KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:30:34 2014 Check: 00 .. Name: ENSBTAP00000026844/1-593 Len: 618 Check: 9986 Weight: 1.00 Name: bmy_07803T0/1-589 Len: 618 Check: 8135 Weight: 1.00 Name: BACU003514/1-593 Len: 618 Check: 1237 Weight: 1.00 Name: ENSTTRP00000016496/1-593 Len: 618 Check: 6986 Weight: 1.00 // 1 50 ENSBTAP00000026844/1-593 MAATSSSDSD GGKGESSEAN SKWLDSLSDS MANIHTFSAC LALADFHGDG bmy_07803T0/1-589 MAAASSSDSD SGRAESSEAS SKWLDAHYDP MANIHTFSAC LELADLHGDG BACU003514/1-593 MAAASSSDSD SGRAESSEAS SKWLDAHYDP MANIHTFSAC LELADLHGDG ENSTTRP00000016496/1-593 MAAASSSDSD SGRAESSEAS SKWLDAHYDP MANIHTFSAC LQLADLHGDG 51 100 ENSBTAP00000026844/1-593 EYKLAMGDLG PDGRQPRLKV LKGHTLVSQK PLPDLPAAAV TFLMASHEPR bmy_07803T0/1-589 EYKLVVGDLG PGGQQPRLKV LKGPTVLSES PLPALPAAAA TFLMDQHEPR BACU003514/1-593 EYKLVVGDLG PGGQQPRLKV LKGPTVLSES PLPALPAAAA TFLMEQHEPR ENSTTRP00000016496/1-593 EYKLVVGDLG PGGQQPRLKV LKGPTVLSES PLPALPAAAA TFFMEQHEPR 101 150 ENSBTAP00000026844/1-593 TPALAIASGP CVYVYKNLKP YFKFSLPSLP TNPLEQDLWN QAK--EDQID bmy_07803T0/1-589 TPALALASGP CVYVYKNLRP YFKFSLPQLP PNPLEQDLWN QAKEGEGRGA BACU003514/1-593 TPALALASGP CVYVYKNLRP YFKFTLPQLP PNPLEQDLWN QAK--EDRID ENSTTRP00000016496/1-593 TPALALASGP CVYVYKNLRP YFKFSLPQLP PNPLEQDLWN QAK--EDRID 151 200 ENSBTAP00000026844/1-593 PLTLKEMLEG I-REKA-EVP ---------- --------LS VQSL---RFL bmy_07803T0/1-589 FVCTVTQVRG LWRARAPEAP RGEGAAVEWP GEGSQAQGMQ VSVLCVSRFL BACU003514/1-593 PLTLKEMLEG I-REKA-EVP ---------- --------LS VQSL---RFL ENSTTRP00000016496/1-593 PLTLKEMLEG I-REKA-EVP ---------- --------LS VQSL---RFL 201 250 ENSBTAP00000026844/1-593 PLELSEMEAF VNQHKSKSIR RQTVITTMTT LKKNLADEDA VSCLVLGTEN bmy_07803T0/1-589 QLELSEMEAF VNQHKSKSIR RQTVITTMTT LKKNLADEDA VSCLVLGTEN BACU003514/1-593 QLELSEMEAF VNQHKSKSIR RQTVITTMTT LKKNLADEDA VSCLVLGTEN ENSTTRP00000016496/1-593 QLELSEMEAF VNQHKSKSIR RQTVITTMTT LKKNLADEDA VSCLVLGTEN 251 300 ENSBTAP00000026844/1-593 KELLVLDPEA FTILAKMSLP SVPAFLEASG QFDVEFRLAA ACRNGSIYIL bmy_07803T0/1-589 KELLVLDPEA FTVLAKMSLP SVPVFLEVSG QFDVEFRLAA ACRNGNIYML BACU003514/1-593 KELLVLDPEA FTVLAKMSLP SVPVFLEASG QFDVEFRLAA ACRNGNIYML ENSTTRP00000016496/1-593 KELLVLDPEA FTVLAKMSLP SVPVFLEVSG QFDVEFRLAA ACRNGNIYML 301 350 ENSBTAP00000026844/1-593 RRDSKRPKYC IELGAQPVGL VGVHKVLVVG SNQDSLHGFT YKGKRLWTVQ bmy_07803T0/1-589 RRDSKRPKYC IELSAQPVGL VRVHKVLVVG SNQDSLHGFT HKGKRLWTVQ BACU003514/1-593 RRDSKRPKYC IELSAQPVGL VRVHKVLVVG SNQDSLHGFT HKGKRLWTVQ ENSTTRP00000016496/1-593 RRDSKRPKYC IELSAQPVGL VRVHKVLVVG SNQDSLHSFT HKGKRLWTVQ 351 400 ENSBTAP00000026844/1-593 MPAAILAMNL LEQHSRGLQA VMAALANEEV RIYHDKVLLN VIRTPEAVTS bmy_07803T0/1-589 MPAAILTMNL LEQRSRGLQA VMAGLANGEV RIYRDKALLS VVRTPDAVTS BACU003514/1-593 MPAAILTMNL LEQRSRGLQA VMAGLANGEV RIYRDKALLS VVCTPDAVTS ENSTTRP00000016496/1-593 MPAAILTMNL LEQRSRGLQA VMAGLANGEV RIYRDKALLS IVRTPDAVTS 401 450 ENSBTAP00000026844/1-593 LCFGRYGRED NTLIMTTLGG GLIIKILKRT AVFAEGGGEA GPPPSQAIKL bmy_07803T0/1-589 LCFGRYGRED HTLIMTTQGG GLIIKILKRT AVFVEGGGEA GPPPAQAMKL BACU003514/1-593 LCFGRYGRED HTLVMTTRGG GLIIKILKRT AVFVEGGGEA GPPPAQAMKL ENSTTRP00000016496/1-593 LCFGRYGRED HTLIMTTRGG GLIIKILKRT AVFVEGGGEA GPPPAQAMKL 451 500 ENSBTAP00000026844/1-593 NVPRKTRLYV DQTLREREAG TAMHRTFQAD LYLLRLRAAR AYVQALESSL bmy_07803T0/1-589 NMPRKTRLYV DQTLREREAG TAMHRTFQAD LYLLRLRAAR AYVQALESSL BACU003514/1-593 NMPRKTRLYV DQTLREREAG TAMHRAFQAD LHLLRLRAAR ASVQALESSL ENSTTRP00000016496/1-593 NMPRKTRLYV DQTLREREAG TAMHRAFQAD LYLLRLRAAR AYAQALESSX 501 550 ENSBTAP00000026844/1-593 SPVSLTAREP LKLHAVVQGL GPTFKLTLHL QNTSTARPIL GLVVCFLYNE bmy_07803T0/1-589 SPVSATAREP LKLHAVVQGL GPTFKLTLHL QNTSTARPIL GLLVCFLYNE BACU003514/1-593 SPVSATAREP LKLHAVVQGL GPTFKLTLHL QNTSTARPIL GLLVCFLYNE ENSTTRP00000016496/1-593 XXXXXXXXXX XXXXXXVQGL GPTFKLTLHL QNTSTARPIL GLLVCFLYNE 551 600 ENSBTAP00000026844/1-593 VLYALPRAFF KVPLLVPGLN YPLETFVKSL SDKGISDIIK VLVLREGQST bmy_07803T0/1-589 GLYALPRAFF ---------- ---------- ---------K VLVLREGQSA BACU003514/1-593 GLYALPRAFF KVPLLVPGLN YPLETFVESL SDKGISDIIK VLVLREGQNA ENSTTRP00000016496/1-593 GLYALPRAFF KVPLLVPGLN YPLETFVESL SDKGISDIIK VLVLREGQSA 601 650 ENSBTAP00000026844/1-593 PLLSAHINMP MSEGLAAD bmy_07803T0/1-589 PLLSAHISMP VSEGLAAA BACU003514/1-593 PLLSAHISMP VSEGLAAA ENSTTRP00000016496/1-593 PLLSAHINMP VSEGLAAA