSKNSS PNSSPRTLGR SKGRLRLPQI GSKNKLSSSK ENLDASKENG bmy_19403T0/1-1411 TSCPSSKNSS PNSSPRTIGR SKGRLRLPQI GSKNKLSSSK ENLDASKENG BACU013989/1-1619 TSCPSSKNSS PNSSPRTIGR SKGRLRLPQI GSKNKLSSSK ENLDASKENG ENSTTRP00000008373/1-1585 TSCPSSKNSS PNSSPRTIGR SKGRLRLPQI GSKNKLSSSK ENLDASKENG 1451 1500 ENSBTAP00000026766/1-1542 AGHVCELSDA LSRGHVLGGS QPELVTPQDH EVALANGFLY EHEACGNGYS bmy_19403T0/1-1411 AGQVCELADA LSRGHMLGGS QPELVTPQDH EVALANGFLY EHEACGNGYS BACU013989/1-1619 AGQVCELADA LSRGHMLGGS QPELVTPQDH EVALANGFLY EHEACGNGYS ENSTTRP00000008373/1-1585 AGQVCELADA LSRGHMLGGS QPELVTPQDH EVALANGFLY EHEACGNGYS 1501 1550 ENSBTAP00000026766/1-1542 NGQLENHSEE DSTDDQREDI HVKPIYNLYA ISCHSGILGG GHYVTYAKNP bmy_19403T0/1-1411 NGQFENHSEE DSTDDQREDI HVKPIYNLYA ISCHSGILGG GHYVTYAKNP BACU013989/1-1619 NGQFENHSEE DSTDDQREDI HVKPIYNLYA ISCHSGILGG GHYVTYAKNP ENSTTRP00000008373/1-1585 NGQFENHSEE DSTDDQREDI HVKPIYNLYA ISCHSGILGG GHYVTYAKNP 1551 1600 ENSBTAP00000026766/1-1542 NSKWYCYNDS SCKELHPDEI DTDSAYILFY EQQGIDYAQF LPKIDGKKMA bmy_19403T0/1-1411 NSRWYCYNDS SCKELHPDEI DTDSAYILFY EQQGIDYAQF LPKIDGKKMA BACU013989/1-1619 NSRWYCYNDS SCKELHPDEI DTDSAYILFY EQQGIDYAQF LPKIDGKKMA ENSTTRP00000008373/1-1585 NSRWYCYNDS SCKELHPDEI DTDSAYILFY EQQGIDYAQF LPKIDGKKMA 1601 1650 ENSBTAP00000026766/1-1542 DTSSMDEDFE SDYKKYCVLQ bmy_19403T0/1-1411 DTSSMDEDFE SDYKKYCVLQ BACU013989/1-1619 DTSSMDEDFE SDYKKYCVLQ ENSTTRP00000008373/1-1585 DTSSMDEDFE SDYKKYCVLQ