KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:24 2014 Check: 00 .. Name: ENSTTRP00000009233/1-866 Len: 870 Check: 6309 Weight: 1.00 Name: BACU015218/1-837 Len: 870 Check: 8477 Weight: 1.00 Name: ENSBTAP00000026813/1-866 Len: 870 Check: 178 Weight: 1.00 Name: ENSP00000261514/1-866 Len: 870 Check: 265 Weight: 1.00 Name: bmy_15278T0/1-538 Len: 870 Check: 3951 Weight: 1.00 // 1 50 ENSTTRP00000009233/1-866 MESEQLFHRG YYRNSYNSIT SASSDEELLD GAGVIMDFQT SEDDNLLDGD BACU015218/1-837 ---------- --------MD AASDPYLPYD GGGDCIPLRE LHRR------ ENSBTAP00000026813/1-866 MESEQLFHRG YCRNSYNSIT SVSSDEELLD GAGVIMDFQT SEDDNLLDGD ENSP00000261514/1-866 MESEQLFHRG YYRNSYNSIT SASSDEELLD GAGVIMDFQT SEDDNLLDGD bmy_15278T0/1-538 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000009233/1-866 TAVGTHYTMT NGGSISSSTH LLDLLDEPIP GVGTYDDFHT IDWVRERCKD BACU015218/1-837 ---GTHYTMT NGGSISSSTH LLDLLDEPIP GVGTYDDFHT IDWVRERCKD ENSBTAP00000026813/1-866 TAVGTHYTMT NGGSISSSTH LLDLLDEPIP GVGTYDDFHT IDWVREKCKD ENSP00000261514/1-866 TAVGTHYTMT NGGSINSSTH LLDLLDEPIP GVGTYDDFHT IDWVREKCKD bmy_15278T0/1-538 --------MT NGGSISSSTH LLDLLDEPIP GVGTYDDFHT IDWVRERCKD 101 150 ENSTTRP00000009233/1-866 RERHRRINSK KKESAWEMTK SLYDAWSGWL VVTLTGLASG ALAGLIDIAA BACU015218/1-837 RERHRRINSK KKESAWEMTK SLYDAWSGWL VVTLTGLASG ALAGLIDIAA ENSBTAP00000026813/1-866 RERHRRINSK KKESAWEMTK SLYDAWSGWL VVTLTGLASG ALAGLIDIAA ENSP00000261514/1-866 RERHRRINSK KKESAWEMTK SLYDAWSGWL VVTLTGLASG ALAGLIDIAA bmy_15278T0/1-538 RERHRRINSK KKESAWEMTK SLYDAWSGWL VVTLTGLASG ALAGLIDIAA 151 200 ENSTTRP00000009233/1-866 DWMTDLKEGI CLSALWYNHE QCCWGSNETT FEERDKCPQW KTWAELIIGQ BACU015218/1-837 DWMTDLKEGI CLSALWYNHE QCCWGSNETT FEERDKCPQW KTWAELIIGQ ENSBTAP00000026813/1-866 DWMTDLKEGI CLSALWYNHE QCCWGSNETT FEERDKCPQW KTWAELIIGQ ENSP00000261514/1-866 DWMTDLKEGI CLSALWYNHE QCCWGSNETT FEERDKCPQW KTWAELIIGQ bmy_15278T0/1-538 DWMTDLKEGI CLSALWYNHE QCCWGSNETT FEERDKCPQW KTWAELIIGQ 201 250 ENSTTRP00000009233/1-866 AEGPGSYIMN YIMYIFWALS FAFLAVSLVK VFAPYACGSG IPEIKTILSG BACU015218/1-837 AEGPGSYIMN YIMYIFWALS FAFLAVSLVK VFAPYACGSG IPEIKTILSG ENSBTAP00000026813/1-866 AEGPGSYIMN YMMYIFWALS FAFLAVSLVK VFAPYACGSG IPEIKTILSG ENSP00000261514/1-866 AEGPGSYIMN YIMYIFWALS FAFLAVSLVK VFAPYACGSG IPEIKTILSG bmy_15278T0/1-538 AEGPGSYIMN YIMYIFWALS FAFLAVSLVK VFAPYACGSG IPEIKTILSG 251 300 ENSTTRP00000009233/1-866 FIIRGYLGKW TLMIKTITLV LAVASGLSLG KEGPLVHVAC CCGNIFSYLF BACU015218/1-837 FIIRGYLGKW TLMIKTITLV LAVASGLSLG KEGPLVHVAC CCGNIFSYLF ENSBTAP00000026813/1-866 FIIRGYLGKW TLMIKTVTLV LAVASGLSLG KEGPLVHVAC CCGNIFSYLF ENSP00000261514/1-866 FIIRGYLGKW TLMIKTITLV LAVASGLSLG KEGPLVHVAC CCGNIFSYLF bmy_15278T0/1-538 FIIRGYLGKW TLMIKTITLV LAVASGLSLG KEGPLVHVAC CCGNIFSYLF 301 350 ENSTTRP00000009233/1-866 PKYSTNEAKK REVLSAASAA GVSVAFGAPI GGVLFSLEEV SYYFPLKTLW BACU015218/1-837 PKYSTNEAKK REVLSAASAA GVSVAFGAPI GGVLFSLEEV GYYFPLKTLW ENSBTAP00000026813/1-866 PKYSTNEAKK REVLSAASAA GVSVAFGAPI GGVLFSLEEV SYYFPLKTLW ENSP00000261514/1-866 PKYSTNEAKK REVLSAASAA GVSVAFGAPI GGVLFSLEEV SYYFPLKTLW bmy_15278T0/1-538 PKYSTNEAKK REVLSAASAA GVSVAFGAPI GGVLFSLEEV SYYFPLKTLW 351 400 ENSTTRP00000009233/1-866 RSFFAALVAA FVLRSINPFG NSRLVLFYVE YHTPWYLFEL FPFILLGVFG BACU015218/1-837 RSFFAALVAA FVLRSINPFG NSRLVLFYVE YHTPWYLFEL FPFILLGVFG ENSBTAP00000026813/1-866 RSFFAALVAA FVLRSINPFG NSRLVLFYVE YHTPWYLFEL FPFILLGVFG ENSP00000261514/1-866 RSFFAALVAA FVLRSINPFG NSRLVLFYVE YHTPWYLFEL FPFILLGVFG bmy_15278T0/1-538 RSFFAALVAA FVLRSINPFG NSRLVLFYVE YHTPWYLFEL FPFILLGVFG 401 450 ENSTTRP00000009233/1-866 GLWGAFFIRA NIAWCRRRKS TKFGKYPVLE VIIVAAITAV AA----FPNP BACU015218/1-837 GLWGAFFIRA NIAWCRRRKS TTFGKYPVLE VIVVAAVTAV AAXXXXXXXX ENSBTAP00000026813/1-866 GLWGAFFIRA NIAWCRRRKS TKFGKYPVLE VIVVAAITAV VA----FPNP ENSP00000261514/1-866 GLWGAFFIRA NIAWCRRRKS TKFGKYPVLE VIIVAAITAV IA----FPNP bmy_15278T0/1-538 GLWGAFFIRA NIAWCRRRKS TKFGKYPVLE VIIVAAITAV AA----FPNP 451 500 ENSTTRP00000009233/1-866 YTRLNTSELI KELFTDCGPL ESSSLCDYRN DMNASKIVDD IPDRPAGLGV BACU015218/1-837 YTRLNTSEQI KELFTDCGPL ESSSLCDYRN DMNASKIVDD LPDRPAGLGV ENSBTAP00000026813/1-866 YTRLNTSELI KELFTDCGPL ESSSLCDYRN DMNASKIVDD IPDRPAGLGV ENSP00000261514/1-866 YTRLNTSELI KELFTDCGPL ESSSLCDYRN DMNASKIVDD IPDRPAGIGV bmy_15278T0/1-538 YTRLNTSELI KELFTDCGPL ESSSLCDYRN DMNASKIVDD IPDRPAGLGV 501 550 ENSTTRP00000009233/1-866 YSAIWQLCLA LIFKIIMTVF TFGIKXXXXX XXXXXXXXXX XXXXXXXXXX BACU015218/1-837 YSAIWQLCLA LIFKIIMTVF TFGIKVPSGL FIPSMAIGAI AGRIVGIAVE ENSBTAP00000026813/1-866 YSAIWQLCLA LIFKIIMTVF TFGIKVPSGL FIPSMAIGAI AGRIVGIAVE ENSP00000261514/1-866 YSAIWQLCLA LIFKIIMTVF TFGIKVPSGL FIPSMAIGAI AGRIVGIAVE bmy_15278T0/1-538 YSAIWQLCLA LIFKIIMTVF TFGIKVPSGL FIPSMAIGAI AGRIVGIAVE 551 600 ENSTTRP00000009233/1-866 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXGV TRMTVSLVVI BACU015218/1-837 QLAYYHHDWF IFKEWCEVGA DCITPGLYAM VGAAACLGGV TRMTVSLVVI ENSBTAP00000026813/1-866 QLAYYHHDWF IFKEWCEVGA DCITPGLYAM VGAAACLGGV TRMTVSLVVI ENSP00000261514/1-866 QLAYYHHDWF IFKEWCEVGA DCITPGLYAM VGAAACLGGV TRMTVSLVVI bmy_15278T0/1-538 QLAYYHHDWF IFKEWCEVGA DCITPGLYAM VGAAACLG-- ---------- 601 650 ENSTTRP00000009233/1-866 VFELTGGLEY IVPLMAAVMT SKWVGDAFGR EGIYEAHIRL NGYPFLDAKE BACU015218/1-837 VFELTGGLEY IVPLMAAVMT SKWVGDAFGR EGIYEAHIRL NGYPFLDAKE ENSBTAP00000026813/1-866 VFELTGGLEY IVPLMAAVMT SKWVGDAFGR EGIYEAHIRL NGYPFLDAKE ENSP00000261514/1-866 VFELTGGLEY IVPLMAAVMT SKWVGDAFGR EGIYEAHIRL NGYPFLDAKE bmy_15278T0/1-538 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000009233/1-866 EFTHTTLAAD VMRPRRSDPP LAVLTQDNMT VDDIENMINE TSYNGFPVIM BACU015218/1-837 EFTHTTLAAD VMRPRRSDPP LAVLTQDNMT VDDIENMINE TSYNGFPVIM ENSBTAP00000026813/1-866 EFTHTTLAAD VMRPRRSDPP LAVLTQDNMT VDDIENMINE TSYNGFPVIM ENSP00000261514/1-866 EFTHTTLAAD VMRPRRNDPP LAVLTQDNMT VDDIENMINE TSYNGFPVIM bmy_15278T0/1-538 ---------- ---------- ---------- ---------- ---NG----- 701 750 ENSTTRP00000009233/1-866 SKESQRLVGF ALRRDLTIAI ESARKKQEGI VGSSRVCFAQ HTPSLPAESP BACU015218/1-837 SKESQRLVGF ALRRDLTIAI ESARKKQEGT VGSSRVCFAQ HTPSLPAESP ENSBTAP00000026813/1-866 SRESQRLVGF ALRRDLTIAI ESARKKQEGI VGSSRVCFAQ HTPSLPAESP ENSP00000261514/1-866 SKESQRLVGF ALRRDLTIAI ESARKKQEGI VGSSRVCFAQ HTPSLPAESP bmy_15278T0/1-538 ---------- ALR------- ---------- ---------- ---------- 751 800 ENSTTRP00000009233/1-866 RPLKLRSILD MSPFTVTDHT PMEIVVDIFR KLGLRQCLVT HNGSVLGIIT BACU015218/1-837 RPLKLRSILD MSPFTVTDHT PMEIVVDIFR KLGLRQCLVT HNGTVLGIIT ENSBTAP00000026813/1-866 RPLKLRSILD MSPFTVTDHT PMEIVVDIFR KLGLRQCLVT HNGSLLGIIT ENSP00000261514/1-866 RPLKLRSILD MSPFTVTDHT PMEIVVDIFR KLGLRQCLVT HNGIVLGIIT bmy_15278T0/1-538 ---------- ---------- ---------- ---MRACVCA ---------- 801 850 ENSTTRP00000009233/1-866 KKNMVAHLEE LTRRAEPLTP PWYHHKKRYP PSYGPDGKPR PRVHNVQLSP BACU015218/1-837 KKNMVEHLEE LTRRAEPLV- -----MTQLL PRPGGRIQVS SDVLNPHCTS ENSBTAP00000026813/1-866 KKNMVAHLEE LTRRAEPLTP PWYHHKKRHP PSYGPDGKPR PRLHHVQLSS ENSP00000261514/1-866 KKNILEHLEQ LKQHVEPLAP PWHYNKKRYP PAYGPDGKPR PRFNNVQLNL bmy_15278T0/1-538 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000009233/1-866 VTSEGEEAGE EARLLSSTTL BACU015218/1-837 LQDELKMYWD VFGIVGFGNI ENSBTAP00000026813/1-866 AAEDGEEAGE EACLLSSSSL ENSP00000261514/1-866 TDEEREETEE EVYLLNSTTL bmy_15278T0/1-538 ---------- ----------