KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:30:24 2014 Check: 00 .. Name: ENSP00000380878/1-521 Len: 562 Check: 8094 Weight: 1.00 Name: ENSTTRP00000012095/1-535 Len: 562 Check: 125 Weight: 1.00 Name: bmy_00942T0/1-379 Len: 562 Check: 8134 Weight: 1.00 Name: ENSBTAP00000026818/1-512 Len: 562 Check: 1080 Weight: 1.00 // 1 50 ENSP00000380878/1-521 ---------- ---------- --------MS GRRFHLSTTD RVIKAVPFPP ENSTTRP00000012095/1-535 RPRGAETAGG EGGGARLAIC WREEAEGTMS GRNLHLSTTE RVIKAVPFPP bmy_00942T0/1-379 ---------- ---------- --------MS GRNLHLSTTE RVIK------ ENSBTAP00000026818/1-512 ---------- ---------- --------MS GRNLHLSTTE RVIKAVPFPP 51 100 ENSP00000380878/1-521 TQRLTFKEVF ENGKPKVDVL KNHLVKEGRL EEEVALKIIN DGAAILRQEK ENSTTRP00000012095/1-535 TQRLTLKEVF ENGKPKIDVL KNHLVKEGRL EEEVALKIIN DGAAILRQEK bmy_00942T0/1-379 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026818/1-512 TQRLSLKEVF ENGKPKIDVL KNHLVKEGRL EEEVALKIIN DGAAILRQEK 101 150 ENSP00000380878/1-521 TMIEVDAPIT VCGDIHGQFF DLMKLFEVGG SPSNTRYLFL GDYVDRGYFS ENSTTRP00000012095/1-535 TMIEVDAPIT VCGDIHGQFF DLMKLFEVGG SPSNTRYLFL GDYVDRGYFS bmy_00942T0/1-379 ---------- VCGDIHGQFF DLMKLFEVGG SPSNTRYLFL GDYVDRGYFS ENSBTAP00000026818/1-512 TMIEVDAPVT VCGDIHGQFF DLMKLFEVGG SPSNTRYLFL GDYVDRGYFS 151 200 ENSP00000380878/1-521 IECVLYLWSL KINHPKTLFL LRGNHECRHL TDYFTFKQEC RIKYSEQVYD ENSTTRP00000012095/1-535 IECVLFLWSL KINHPKTLFL LRGNHECRHL TEYFTFKQEC RIKYSEQVYD bmy_00942T0/1-379 IECVLFLWSL KINHPKTLFL LRGNHECRHL TEYFTFKQEC RIKYSEQ--- ENSBTAP00000026818/1-512 IECVLYLWSL KINHPKTLFL LRGNHECRHL TEYFTFKQEC RIKYSEQVYD 201 250 ENSP00000380878/1-521 ACMETFDCLP LAALLNQQFL CVHGGMSPEI TSLDDIRKLD RFTEPPAFGP ENSTTRP00000012095/1-535 ACMETFDCLP LAALLNQQFL CVHGGMSPEI TCLDDIRKLD RFKEPPAFGP bmy_00942T0/1-379 ---------- ---------- ---------- --------LD RFKEPPAFGP ENSBTAP00000026818/1-512 ACMETFDCLP LAALLNQQFL CVHGGMSPEI TCLDDIRKLD RFKEPPAFGP 251 300 ENSP00000380878/1-521 VCDLLWSDPS EDYGNEKTLE HYTHNTVRGC SYFYSYPAVC EFLQNNNLLS ENSTTRP00000012095/1-535 VCDLLWSDPS EDYGNEKTLE HYTHNTVRGC SYFYSYPAVC EFLQNNNLLS bmy_00942T0/1-379 VCDLLWSDPS EDYGNEKTLE HYTHNTVRGC SYFYR----- ---------- ENSBTAP00000026818/1-512 VCDLLWSDPS EDYGNEKTLE HYTHNTVRGC SYFYSYPAVC EFLQNNNLLS 301 350 ENSP00000380878/1-521 IIRAHEAQDA GYRMYRKSQA TGFPSLITIF SAPNYLDVYN NKAAVLKYEN ENSTTRP00000012095/1-535 IIRAHEAQDA GYRMYRKSQT TGFPSLITIF SAPNYLDVYN NKAAVLKYEN bmy_00942T0/1-379 ---------- -YRMYRKSQT TGFPSLITIF SAPNYLDVYN NKAAVLKYEN ENSBTAP00000026818/1-512 IIRAHEAQDA GYRMYRKSQM TGFPSLITIF SAPNYLDVYN NKAAVLKYEN 351 400 ENSP00000380878/1-521 NVMNIRQFNC SPHPYWLPNF MDVFTWSLPF VGEKVTEMLV NVLNICSDDE ENSTTRP00000012095/1-535 NVMNIRQFNC SPHPYWLPNF MDVFTWSLPF VGEKVTEMLV NILNICSDDE bmy_00942T0/1-379 NVMNIRQFNC SPHPYWLPNF MDVFTWSLPF VGEKVTEMLV NILNICSDDE ENSBTAP00000026818/1-512 NVMNIRQFNC SPHPYWLPNF MDVFTWSLPF VGEKVTEMLV NILNICSDDE 401 450 ENSP00000380878/1-521 LISDDEAEDH YIPSYQKGST TVRKEIIRNK IRAIGKMARV FSILRQESES ENSTTRP00000012095/1-535 LISDDEIE-- -------GGT TVRKEIIKNK IRAIGKMARV FSILREESES bmy_00942T0/1-379 LISDDEIE-- -------GGT TVRKEIIKNK IRAIGKMARV FSILREESES ENSBTAP00000026818/1-512 LISDDELE-- -------GGT TVRKEIIKNK IRAIGKMARV FSILREESES 451 500 ENSP00000380878/1-521 VLTLKGLTPT GTLPLGVLSG GKQTIETATV EAVEAREAIR GFSLQHKIRS ENSTTRP00000012095/1-535 VLTLKGLTPT GTLPLGVLSG GKQTIETXXX XXXXXXXXIR GFSLQHRIRS bmy_00942T0/1-379 VLTLKGLTPT GTLPLGVLSG GKQTIET--- -------AIR GFSLQHRIRS ENSBTAP00000026818/1-512 VLTLKGLTPT GTLPLGVLSG GKQTIET--- -------AIR GFSLQHRIRS 501 550 ENSP00000380878/1-521 FEEARGLDRI NERMPPRKDS IHAGGPMKSV TSAHSHAAHR SDQGKKAHS- ENSTTRP00000012095/1-535 FEEARGLDRI NERMPPRKDS QYFDGPVKLV ---QPNAAHR S-QGEKSQ-- bmy_00942T0/1-379 FEEARGLDRI NERMPPRKDS QYFDGPVKLV ---QPNAAHR SDKGRRASND ENSBTAP00000026818/1-512 FEEARGLDRI NERMPPRKDS QYFDGPVKLV ---QANAAHR SDKGRRASND 551 600 ENSP00000380878/1-521 ---------- -- ENSTTRP00000012095/1-535 ---------- -- bmy_00942T0/1-379 SEPCCGTGGS KT ENSBTAP00000026818/1-512 SEPCGGTGGS KT