KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:13 2014 Check: 00 .. Name: ENSP00000278888/1-244 Len: 256 Check: 4626 Weight: 1.00 Name: ENSBTAP00000026773/1-243 Len: 256 Check: 4116 Weight: 1.00 Name: bmy_21445T0/1-252 Len: 256 Check: 4150 Weight: 1.00 Name: ENSTTRP00000008961/1-242 Len: 256 Check: 2303 Weight: 1.00 Name: BACU017284/1-198 Len: 256 Check: 8915 Weight: 1.00 // 1 50 ENSP00000278888/1-244 --------MD TESNRRANLA L--PQEPSSV PAFEVL-EIS PQEVSSGRLL ENSBTAP00000026773/1-243 --------ME AESRSRTELA LPTPQEPASA SEIELA-EIS LQE--SVLLE bmy_21445T0/1-252 MISISAGVSP VHTNILSFLE KEKKFLSQTR ETIQMHRVVS LHD--NDLLE ENSTTRP00000008961/1-242 --------MD TEIGRRTDLA LPNPQEPTSV PEIELA-VVS LHE---RTLE BACU017284/1-198 --------MD TEIGSRTNLA LPNPQVPTSA PEIELS-TVS LHD--NDLLE 51 100 ENSP00000278888/1-244 KSASSPPLHT WLTVLKKEQE FLGVTQILTA MICLCFGTVV CSVLDISHIE ENSBTAP00000026773/1-243 RPVPTAPRQT WLTVLKRELE FLGVTQILIG LIYLYFGIIV SAKINDSEFT bmy_21445T0/1-252 KAAPSPPRQT WLTFLKKELE FLGVTQILIS LICLYFGIIV CSVFNNSEFN ENSTTRP00000008961/1-242 KAAPSPPRQT WLTLLKKELE FLGVTQILIS LICFYFGIIV CSVFNNSEFK BACU017284/1-198 KAAPSPPRQT WLTFLKKELE FLG------- ---------- ---------- 101 150 ENSP00000278888/1-244 GDIFSSFKAG YPFWGAIFFS ISGMLSIISE RRNATYLVRG SLGANTASSI ENSBTAP00000026773/1-243 EKFFSSFKAG YPFWGALFFA ISGISSIMSE KKPSAYLIRG CLGANAVSGV bmy_21445T0/1-252 GDFFSSFKAG YPFWGAVFFA ISGFLSVMSE KKHATYLIRG SLGANTVSSI ENSTTRP00000008961/1-242 EEFFSSFKAG YPFWGTVFFA ISGFVSVMSE RKHAPYLIRG SLGANTVSSI BACU017284/1-198 ---------- --------FA ISGFLSVMSE KKHATYLIRG SLGANTVSSI 151 200 ENSP00000278888/1-244 AGGTGITILI INLKKSLAYI HIHSCQKFFE TK-CFMASFS TEIVVMMLFL ENSBTAP00000026773/1-243 AAGTGVGILI SNLKQSATY- -IYSCEEVFV NDYCSLACFS TEVVAMILFL bmy_21445T0/1-252 AGGTGIIILI INLKKSSAY- -IYHCWNIYE KDCCFMASIS TEIVAMILFL ENSTTRP00000008961/1-242 AGGIGIIILI INLKKSSAY- -IYHCRDIYE NDICFVASVS AEIVAMILFL BACU017284/1-198 AGGTGIIILI INLKKSSAY- -IYHCRDIYE NDFCIVASIS TEIVAMILFL 201 250 ENSP00000278888/1-244 TILGLGSAVS LTICGAGEEL KGNKVPEDRV YEELNIYSAT YSELEDPGEM ENSBTAP00000026773/1-243 TILGFGSAVS LIAYGIGEIL EGNQIPEDRL YEEVNIYAPI YSELEEREEP bmy_21445T0/1-252 TILGFCSAVS LTVYGIGEVI EGNKIPEDCL YEEVNTYAPI YSELEDGGEA ENSTTRP00000008961/1-242 TILGFCSAVS LTVYGIGEVI EGNKIPEDRL YEEVNIYAPI YSELEDGGEA BACU017284/1-198 TILGFCSAVS LTVYGIGEVI EGNKIPEDCL YEEVNTYAPT YSELEDRGEA 251 300 ENSP00000278888/1-244 SPPIDL ENSBTAP00000026773/1-243 TSPADS bmy_21445T0/1-252 TSPTDS ENSTTRP00000008961/1-242 TSPTDS BACU017284/1-198 TSPTDS