KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:16 2014 Check: 00 .. Name: ENSP00000246957/1-704 Len: 707 Check: 9593 Weight: 1.00 Name: ENSBTAP00000026786/1-703 Len: 707 Check: 8342 Weight: 1.00 Name: ENSTTRP00000016107/1-702 Len: 707 Check: 1398 Weight: 1.00 Name: bmy_02778T0/1-702 Len: 707 Check: 1680 Weight: 1.00 Name: BACU020519/1-677 Len: 707 Check: 1288 Weight: 1.00 // 1 50 ENSP00000246957/1-704 MARELRALLL WGRRLRPLLR APALAAVPGG KPILCPRRTT AQ-LGPRRNP ENSBTAP00000026786/1-703 MARELRMLLL WGRR----LR APALAAACGG KPVLCPWRPP AQSWGPPRSL ENSTTRP00000016107/1-702 MARELRTLLL WGCR----LR APALAVARGG KPVLCPWRPP AQSWSPRQNL bmy_02778T0/1-702 MARELRTLLM WGCR----LR APALAVARGG KPVLCPWRPP AQSWSPRQSL BACU020519/1-677 ---------- ---------- ---------G KPVLCPWRPP AQSWSPRQSL 51 100 ENSP00000246957/1-704 AWSLQAGRLF STQTAEDKEE --PLHSIISS TESVQGSTSK HEFQAETKKL ENSBTAP00000026786/1-703 ASSFHVGRPF SSQAAEDQAE AGPLHSVISS LEAVQGSATK HEFQAETKKL ENSTTRP00000016107/1-702 ASSSHVGRLF SSQAAEDRKE E-PLHSIISS SETVQGSVSK HEFQAETKKL bmy_02778T0/1-702 ASSSHVGRPF SSQAAEDRKE E-PLHSIISS SETVQGSVSK HEFQAETKKL BACU020519/1-677 ASSSHVGRPF SSQAAEDRKE E-PLHSIISS SETVQGSVSK HEFQAETKKL 101 150 ENSP00000246957/1-704 LDIVARSLYS EKEVFIRELI SNASDALEKL RHKLVSDGQA LPEMEIHLQT ENSBTAP00000026786/1-703 LDIVARSLYS EKEVFIRELI SNASDALEKL RHKLVSEGQA LPDMEIHLQT ENSTTRP00000016107/1-702 LDIVARSLYS EKEVFIRELI SNASDALEKL RHKLLSEGQA LPEMEIHLQT bmy_02778T0/1-702 LDIVARSLYS GKEVFIRELI SNASDALEKL RHKLVSEGQT LPEMEIHLQT BACU020519/1-677 LDIVARSLYS GKEVFIRELI SNASDALEKL RHKLVSEGQT LPEMEIHLQT 151 200 ENSP00000246957/1-704 NAEKGTITIQ DTGIGMTQEE LVSNLGTIAR SGSKAFLDAL QNQAEASSKI ENSBTAP00000026786/1-703 DADRGTITIQ DTGVGMSREE LVSNLGTIAR SGSKAFLDAL QNQAEAGSKI ENSTTRP00000016107/1-702 DAEKGTITIQ DTGIGMTQEE LVSNLGTIAR SGSKAFLDAL QSQAEASSKI bmy_02778T0/1-702 DAEKGTITIQ DTGIGMTQEE LVSNLGTIAR SGSKAFLDAL QSQAEASSKI BACU020519/1-677 DAEKGTITIQ DTGIGMTQEE LVSNLGTIAR SGSKAFLDAL QSQAEASSKI 201 250 ENSP00000246957/1-704 IGQFGVGFYS AFMVADRVEV YSRSAAPGSL GYQWLSDGSG VFEIAEASGV ENSBTAP00000026786/1-703 IGQFGVGFYS AFMVADRVEV YSRSVDAGSL GYRWLSDGSG VFEVAEASGV ENSTTRP00000016107/1-702 IGQFGVGFYX XXXXXXXXXX XXXXXXXXXX XXXXXXXXSG VFEIAEASGV bmy_02778T0/1-702 IGQFGVGFYS AFMVADRVEV YSRSVDAGSP GYQWLSDGSG VFEIAEASGV BACU020519/1-677 IGQFGVGFYS AFMVADRVEV YSRSVDAGSP GYQWLSDGSG VFEIAEASGV 251 300 ENSP00000246957/1-704 RTGTKIIIHL KSDCKEFSSE ARVRDVVTKY SNFVSFPLYL NGRRMNTLQA ENSBTAP00000026786/1-703 RTGTKIIIHL KADSREFASE ARVRDVVTKY SNFVSFPLYL NGRRMNTLQA ENSTTRP00000016107/1-702 RTGTKIVIHL RADSREFTSE ARVRDVVTKY SKFVSFPLYM NGRRLNTLQA bmy_02778T0/1-702 RTGTKIIIHL RADSREFTSE ARVRDVVTKY SKFVSFPLYL NGRRINTLQA BACU020519/1-677 RTGTKIIIHL RADSREFTSE ARVRDVVTKY SKFVSFPLYL NGRRINTLQA 301 350 ENSP00000246957/1-704 IWMMDPKDVR EWQHEEFYRY VAQAHDKPRY TLHYKTDAPL NIRSIFYVPD ENSBTAP00000026786/1-703 IWMMDPKDVG EGQHEEFYRY VAQAHDRPRY TLHYRTDAPL SIRSIFYVPD ENSTTRP00000016107/1-702 IWMMDPKDVG EGQHEEFYRY IAQAHDKPRY TLHYKTDAPL NIRSLFYVPE bmy_02778T0/1-702 IWMMDPKDVG EGQHEEFYRY IAQAHDKPRY TLHYKTDAPL NIRSLFYVPE BACU020519/1-677 IWMMDPKDVG KGQHEEFYRY IAQAHDKPRY TLHYKTDAPL NIRSLFYVPE 351 400 ENSP00000246957/1-704 MKPSMFDVSR ELGSSVALYS RKVLIQTKAT DILPKWLRFI RGVVDSEDIP ENSBTAP00000026786/1-703 AKPSMFDVSR ELGSSVSLYS RKVLIQTKAT NILPTWLRFV RGVVDSEDIP ENSTTRP00000016107/1-702 TKPTMFDMSR ELGSSVSLYS RKVLIQTKAT NILPTWLRFI RGVVDSEDIP bmy_02778T0/1-702 TKPTMFDMSR ELGSSVSLYS RKVLIQTKAT NILPTWLRFI RGVVDSEDVP BACU020519/1-677 TKPTMFDMSR ELGSSVSLYS RKVLIQTKAT NILPTWLRFI RGVVDSEDVP 401 450 ENSP00000246957/1-704 LNLSRELLQE SALIRKLRDV LQQRLIKFFI DQSKKDAEKY AKFFEDYGLF ENSBTAP00000026786/1-703 LNLSRELLQE SALIRKLQGV LQQRLIKFFT DQSKKDAEKY ARFFEDYGLF ENSTTRP00000016107/1-702 LNLSRELLQE SALIRKLRGV LQQRLIKFFI DQSKKHAEKY AKFFEDYGLF bmy_02778T0/1-702 LNLSRELLQE SALIRKLQGV LQQRLIKFFI DQSKKDAEKY AKFFEDYGLF BACU020519/1-677 LNLSRELLQE SALIRKLQGV LQQRLIKFFI DQSKKDAEKY AKFFEDYGLF 451 500 ENSP00000246957/1-704 MREGIVTATE QEVKEDIAKL LRYESSALPS GQLTSLSEYA SRMRAGTRNI ENSBTAP00000026786/1-703 VREGIVTTAE QEVKEDIAKL LRYESSALPA GQLTSLSDYA SRMQAGTRNI ENSTTRP00000016107/1-702 MREGIVTTAE QEVKEDIAKL LRYESSALPA GQLTSLPDYA SRMQAGTRSI bmy_02778T0/1-702 MREGIVTTAE QEVKEDIAKL LRYESSALPA GQLTSLPDYA SRMQAGTRSI BACU020519/1-677 MREGIVTTAE QEVKEDIAKL LRYESSALPA GQLTSLPDYA SRMQAGTRSI 501 550 ENSP00000246957/1-704 YYLCAPNRHL AEHSPYYEAM KKKDTEVLFC FEQFDELTLL HLREFDKKKL ENSBTAP00000026786/1-703 YYLCAPNRHL AEHSPYYEAM KRKNTEVLFC YEQFDELTLL HLREFDKKKL ENSTTRP00000016107/1-702 YYLCAPNRHL AEHSPYYEAM KWKNTEVLFC YEQFDELTLL HLREFDKKKL bmy_02778T0/1-702 YYLCAPNRHL AEHSPYYEAM KWKNTEVLFC YEQFDELTLL HLREFDKKKL BACU020519/1-677 YYLCAPNRHL AEHSPYYEAM KWKNTEVLFC YEQFDELTLL HLREFDKKKL 551 600 ENSP00000246957/1-704 ISVETDIVVD HYKEEKFEDR SPAAECLSEK ETEELMAWMR NVLGSRVTNV ENSBTAP00000026786/1-703 ISVETDIVVD HYKEEKFEDG APAGDCLSEK ETEDLMAWMR NALGSRITDV ENSTTRP00000016107/1-702 MSVETDIVVD HYKEEKFEDG SPAGDRLSEK ETEDLMAWMR NALGSRVTNV bmy_02778T0/1-702 MSVETDIVVD HYKEEKFEDS SPAGDRLSEK ETEDLMAWMR NALGSRVTNV BACU020519/1-677 MSVETDIVVD HYKEEKFEDS SLAGDHLSEK ETEDLMAWMR NALGSRVTNV 601 650 ENSP00000246957/1-704 KVTLRLDTHP AMVTVLEMGA ARHFLRMQQL AKTQEERAQL LQPTLEINPR ENSBTAP00000026786/1-703 KVTLRLDTHP AMITVLEMGA ARHFLRMRQL AKTQEERAQL LQPTLEINPR ENSTTRP00000016107/1-702 KVTPRLDTHP AMITVLEMGA ARHFLRMQQL AKTQEERAQL LQPTLEINPR bmy_02778T0/1-702 KVTLRLDTHP AMITVLEMGA ARHFLRMQQL AKTQEERAQL LQPTLEINPR BACU020519/1-677 KVTLRLDTHP AMITVLEMGA ARHFLRMQQL AKTQEERAQL LQPTLEINPR 651 700 ENSP00000246957/1-704 HALIKKLNQL RASEPGLAQL LVDQIYENAM IAAGLVDDPR AMVGRLNELL ENSBTAP00000026786/1-703 HVLIKKLSQL RDSEPDLAQL LVDQIYENAM ITAGLIDDPR PMVGRLNQLL ENSTTRP00000016107/1-702 HTLIKKLSQL RDSEPDLAQL LVDQIYENAM ITAGLVDDPR PMVSRLNHLL bmy_02778T0/1-702 HTLIKKLSQL RDSEPDLAQL LVDQIYENAM ITAGLIDDPR PMVSRLNHLL BACU020519/1-677 HTLIKKLSQL RDSEPDLAQL LVDQIYENAM ITAGLVDDPR PMVSRLNHLL 701 750 ENSP00000246957/1-704 VKALERH ENSBTAP00000026786/1-703 VKALERH ENSTTRP00000016107/1-702 IKALDRH bmy_02778T0/1-702 IKVLDRH BACU020519/1-677 IKALDRH