KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:32 2014 Check: 00 .. Name: BACU003513/1-749 Len: 777 Check: 1126 Weight: 1.00 Name: ENSP00000353701/1-737 Len: 777 Check: 997 Weight: 1.00 Name: bmy_07802T0/1-706 Len: 777 Check: 286 Weight: 1.00 Name: ENSTTRP00000006287/1-736 Len: 777 Check: 6437 Weight: 1.00 Name: ENSBTAP00000026834/1-730 Len: 777 Check: 2848 Weight: 1.00 // 1 50 BACU003513/1-749 MTSACLAWTA ARPSACCYPQ SASMPTTCHG LPGMEAWPCC CRPPLRPPTS ENSP00000353701/1-737 ---------- ---------- MADTQYILPN DIGVSSLD-- CREAFRLLSP bmy_07802T0/1-706 ---------- ---------- MPAKLASARL LAGGDARP-- GREA-RQLAG ENSTTRP00000006287/1-736 ---------- ---------- MADTQYILPN DIGVSSLD-- CREAFRLLLP ENSBTAP00000026834/1-730 ---------- ---------- MADTQYILPN DIGVSSLD-- CREAFRLLSS 51 100 BACU003513/1-749 MPCSAASSVR RTP------- ------TSCA SMPWLRALPR RNIR------ ENSP00000353701/1-737 TERLYAYHLS RAAWYGGLAV ----LLQTSP EAPYIYALLS RLFRAQDPDQ bmy_07802T0/1-706 GGGVRGAPMN GGSRKQEVSL RSEQLLQTSP EAPYIYALLS RLFRAQDPDQ ENSTTRP00000006287/1-736 TERLYAHHLS RAAWYGGLAV ----LLQTSP EAPYIYALLS RLFRAQDPDQ ENSBTAP00000026834/1-730 TERLYAHYLS RAAWYGGLAV ----LLQTSP EAPYIYALLS RLFRAQDPDQ 101 150 BACU003513/1-749 -RSWSTLQVS TPTWATTSPL VTPSLFPTCP RPRA------ --SLPLQEKL ENSP00000353701/1-737 LRQHALAEGL TEEEYQAFLV YAAGVYSNMG NYKSFGDTKF VPNLP-KEKL bmy_07802T0/1-706 LRQHALAEGL TEEEYQAFLV YTAGVYSNMG NYKSFGDTKF VPNLP-KEKL ENSTTRP00000006287/1-736 LRQHALAEGL TEEEYQAFLV YTAGVYSNMG NYKSFGDTKF VPNLP-KEKL ENSBTAP00000026834/1-730 LRQHALAEGL TEEEYQAFLV YAAGVYSNMG NYKSFGDTKF VPNLP-KEKL 151 200 BACU003513/1-749 ERVILGSKAA EQHPEEVRGL WQTCGELMFS LESRLRHLGL GKEGITTYFS ENSP00000353701/1-737 ERVILGSEAA QQHPEEVRGL WQTCGELMFS LEPRLRHLGL GKEGITTYFS bmy_07802T0/1-706 ERVILGSKAA EQHPEEVRGL WQACGELMFS LESRLRHLGL GKEGITTYFS ENSTTRP00000006287/1-736 ERVILGSKAA EQHPEEVGGL WQTCGELMFS LESRLRHLGL GKEGITTYFS ENSBTAP00000026834/1-730 ERVILGSEAA QQHPEEVRGL WQICGELMFS LESRLRHLGL GKEGITTYFS 201 250 BACU003513/1-749 GNCTMEDAKL AQDFLDSQNL SAYNTRLFKE VGQDGKPCYE VRLASVLSTE ENSP00000353701/1-737 GNCTMEDAKL AQDFLDSQNL SAYNTRLFKE VDGEGKPYYE VRLASVLGSE bmy_07802T0/1-706 GNCTMEDAKL AQDFLDSQNL SAYNTRLFKE VGQDGKPCYE VRLASVLSTE ENSTTRP00000006287/1-736 GNCTMEDAKL AQDFLDSQNL SAYNTRLFKE VGQDGKPCYE VRLASVLSTE ENSBTAP00000026834/1-730 GNCTMEDAKL AQDFLDSQNL SAYNTRLFKE VGQDGKLSYE VRLASVLGTE 251 300 BACU003513/1-749 PILDSEMNSK LKSYEFQGSN FRVTRGDYAP ILQKVVEHLE KAKAYAATSH ENSP00000353701/1-737 PSLDSEVTSK LKSYEFRGSP FQVTRGDYAP ILQKVVEQLE KAKAYAANSH bmy_07802T0/1-706 PILDSEMNSK LKSYEFQGSN FRVTRGDYAP ILQKVVEHLE KAKAYAATSH ENSTTRP00000006287/1-736 PILDSEMNSK LKSYEFQGSN FRVTRGDYAP ILQKVVEHLE KAKAYAATSH ENSBTAP00000026834/1-730 PNLDSEMTSK LKSYEFQGSH FRVTRGDYAP ILQKVVEQLE KAKAYAANSH 301 350 BACU003513/1-749 QEQMLAQYIE SFTHGSVEAH KKGSRFWIQD KGPIVESYIG FIESYRDPFG ENSP00000353701/1-737 QGQMLAQYIE SFTQGSIEAH KRGSRFWIQD KGPIVESYIG FIESYRDPFG bmy_07802T0/1-706 QEQMLAQYIE SFTHGSIEAH KKGSRFWIQD KGPIVESYIG FIESYRDPFG ENSTTRP00000006287/1-736 QEQMLAQYIE SFTHGSIEAH KKGSRFWIQD KAPIVESYIG FIESYRDPFG ENSBTAP00000026834/1-730 QEQMLAQYIE SFTQGSIEAH KKGSRFWIQD KGPIVESYIG FIESYRDPFG 351 400 BACU003513/1-749 SRGEFEGFVA MVNKAMSAKF EWLVASAEQL LKELPWPPAF EKDKFLTPDF ENSP00000353701/1-737 SRGEFEGFVA VVNKAMSAKF ERLVASAEQL LKELPWPPTF EKDKFLTPDF bmy_07802T0/1-706 SRGEFEGFVA MVNKAMSAKF EWLVASAEQL LKELPWPPAF EKDKFLTPDF ENSTTRP00000006287/1-736 SRGEFEGFVA MVNKAMSAKF ERLVASAEQL LKELPWPPAF EKDKFLTPDF ENSBTAP00000026834/1-730 SRGEFEGFVA MVNKAMSAKF EWLVASAEQL LKELPWPPAF EKDKFLTPDF 401 450 BACU003513/1-749 TSLDVLTFAG SGIPAGINIP NYDDLRQTEG FKNVSLGNVL AVAYATQREK ENSP00000353701/1-737 TSLDVLTFAG SGIPAGINIP NYDDLRQTEG FKNVSLGNVL AVAYATQREK bmy_07802T0/1-706 TSLDVLTFAG SGIPAGINIP NYDDLRQTEG FKNVSLGNVL AVAYATQREK ENSTTRP00000006287/1-736 TSLDVLTFAG SGIPAGINIP NYDDLRQTEG FKNVSLGNVL AVAYATQREK ENSBTAP00000026834/1-730 TSLDVLTFAG SGIPAGINIP NYDDLRQTEG FKNVSLGNVL AVAYATQREK 451 500 BACU003513/1-749 LTFLEEEDKD LYIRWKGPSF DVQVGLHELL GHGSGKLFVQ DEKGAFNFDQ ENSP00000353701/1-737 LTFLEEDDKD LYILWKGPSF DVQVGLHELL GHGSGKLFVQ DEKGAFNFDQ bmy_07802T0/1-706 LTFLEEEDKD LYIRWKGPSF DVQVGLHELL GHGSGKLFVQ DEKGAFNFDQ ENSTTRP00000006287/1-736 LTFLEEEDKD LYIRWKGPSF DVQVGLHELL GHGSGKLFVQ DEKGTFNFDQ ENSBTAP00000026834/1-730 LTFLEEEDKD LYIRWKGPSF DVQVGLHELL GHGSGKLFMQ DEKGAFNFDQ 501 550 BACU003513/1-749 ETVINPETGE QIQSWYRSGE TWDSKFSTIA SSYEECRAES VGLYLCLNPQ ENSP00000353701/1-737 ETVINPETGE QIQSWYRSGE TWDSKFSTIA SSYEECRAES VGLYLCLHPQ bmy_07802T0/1-706 ETVINPETGE QIQSWYRSGE TWDSKFSTIA SSYEECRAES VGLYLCLNPQ ENSTTRP00000006287/1-736 ETVINPETGE QIQSWYRSGE TWDSKFSTIA SSYEECRAES VGLYLCLNPQ ENSBTAP00000026834/1-730 ETVINPETGE QIQSWYRSGE TWDSKFSTIA SSYEECRAES VGLYLCLHPR 551 600 BACU003513/1-749 VLEIFGFEGA DAEDVVYVNW LNMVRAGLLA LEFYTPEASS WRQVGARGPL ENSP00000353701/1-737 VLEIFGFEGA DAEDVIYVNW LNMVRAGLLA LEFYTPEAFN WRQ------- bmy_07802T0/1-706 VLEIFGFEGA DAEDVVYVNW LNMVRAGLLA LEFYTPEASS WRQ------- ENSTTRP00000006287/1-736 VLEIFGFEGA DAEDVVYVNW LNMVRAGLLA LEFYTPEASS WRQ------- ENSBTAP00000026834/1-730 VLEIFGFEGA DAEDVVYVNW LNMVRAGLLA LEFYTPEASS WRQ------- 601 650 BACU003513/1-749 RREEPEAHMQ ARFVILRVLL EAGEGLVTVT PTTGSDGRPD AQVHLDRNKI ENSP00000353701/1-737 ------AHMQ ARFVILRVLL EAGEGLVTIT PTTGSDGRPD ARVRLDRSKI bmy_07802T0/1-706 ---------- ---------- ----GLVTVT PTTGSDGRPD AQVHLDRNKI ENSTTRP00000006287/1-736 ------AHMQ ARFVILRVLL EAGEGLVTVT PTTGSDGRPD AQVHLDRNKI ENSBTAP00000026834/1-730 ------AHMQ ARFVILRVLL EAGEGLVTVT PTTGSDGRPD ARVHLDRDKI 651 700 BACU003513/1-749 RTVGKPALER FLRRLQVLKS TGDVAGGRAL YEGYAAVTDA PPECFLSLRD ENSP00000353701/1-737 RSVGKPALER FLRRLQVLKS TGDVAGGRAL YEGYATVTDA PPECFLTLRD bmy_07802T0/1-706 RTVGKPALER FLRRLQVLKS TGDVAGGRAL YEGYAAVTDA PPECFLSLRD ENSTTRP00000006287/1-736 RTVGKPALER FLRRLQVLKS TGDVAGGRAL YEGYAAVTDA PPECFL-LRD ENSBTAP00000026834/1-730 RTVGKPALER FLRRLQVLKS TGDVAGGRAL YEGYAAVTDA PPECFLSLRD 701 750 BACU003513/1-749 TVLLRKEARK LIVQPNTRLK GSEVQLLEYE ASAAGLIRSF SERFPEDGPE ENSP00000353701/1-737 TVLLRKESRK LIVQPNTRLE GSDVQLLEYE ASAAGLIRSF SERFPEDGPE bmy_07802T0/1-706 TVLLR----- ---------- -SEVQLLEYE ASAAGLIRSF SERFPEDGPE ENSTTRP00000006287/1-736 TVLLRKEARK LIVQPNTRLE GSEVQLLEYE ASAAGLIRSF SERFPEDGPE ENSBTAP00000026834/1-730 TVLLRKEARK LIVQPNTRLE GSEVQLLEYE ASAAGLIRSF SERFLEDGPE 751 800 BACU003513/1-749 LEEILTQLAT ADARFWKCPS ETPSGQA ENSP00000353701/1-737 LEEILTQLAT ADARFWKGPS EAPSGQA bmy_07802T0/1-706 LEEILTQLAT ADARFWKCPS ETPSGQA ENSTTRP00000006287/1-736 LEEILTQLAT ADARFWKCPS ETPSGQA ENSBTAP00000026834/1-730 LEKILTQLAT ADAQCWKGPQ -------