KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:33 2014 Check: 00 .. Name: ENSP00000369375/1-1124 Len: 1157 Check: 6438 Weight: 1.00 Name: ENSBTAP00000026836/1-1125 Len: 1157 Check: 115 Weight: 1.00 Name: ENSTTRP00000005143/1-1156 Len: 1157 Check: 2388 Weight: 1.00 Name: bmy_10148T0/1-1020 Len: 1157 Check: 9823 Weight: 1.00 Name: BACU006636/1-1125 Len: 1157 Check: 9128 Weight: 1.00 // 1 50 ENSP00000369375/1-1124 ---------- ---------- ---------- --MDSLASLV LCGVSLLLSG ENSBTAP00000026836/1-1125 ---------- ---------- ---------- --MDSLAGLV LCGVSLLLSA ENSTTRP00000005143/1-1156 DANGKSQTSG CLKGSLGPHA HLWKLDGEIW GSMDSLAGLV LYGVSLLLSA bmy_10148T0/1-1020 ---------- ---------- ---------- ---------- --MFPLFLLA BACU006636/1-1125 ---------- ---------- ---------- --MDSLAGLV LYGVSLLLSA 51 100 ENSP00000369375/1-1124 TVEGAMDLIL INSLPLVSDA ETSLTCIASG WRPHEPITIG RDFEALMNQH ENSBTAP00000026836/1-1125 TVDGAMDLIL INSLPLVSDA ETSLTCIASG WRPHEPITIG RDFEALMNQH ENSTTRP00000005143/1-1156 TVDGAMDLIL INSLPLVSDA ETSLTCIASG WRPHEPIIIG RDFEALMNQH bmy_10148T0/1-1020 TVDGAMDLIL INSLPLVSDA ETSLTCIASG WRPHEPIIIG RDFEALMNQH BACU006636/1-1125 TVDGAMDLIL INSLPLVSDA ETSLTCIASG WRPHEPIIIG RDFEALMNQH 101 150 ENSP00000369375/1-1124 QDPLEVTQDV TREWAKKVVW KREKASKING AYFCEGRVRG EAIRIRTMKM ENSBTAP00000026836/1-1125 QDPLEVTQDA TREWAKKVVW KREKASKING AYFCEGRVRG QAIRIRTMKM ENSTTRP00000005143/1-1156 QDPLEVTQDA TREWAKKVVW KREKASTING AYFCEGRVRG EAIRIRTMKM bmy_10148T0/1-1020 QDPLEVTQDA TREWAKKVVW KREKASKING AYFCEGRVRG EAIRIRTMKM BACU006636/1-1125 QDPLEVTQDA TREWAKKVVW KREKASKING AYFCEGRVRG EAIRIRTMKM 151 200 ENSP00000369375/1-1124 RQQASFLPAT LTMTVDKGDN VNISFKKVLI KEEDAVIYKN GSFIHSVPRH ENSBTAP00000026836/1-1125 RQQASFLPAT LTMTVDRGDN VNISFKKVLI KEEDAVIYKN GSFIHSVPRH ENSTTRP00000005143/1-1156 RQQASFLPAT LTMTVDRGDN VNISFKKVLI KEEDAVIYKN GSFIHSVPRH bmy_10148T0/1-1020 RQQASFLPAT LTMTVDRGDN VNISFKKVLI KEEDAVIYKN ---------- BACU006636/1-1125 RQQASFLPAT LTMTVDRGDN VNISFKKVLI KEEDAVIYKN GSFIHSVPRH 201 250 ENSP00000369375/1-1124 EVPDILEVHL PHAQPQDAGV YSARYIGGNL FTSAFTRLIV RRCEAQKWGP ENSBTAP00000026836/1-1125 EVPDILEVQV PHAQPQDAGV YSARYIGGNL FTSAFTRLIV RRCEAQKWGP ENSTTRP00000005143/1-1156 EVPDILEVHL PHAQPQDAGV YSARYIGGNL FTSAFTRLIV RRCEAQKWGP bmy_10148T0/1-1020 ---------- ---------- ---------- ---------- ---------- BACU006636/1-1125 EVPDILEVHL PHAQPQDAGV YSARYIGGNL FTSAFTRLIV RRCEAQKWGP 251 300 ENSP00000369375/1-1124 ECNHLCTACM NNGVCHEDTG ECICPPGFMG RTCEKACELH TFGRTCKERC ENSBTAP00000026836/1-1125 ECNRICTACM NNGICHEDTG ECICPPGFMG RTCEKACEPH TFGRTCKERC ENSTTRP00000005143/1-1156 ECNRVCTACM NNGICHEDTG ECICPPGFMG RTCEKACELH TFGRTCKERC bmy_10148T0/1-1020 ---------- ---------- ---------- -----ACELH TFGRTCKERC BACU006636/1-1125 ECNRVCTACM NNGICHEDTG ECICPPGFMG RTCEKACELH TFGRTCKERC 301 350 ENSP00000369375/1-1124 SGQEGCKSYV FCLPDPYGCS CATGWKGLQC NEACHPGFYG PDCKLRCSCN ENSBTAP00000026836/1-1125 SEPEGCKSFV FCLPDPYGCS CATGWKGLQC NEACQPGYYG PDCKLRCSCT ENSTTRP00000005143/1-1156 SGPEGC-SYV XXXXXXXXXX XXXXXXXXXX XXXCQPGYYG PDCKLRCSCT bmy_10148T0/1-1020 SGPEGCKSYV FCLPDPYGCS CATGWKGLQC NEACQPGYYG PDCKLRCSCT BACU006636/1-1125 SGPEGCKSYV FCLPDPYGCS CATGWKGLQC NEACQPGYYG PDCKLRCSCT 351 400 ENSP00000369375/1-1124 NGEMCDRFQG CLCSPGWQGL QCEREGIQRM TPKIVDLPDH IEVNSGKFNP ENSBTAP00000026836/1-1125 NGEKCDRFQG CLCSPGRQGL QCEKEGVPRM TPKIEDLPDH IEVNSGKFNP ENSTTRP00000005143/1-1156 NGEMCDRFQG CLCSPGHQGL QCEKEGMPRM TPKIEDLPDH IEVNSGKFNP bmy_10148T0/1-1020 NGEMCDRFQG CLCSPGHQGL QCEKEGMPRM TPKIEDLPDH IEVNSGKFNP BACU006636/1-1125 NGEMCDRFQG CLCSPGHQGL QCEKEGMPRM TPKIEDLPDH IEVNSGKFNP 401 450 ENSP00000369375/1-1124 ICKASGWPLP TNEEMTLVKP DGTVLHPKDF NHTDHFSVAI FTIHRILPPD ENSBTAP00000026836/1-1125 ICKASGWPRP ANEEMTLVKP DGTVLRPKDF NHTGHLSVAT FTINRILPPD ENSTTRP00000005143/1-1156 ICKASGWPLP ANEEMTLVKP DGTVLHPKDF NHTGHLSVAT FTIHRILPPD bmy_10148T0/1-1020 ICKASGWPLP ANEEMTLVKP DGTVLHPKDF NHTGHLSVAT FTIHRILPPD BACU006636/1-1125 ICKASGWPLP ANEEMTLVKP DGTVLHPKDF NHTGHLSVAT FTIHRILPPD 451 500 ENSP00000369375/1-1124 SGVWVCSVNT VAGMVEKPFN ISVKVLPKPL NAPNVIDTGH NFAVINISSE ENSBTAP00000026836/1-1125 SGVWVCSVNT VSGMVEKPFN ISVKVLPKPL NAPKVIDTGH NFAVINISSE ENSTTRP00000005143/1-1156 SGVWVCSVNT VAGMVEKPFN VSVKVLPKPL NAPNVIDTGH NFAVINISSE bmy_10148T0/1-1020 SGVWVCSVNT VAGMVEKPFN VSVKVLPKPL NAPNVIDTGH NFAVINISSE BACU006636/1-1125 SGVWVCSVNT VAGMVEKPFN VSVKVLPKPL NAPNVIDTGH NFAVINISSE 501 550 ENSP00000369375/1-1124 PYFGDGPIKS KKLLYKPVNH YEAWQHIQVT NEIVTLNYLE PRTEYELCVQ ENSBTAP00000026836/1-1125 PYFGDGPIKS KKLLYKPVNH YEAWRHIQVT NEIVTLNYLE PRTEYELCVQ ENSTTRP00000005143/1-1156 PYFGDGPIKS KKLLYKPVNH YEAWRHIQVT NEIVTLNYLE PRTEYELCVQ bmy_10148T0/1-1020 PYFGDGPIKS KKLLYKPVNH YEAWRHIQVT NEIVTLNYLE PRTEYELCVQ BACU006636/1-1125 PYFGDGPIKS KKLLYKPVNH YEAWRHIQVT NEIVTLNYLE PRTEYELCVQ 551 600 ENSP00000369375/1-1124 LVRRGEGGEG HPGPVRRFTT ASIGLPPPRG LNLLPKSQTT LNLTWQPIFP ENSBTAP00000026836/1-1125 LVRRGEGGEG HPGPVRRFTT ASIGLPPPRG LSLLPKSQTT LNLTWQPIFP ENSTTRP00000005143/1-1156 LVRRGEGGEG HPGPVRRFTT ASIGLPPPRG LSLLPKSQTT LNLTWQPIFP bmy_10148T0/1-1020 LVRRGEGGEG HPGPVRRFTT ASIGLPPPRG LSLLPKSQTT LNLTWQPIFP BACU006636/1-1125 LVRRGEGGEG HPGPVRRFTT ASIGLPPPRG LSLLPKSQTT LNLTWQPIFP 601 650 ENSP00000369375/1-1124 SSEDDFYVEV ERRSVQ-KSD QQNIKVPGNL TSVLLNNLHP REQYVVRARV ENSBTAP00000026836/1-1125 SSEDDFYVEV ERRSVQMNSD QQNIKVPGNL TSVLLNNLHP REQYIVRARV ENSTTRP00000005143/1-1156 SSEDDFYVEV ERRSVLMNSD QQNIKVPGNL TSVLLNNLQP REQYIVRARV bmy_10148T0/1-1020 SSEDDFYVEV ERRSVLMNSD QQNIKVPGNL TSVLLNNLQP REQYIVRARV BACU006636/1-1125 SSEDDFYVEV ERRSVLMNSD QQNIKVPGNL TSVLLNNLQP REQYIVRARV 651 700 ENSP00000369375/1-1124 NTKAQGEWSE DLTAWTLSDI LPPQPENIKI SNITHSSAVI SWTILDGYSI ENSBTAP00000026836/1-1125 NTKAQGEWSE DLIAWTLSDI VPPQPENIKI FNITDSSAVI SWTILDGYSI ENSTTRP00000005143/1-1156 NTKAQGEWSE NLIAWTLSDI LPPQPENIKI SNITDSSAVI SWTILDGYSI bmy_10148T0/1-1020 NTKAQGEWSE DLIAWTLSDI LPPQPENIKI SNITDSSAVI SWTILDGYSI BACU006636/1-1125 NTKAQGEWSE DLIAWTLSDI LPPQPENIKI SNITDSSAVI SWTILDGYSI 701 750 ENSP00000369375/1-1124 SSITIRYKVQ GKNEDQHVDV KIKNATITQY QLKGLEPETA YQVDIFAENN ENSBTAP00000026836/1-1125 SAIIIRYKVQ GKNEDQHIDV KIKNATITQY QLKGLEPQTV YQVDIFAENN ENSTTRP00000005143/1-1156 SSIIIRYKVQ GKNEDQHIDV KIKNATITQY QLKGLEPQTA YQVDIFAENN bmy_10148T0/1-1020 SSIIIRYKVQ GKNEDQHIDV KIKNATITQY QLKGLEPQTA YQVDIFAENN BACU006636/1-1125 SSIIIRYKVQ GKNEDQHIDV KIKNATITQY QLKGLEPQTA YQVDIFAENN 751 800 ENSP00000369375/1-1124 IGSSNPAFSH ELVTLPESQA PADLGGGKML LIAILGSAGM TCLTVLLAFL ENSBTAP00000026836/1-1125 IGSSNPTSSH ELTTLSESQA PADLGGRKML LIAILGSAGM TCLTVLLAFL ENSTTRP00000005143/1-1156 IGSSNPTFSH ELMTLSESQA PADLGGGKML LIAILGSAGM TCLTVLLAFL bmy_10148T0/1-1020 IGSSNPTFSH ELMTLSESQA PADLGGGKML LIAILGSAGM TCLTVLLAFL BACU006636/1-1125 IGSSNPTFSH ELMTLSESQA PADLGGGKML LIAILGSAGM TCLTVLLAFL 801 850 ENSP00000369375/1-1124 IILQLKRANV QRRMAQAFQN VREEPAVQFN SGTLALNRKV KNNPDPTIYP ENSBTAP00000026836/1-1125 IMLQLKRANV QRRMAQAFQN VREEPAVQFN SGTLALNRKA KNNPDPTIYP ENSTTRP00000005143/1-1156 IMLQLKRANV QRRMAQAFQN VREEPAVQFN SGTLALNRKA KNNPDPTIYP bmy_10148T0/1-1020 IMLQLKRANV QRRMAQAFQN VREEPAVQFN SGTLALNRKA KNNPDPTIYP BACU006636/1-1125 IMLQLKRANV QRRMAQAFQN VREEPAVQFN SGTLALNRKA KNNPDPTIYP 851 900 ENSP00000369375/1-1124 VLDWNDIKFQ DVIGEGNFGQ VLKARIKKDG LRMDAAIKRM KEYASKDDHR ENSBTAP00000026836/1-1125 VLDWNDIKFQ DVIGEGNFGQ VLKARIKKDG LRMDAAIKRM KEYASKDDHR ENSTTRP00000005143/1-1156 VLDWNDIKFQ DVIGEGNFGQ VLKARIKKDG LRMDAAIKRM KEYASKDDHR bmy_10148T0/1-1020 VLDWNDIKFQ DVIGEGNFGQ VLKARIKKDG LRMDAAIKRM KEYASKDDHR BACU006636/1-1125 VLDWNDIKFQ DVIGEGNFGQ VLKARIKKDG LRMDAAIKRM KEYASKDDHR 901 950 ENSP00000369375/1-1124 DFAGELEVLC KLGHHPNIIN LLGACEHRGY LYLAIEYAPH GNLLDFLRKS ENSBTAP00000026836/1-1125 DFAGELEVLC KLGHHPNIIN LLGACEHRGY LYLAIEYAPH GNLLDFLRKS ENSTTRP00000005143/1-1156 DFAGELEVLC KLGHHPNIIN LLGACEHRGY LYLAIEYAPH GNLLDFLRKS bmy_10148T0/1-1020 DFAGELEVLC KLGHHPNIIN LLGACEHRGY LYLAIEYAPH GNLLDFLRKS BACU006636/1-1125 DFAGELEVLC KLGHHPNIIN LLGACEHRGY LYLAIEYAPH GNLLDFLRKS 951 1000 ENSP00000369375/1-1124 RVLETDPAFA IANSTASTLS SQQLLHFAAD VARGMDYLSQ KQFIHRDLAA ENSBTAP00000026836/1-1125 RVLETDPAFA IANSTASTLS SQQLLHFAAD VARGMDYLSQ KQFIHRDLAA ENSTTRP00000005143/1-1156 RVLETDPAFA IANSTASTLS SQQLLHFAAD VARGMDYLSQ KQFIHRDLAA bmy_10148T0/1-1020 RVLETDPAFA IANSTASTLS SQQLLHFAAD VARGMDYLSQ KQFIHRDLAA BACU006636/1-1125 RVLETDPAFA IANSTASTLS SQQLLHFAAD VARGMDYLSQ KQFIHRDLAA 1001 1050 ENSP00000369375/1-1124 RNILVGENYV AKIADFGLSR GQEVYVKKTM GRLPVRWMAI ESLNYSVYTT ENSBTAP00000026836/1-1125 RNILVGENYV AKIADFGLSR GQEVYVKKTM GRLPVRWMAI ESLNYSVYTT ENSTTRP00000005143/1-1156 RNILVGENYV AKIADFGLSR GQEVYVKKTM GRLPVRWMAI ESLNYSVYTT bmy_10148T0/1-1020 RNILVGENYV AKIADFGLSR GQEVYVKKTM GRLPVRWMAI ESLNYSVYTT BACU006636/1-1125 RNILVGENYV AKIADFGLSR GQEVYVKKTM GRLPVRWMAI ESLNYSVYTT 1051 1100 ENSP00000369375/1-1124 NSDVWSYGVL LWEIVSLGGT PYCGMTCAEL YEKLPQGYRL EKPLNCDDEV ENSBTAP00000026836/1-1125 NSDVWSYGVL LWEIVSLGGT PYCGMTCAEL YEKLPQGYRL EKPLNCDDEV ENSTTRP00000005143/1-1156 NSDVWSYGVL LWEIVSLGGT PYCGMTCAEL YEKLPQGYRL EKPLNCDDEV bmy_10148T0/1-1020 NSDVWSYGVL LWEIVSLGGT PYCGMTCAEL YEKLPQGYRL EKPLNCDDEV BACU006636/1-1125 NSDVWSYGVL LWEIVSLGGT PYCGMTCAEL YEKLPQGYRL EKPLNCDDEV 1101 1150 ENSP00000369375/1-1124 YDLMRQCWRE KPYERPSFAQ ILVSLNRMLE ERKTYVNTTL YEKFTYAGID ENSBTAP00000026836/1-1125 YDLMRQCWRE KPYERPSFAQ ILVSLNRMLE ERKTYVNTTL YEKFTYAGID ENSTTRP00000005143/1-1156 YDLMRQCWRE KPYERPSFAQ ILVSLNRMLE ERKTYVNTTL YEKFTYAGID bmy_10148T0/1-1020 YDLMRQCWRE KPYERPSFAQ ILVSLNRMLE ERKTYVNTTL YEKFTYAGID BACU006636/1-1125 YDLMRQCWRE KPYERPSFAQ ILVSLNRMLE ERKTYVNTTL YEKFTYAGID 1151 1200 ENSP00000369375/1-1124 CSAEEAA ENSBTAP00000026836/1-1125 CSAEEAA ENSTTRP00000005143/1-1156 CSAEEAA bmy_10148T0/1-1020 CSAEEAA BACU006636/1-1125 CSAEEAA