KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:32 2014 Check: 00 .. Name: ENSTTRP00000007843/1-688 Len: 763 Check: 105 Weight: 1.00 Name: ENSP00000296603/1-695 Len: 763 Check: 292 Weight: 1.00 Name: BACU015018/1-663 Len: 763 Check: 5935 Weight: 1.00 Name: bmy_07487T0/1-625 Len: 763 Check: 5137 Weight: 1.00 Name: ENSBTAP00000026829/1-695 Len: 763 Check: 3129 Weight: 1.00 // 1 50 ENSTTRP00000007843/1-688 MSGAALGLEI VFVFFLALFL LHRYGDFKKQ HRLVIVGTLL AWYLCFLIVF ENSP00000296603/1-695 MSGAALGLEI VFVFFLALFL LHRYGDFKKQ HRLVIIGTLL AWYLCFLIVF BACU015018/1-663 MSGAALGLEI VFVFFLALFL LHRYGDFKKQ HRLVIVGTLL AWYLCFLIVF bmy_07487T0/1-625 MSGAALGLEI VFVFFLALFL LHRYGDFKKQ HRLVIVGTLL AWYLCFLIVF ENSBTAP00000026829/1-695 MSGAALGLEI VFVFFLALFL LHRYGDFKKQ HRLVIVGTLL AWYLCFLIVF 51 100 ENSTTRP00000007843/1-688 ILPLDVSTTI YNRCKHAAAN SSPTESSNIT GLYAAATPVP SQRPCFKPWS ENSP00000296603/1-695 ILPLDVSTTI YNRCKHAAAN SSPPENSNIT GLYATANPVP SQHPCFKPWS BACU015018/1-663 ILPLDVSTTI YNRCKHAAAN SSPTESSNIT GLYAAATPVP R--------- bmy_07487T0/1-625 ILPLDVSTTI YNRCKHAAAN SSPTESSNIT GLYAAATPVP SAHPCFKPWS ENSBTAP00000026829/1-695 ILPLDVSTTI YNRCKHAAAN SSPPEGSNMT GLYATATSVP SQHPCFKPWS 101 150 ENSTTRP00000007843/1-688 YIPDGIMPIF WRVVYWTSQF LTWILLPFMQ SYARSGGFSI TGKIKTALIE ENSP00000296603/1-695 YIPDGIMPIF WRVVYWTSQF LTWILLPFMQ SYARSGGFSI TGKIKTALIE BACU015018/1-663 ---------- ---------- ---ILLPFMQ SYARSGGFSI TGKIKTALIE bmy_07487T0/1-625 YIPDGIMPIF WRVVYWTSQF LTWILLPFMQ SYARSGGFSI TGKIKTALIE ENSBTAP00000026829/1-695 YIPDGIMPIF WRVVYWTSQF LTWILLPFMQ SYARSGGFSI TGKIKTALIE 151 200 ENSTTRP00000007843/1-688 NAIYYGTYLL IFGAFLIYVA VNPHLHLEWN QLQTIGIAAA NTWGLFLLVL ENSP00000296603/1-695 NAIYYGTYLL IFGAFLIYVA VNPHLHLEWN QLQTIGIAAA NTWGLFLLVL BACU015018/1-663 NAIYYGTYLL IFGAFLIYVA VNPHLHLEWN QLQTIGIAAA NTWGLFLLVL bmy_07487T0/1-625 NAIYYGTYLL IFGA------ ---------N QLQTIGIAAA NTWGLFLLVL ENSBTAP00000026829/1-695 NAIYYGTYLL IFGAFLIYVA VNPHLHLEWN QLQTIGIAAA NTWGLFLLVL 201 250 ENSTTRP00000007843/1-688 LLGYGLVEIP RSYWNGAKRG YLLMKTYFKA AKLMTEKADA EETLEDVMEX ENSP00000296603/1-695 LLGYGLVEIP RSYWNGAKRG YLLMKTYFKA AKLMTEKADA EENLEDAMEE BACU015018/1-663 LLGYGLVEIP RSYWNGAKRG YLLMKTYFKA AKLMTEKADA EETLEDVMEE bmy_07487T0/1-625 LLGYGLVEIP RSYWNGAKRG YLLMKTYFKA AKLMTEKADA EETLEDVMEE ENSBTAP00000026829/1-695 LLGYGLVEIP RSYWNGAKRG YLLMKTYFKA AKLMTEKADA EETLEDVMEE 251 300 ENSTTRP00000007843/1-688 XXXXXXXXXX XXXXXXXXXX XXXXCPVEYQ EKMGRNMDDY EDFDEKHNTY ENSP00000296603/1-695 VRKVNESIKY NHPLRKCVDT ILKKCPTEYQ EKMGRNMDDY EDFDEKHSIY BACU015018/1-663 VRKVNESIKY NHPLRKCVDT ILKKCPLEYQ EKMGRNMDDY EDFDEKHNTY bmy_07487T0/1-625 VRKVNESIKY NHPLRKCVDT ILKKCPIEYQ EKMGRNMDDY EDFDEKHNTY ENSBTAP00000026829/1-695 VRKVNESIKY NHPLRKCVDT ILKKCPIDYQ EKMGRNMDDY EDFDEKHNTY 301 350 ENSTTRP00000007843/1-688 PSEKSLVKLH KQVIYSVQRH RRTQVQWQIL LEQAFYLEDV AKNETSATCQ ENSP00000296603/1-695 PSEKSLVKLH KQVIYSVQRH RRTQVQWQIL LEQAFYLEDV AKNETSATHQ BACU015018/1-663 PSEKSLVKLH KQVIYSVQRH RRTQVQWQIL LEQAFYLEDV AKNETSATCQ bmy_07487T0/1-625 PSEKSLVKLH K------QRH RRTQVQWQIL LEQAFYLEDV AKNETSATCQ ENSBTAP00000026829/1-695 PSEKSLVKLH KQVIYSVQRH RRTQVQWQIL LEQAFYLEDV AKNETSATCQ 351 400 ENSTTRP00000007843/1-688 FVHTFQSPEP ENRFIQYFYN PTVEWYWECL LRPWFYRVLA VVLSIFSVIV ENSP00000296603/1-695 FVHTFQSPEP ENRFIQYFYN PTFEWYWECL LRPWFYKILA VVLSIFSVIV BACU015018/1-663 FVHTFQSPEP ENRFIQYFYN PTVEWYWECL LRPWFYRVLA VVLSIFSVIV bmy_07487T0/1-625 FVHTFQSPEP ENRFIQYFYN PTV------- ---------- ---------- ENSBTAP00000026829/1-695 FVHTFQSPEP ENRFIQYFYN PTVEWYWECL LRPWFYRILA VVLSIFSVIV 401 450 ENSTTRP00000007843/1-688 VWSECTFFST TPVLSLFAVF IQLAEKTYNY IYIEIACFLS IFFLSICVYS ENSP00000296603/1-695 VWSECTFFST TPVLSLFAVF IQLAEKTYNY IYIEIACFLS IFFLSICVYS BACU015018/1-663 VWSECTFFST TPVLSLFAVF IQLAEKTYNY IYIEIACFLS IFFLSICVYS bmy_07487T0/1-625 ---------- --------VF IQLAEKTYNY IYIEIACFLS IFFLSICVYS ENSBTAP00000026829/1-695 VWSECTFFST RPVLSLFAVF IQLAEKTYNY IYIEIACFLS IFFLSICVYS 451 500 ENSTTRP00000007843/1-688 TVFRIRVFNY YYLASHHQTD AYSLLFSGML FCRLTPPLCL NFLGLTHMDS ENSP00000296603/1-695 TVFRIRVFNY YYLASHHQTD AYSLLFSGML FCRLTPPLCL NFLGLTHMDS BACU015018/1-663 TVFRIRVFNY YYLASHHQTD AYSLLFSGI- ---------- ---------- bmy_07487T0/1-625 TVFRIRVFNY YYLASHHQTD AYSLLFSGML FCRLTPPLCL NFLGLTHMDS ENSBTAP00000026829/1-695 TVFRIRVFNY YYLASHHQTD AYSLLFSGML FCRLTPPLCL NFLGLTHMDS 501 550 ENSTTRP00000007843/1-688 SISHQNTQPT AYTSXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXLGT ENSP00000296603/1-695 SISHKNTQPT AYTSIMGSMK VLSFIADGFY IYYPMLVVIL CIATYFSLGT BACU015018/1-663 ---------- ---------- ---------- ---------- -------LGT bmy_07487T0/1-625 SISHQNTQPT AYTSIMGSMK VLSFIADGFY IYYPMLVVIL CIATYFSLGT ENSBTAP00000026829/1-695 SISHQNTQPT AYTSIMGSMK VLSFIADGFY IYYPMLVVIL CIATYFSLGT 551 600 ENSTTRP00000007843/1-688 RCLNLLGFQQ FMGDNDMTSD LVDEGKELIR REKRKRQRQE EGESRRRXXX ENSP00000296603/1-695 RCLNLLGFQQ FMGDDDMTSD LVNEGKELIR KEKRKRQRQE EGENRRREWK BACU015018/1-663 RCLNLLGFQQ FMGDNDMTSD LVDEGKELIR REKRKRQRQE EGENRRREWK bmy_07487T0/1-625 RCLNLLGFQQ FMGDNDMTSD LVDEGKELIR REKRKRQRQE EGENRRREWK ENSBTAP00000026829/1-695 RCLNLLGFQQ FMGDNDMTSD LVDEGKELIR REKRKRQRQE EGENRRREWK 601 650 ENSTTRP00000007843/1-688 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXASKYTRA NNRTERDRIE ENSP00000296603/1-695 ERYGHNREDS TRNRNIHTDP KESNFSDVNT NRSAFKYTRA NNRTERDRIE BACU015018/1-663 ERYGHSREDS TRNRNVHIDP KESNFSDIST NRSASKYTRA NNRTERDRIE bmy_07487T0/1-625 ERYGHSREDS TRNRNVHIDP KESNFSDI-- --TASKYTRA NNRTERDRIE ENSBTAP00000026829/1-695 ERYGHSREDS TRNRNVHIDP KESNFSEMST NRSTSKYTRA NNRTERDRIE 651 700 ENSTTRP00000007843/1-688 LLQDAEPLDF NAETFTDDPL ESESGR---- ---------- ---------- ENSP00000296603/1-695 LLQDAEPLDF NAETFTDDPL ESESGR---- ---------- ---------- BACU015018/1-663 LLQDAEPLDF NAETFTDDPL ESESGRQKSA MVDTSIMKHS HPLTPSQRLV bmy_07487T0/1-625 LLQDAEPLDF NAETFTDDPL ESESGR---- ---------- ---------- ENSBTAP00000026829/1-695 LLQDAEPLDF NAETFTDDPL ESESGR---- ---------- ---------- 701 750 ENSTTRP00000007843/1-688 ------YQPG G-------RY LSMSR----- ---------- ---------- ENSP00000296603/1-695 ------YQPG G-------RY LSMSRSDIFN DV-------- ---------- BACU015018/1-663 GWIDHILQTG GAVHLKPHTF QQLWHEQYLL DVFLFLLAVT LGTTWLCGQL bmy_07487T0/1-625 ------YQPG G-------RY LSMSRSRIFD DV-------- ---------- ENSBTAP00000026829/1-695 ------YQPG G-------RY LSMSRSRIFD DV-------- ---------- 751 800 ENSTTRP00000007843/1-688 ---------- --- ENSP00000296603/1-695 ---------- --- BACU015018/1-663 LGLAARCCVG PGT bmy_07487T0/1-625 ---------- --- ENSBTAP00000026829/1-695 ---------- ---