KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:34 2014 Check: 00 .. Name: bmy_06335T0/1-236 Len: 361 Check: 6058 Weight: 1.00 Name: ENSP00000356990/1-349 Len: 361 Check: 6085 Weight: 1.00 Name: ENSBTAP00000026839/1-348 Len: 361 Check: 6744 Weight: 1.00 Name: BACU003862/1-348 Len: 361 Check: 5177 Weight: 1.00 Name: ENSTTRP00000008693/1-349 Len: 361 Check: 7226 Weight: 1.00 // 1 50 bmy_06335T0/1-236 ---------- ---------- ---------M SKIAELSYQY Y--------- ENSP00000356990/1-349 MAVAVPPGRA AGSGWAWRPV ARDALLARAF HSCTELRGRF YLVGGLLAGG ENSBTAP00000026839/1-348 MAGAV--GEA RGSGWTWRPV AQDPLLARAF HSCTELRGRF YLVGGLLAGG BACU003862/1-348 MAGAL--GGT GGSGWTWRPV ARDPLLARAF HSCTELRGRF YLVGGLLAGG ENSTTRP00000008693/1-349 MAGAV--GGT GGSGWTWRPV ARDPLLARAF HSCTELRGRF YLVGGLLAGG 51 100 bmy_06335T0/1-236 --PPSQPNYI ---------- ---------- ---------- WHCPMSPFYP ENSP00000356990/1-349 AREPSSDTVV FDPARGQAVR LGARGSPPRS HHDAAPVDGR WLCVVGG--- ENSBTAP00000026839/1-348 AREPSSETVV FDPAGGQAVR VAARGGPRRS HHDAAPVGGR WLCVVGG--- BACU003862/1-348 AREPSSDMVV FDPAGGQAVR MGARGGPRRS HHDAALVGGR WLCVVGG--- ENSTTRP00000008693/1-349 AREPSSDMVV FDPAEDQAVR VGARGGPRRS HHDAAPVGGR WVCVVGG--- 101 150 bmy_06335T0/1-236 WQGG------ ---------W GK-----GST AP-------- ---------- ENSP00000356990/1-349 WDGSRRLATV TALDTERGVW EAWTGTPGDC PPAGLSSHTC TRISDRELQV ENSBTAP00000026839/1-348 WDGSHRSATV TALDTDRGVW EAWTAGSGSC PPAGLSSHTC TRISDRELRV BACU003862/1-348 WDGSRRLATV SALDTERGVW EAWTAAPGSC LPAGLSSHTC THLSDRELRV ENSTTRP00000008693/1-349 WDGSRRLATV SALDTERGVW EAWTAAPGSC SPAGLSSHTC TRLSDRELRV 151 200 bmy_06335T0/1-236 ---------- ----NIFQKT QLRPEFHS-- YKEEGYHTVS RSGHCAALLQ ENSP00000356990/1-349 AGREGGIHTQ RRYGSIYT-L RLDPSARTYC YKQEGCHTAS RSGHCAALLQ ENSBTAP00000026839/1-348 AGREGGTRTQ RRYGSIYT-L RLDPGARTYC FKEEGCHTAS RSGHCAALLQ BACU003862/1-348 AGREGGTRTQ RRYGSIYT-L RLDPGARTYC YKEEGYHTVS RSGHCAALLQ ENSTTRP00000008693/1-349 AGREGGTRTQ RRYGSIYT-L RLDPGARTYC YKEEGYHTVS RSGHCAALLR 201 250 bmy_06335T0/1-236 SPGPHPGHQL LLFGGCNSAE PEVAGHWSHG KIKEEPPVAP RLMEQLARLV ENSP00000356990/1-349 TPGPHPGHQL LLFGGCNLAE PEVAGHWSHG KIKEEPPVAP HLMEQLARLV ENSBTAP00000026839/1-348 SPGPHPGHQL LLFGGCNSAE PEVAGHWSHG KIKEEPPVAP HLMEKLSRLV BACU003862/1-348 SPGPHPGHQL LLFGGCDSAE PEVAGHWSHG KIKEEPPVAP CLMEQLARLV ENSTTRP00000008693/1-349 SPGPHPGHQL LLFGGCNSAE AEVAGHWSHG KIKEEPPAAP RLTEQLASLV 251 300 bmy_06335T0/1-236 SSGQGSRQGP RGLRHHSCSV VGPFAVLFGG ETLTRARDTI CNDLYIYDTR ENSP00000356990/1-349 SSGQGSQKGP HGLRHHSCSV VGPFAVLFGG ETLTRARDTI CNDLYIYDTR ENSBTAP00000026839/1-348 SSGQGSRQGP RGLRHHSCSV VGPFAVLFGG ETLTRARDTI CNDLYIYDTR BACU003862/1-348 SSGQGSRQGP RGLRHHSCSV VGPFAVLFGG ETLTRARDTI CNDLYIYDTR ENSTTRP00000008693/1-349 SSGQGSQQGP RGLRHHSCSV VGPFAVLFGG ETLTRARDTI CNDLYIYDTR 301 350 bmy_06335T0/1-236 EKGLNGKSPS LWFHFPCADH GLKRVGHRTC LWNDQLYLVG GFGEDGRTAS ENSP00000356990/1-349 ------TSPP LWFHFPCADR GMKRMGHRTC LWNDQLYLVG GFGEDGRTAS ENSBTAP00000026839/1-348 ------KSPA LWFHFPCADH RLKRVGHRTC LWNDQLYLVG GFGEDGRTAS BACU003862/1-348 ------KSPS LWFHFPCADH GLKRVGHRTC LWNDQLFLVG GFGEDGRTAS ENSTTRP00000008693/1-349 ------KSPS LWFHFPCADH GLKRVGHRTC LWNDQLYLVG GFGEDGRTAS 351 400 bmy_06335T0/1-236 PQVCILDLFI - ENSP00000356990/1-349 PQVCILD-FI - ENSBTAP00000026839/1-348 PQVCILDLFI - BACU003862/1-348 PQVCILDLFI - ENSTTRP00000008693/1-349 PQVCILDLFI R