KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:40 2014 Check: 00 .. Name: ENSTTRP00000007364/1-444 Len: 482 Check: 1070 Weight: 1.00 Name: BACU019358/1-456 Len: 482 Check: 553 Weight: 1.00 Name: ENSBTAP00000026865/1-471 Len: 482 Check: 9838 Weight: 1.00 Name: bmy_20992T0/1-442 Len: 482 Check: 8015 Weight: 1.00 Name: ENSP00000350266/1-471 Len: 482 Check: 8532 Weight: 1.00 // 1 50 ENSTTRP00000007364/1-444 ---------- ---------- ---PPQDNLG EVVKEPERAQ EHCLPNFAGG BACU019358/1-456 ---------- ---------- ---PPQDNLG EVVKEPERAQ EHCLPNFAGG ENSBTAP00000026865/1-471 MERQAGGGIL SRFRKRLPLH RAGPPQENLG EVVKEPERAL EHCLPNFAGG bmy_20992T0/1-442 MDG--LGRRL RA-SLRLKRG RGGPPQDNLG EVVKEPERAQ EHCLPNFAGG ENSP00000350266/1-471 MEGQVVGRVF RLFQRRLLQL RAGPPQDNSG EALKEPERAQ EHSLPNFAGG 51 100 ENSTTRP00000007364/1-444 QHFFEYLLVV SLKKKPSGDD YEPTITYQFP KRENLLRGQQ EEEERLLGAI BACU019358/1-456 QHFFEYLLVV SLKKKPSVDD YEPTITYQFP KRENLLRGQQ EEEERLLGAI ENSBTAP00000026865/1-471 QHFFEYLLVV SLKRKHSGED YEPRIIYQFP KRENLLRGQQ EEEDRLLGAI bmy_20992T0/1-442 QHFFEYLLVV SLKKKPSGDD YEPTITYQFP KRENLLRGQQ EEEERLLGAI ENSP00000350266/1-471 QHFFEYLLVV SLKKKRSEDD YEPIITYQFP KRENLLRGQQ EEEERLLKAI 101 150 ENSTTRP00000007364/1-444 PLFCFPDGNE WAPLTEYPXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019358/1-456 PLFCFPDGNE WAPLTEYPRV EGEVEVSRTS AGANLSASTP ELGSERSPSE ENSBTAP00000026865/1-471 PLFCFPDGNE RAPLTECPRE TFSFVLTNVD GSRKIGYCRR LLPDGHGPRL bmy_20992T0/1-442 PLFCFPDGNE WAPLTEYPRE TFSFVLTNVD GSRKIGYCRR LLPAGRGPRL ENSP00000350266/1-471 PLFCFPDGNE WASLTEYPRE TFSFVLTNVD GSRKIGYCRR LLPAGPGPRL 151 200 ENSTTRP00000007364/1-444 XXXXXXXXXX XXXXXXXX-- -ILDEVEKRH QISMAVIYPF MQGLREAAFP BACU019358/1-456 WMQHVLVARK GHQCALPQAG PLKDEVEKRH QISMAVIYPF MQGLREAAFP ENSBTAP00000026865/1-471 PRVYCIISCI GCFGLFSK-- -ILDEVEKRH QISMAIIYPF MQGLREAAFP bmy_20992T0/1-442 PRVYCIISCI GCFGLFSK-- -ILDEVEKRH QISMAVIYPF MQGLREAAFP ENSP00000350266/1-471 PKVYCIISCI GCFGLFSK-- -ILDEVEKRH QISMAVIYPF MQGLREAAFP 201 250 ENSTTRP00000007364/1-444 AP----TVTS FIPXXXXXXX XXXXXX-XXX XXXXXXX--- ----XXXXXX BACU019358/1-456 APGKTVTLKS FIPDSGTEVA TSRHKLCDRH GSQTCFYRQP EQLLSVVGCR ENSBTAP00000026865/1-471 APGKTVTLKS FIPDSGTEFI SLTRPL-DSH LEHVDFR--- ----SLMRCL bmy_20992T0/1-442 APGKTVTLKS FIPDSGTEFI SLTRPL-DSH LEHVDFS--- ----SLLRCL ENSP00000350266/1-471 APGKTVTLKS FIPDSGTEFI SLTRPL-DSH LEHVDFS--- ----SLLHCL 251 300 ENSTTRP00000007364/1-444 XXXXXXXXXX XXXXXXXXXX XXXXXXTLSQ CIHAAAALLY PFSWAHTYIP BACU019358/1-456 GGSMGVEAQG GPSDSHSLCP VP---STLSQ CIHAAAALLY PFSWAHTYIP ENSBTAP00000026865/1-471 SFEQILQIFA SAVLERRIIF LAEGLSTLSQ CIHATAALLY PFSWAHTYIP bmy_20992T0/1-442 SFEQILQIFA SAVLERRIIF LAEGLSTLSQ CIHAAAALLY PFSWAHTYIP ENSP00000350266/1-471 SFEQILQIFA SAVLERKIIF LAEGLSTLSQ CIHAAAALLY PFSWAHTYIP 301 350 ENSTTRP00000007364/1-444 VVPESLLATV CCPTPFMVGV QMRFRQEVME SPMEEVLLVN LCEGTFLMSV BACU019358/1-456 VVPESLLATV CCPTPFMVGV QMRFRQEVME SPMEEVLLVN LCEGTFLMSV ENSBTAP00000026865/1-471 VVPESLLGTV CCPTPFMVGV QMRFRQEVLD SPMEEVLLVN LCEGTFLMSV bmy_20992T0/1-442 VVPESLLAT- ---------- ---------- -----VLLVN LCEGTFSMSV ENSP00000350266/1-471 VVPESLLATV CCPTPFMVGV QMRFQQEVMD SPMEEVLLVN LCEGTFLMSV 351 400 ENSTTRP00000007364/1-444 GDEKDILPPK LQEDILESLG QGIKGSQTSE QINEHVSGPF VQFFVKTVGH BACU019358/1-456 GDEKDILPPK LQEDILESLG QGIKGSQTSE QINEHVSGPF VQFFVKTVGH ENSBTAP00000026865/1-471 GDEKDILPPK LQDDILESLS QGIKESQTSE QINEHVSRPF VQFFVKTVGH bmy_20992T0/1-442 GDEKDILPPK LQEDILESLG QGIKGSQTSE QINEHVSGPF VQFFVKTVGH ENSP00000350266/1-471 GDEKDILPPK LQDDILDSLG QGINELKTAE QINEHVSGPF VQFFVKIVGH 401 450 ENSTTRP00000007364/1-444 YASYIKREAN GQGHFQERGF YKALTSKANR RFVKKFVKTQ LFSLFIQEAE BACU019358/1-456 YASYIKREAN GQSHFQERAF YKALTSKANR RFVKKFVKTQ LFSLFIQEAE ENSBTAP00000026865/1-471 YASYIKREAN GQGRFQERAF YKALTSKANR RFVKKFVKTQ LFSLFIQEAE bmy_20992T0/1-442 YASYIKREAN GQGHFQERAF YKALTSKANR RFVKKFVKTQ LFSLFIQEAE ENSP00000350266/1-471 YASYIKREAN GQGHFQERSF CKALTSKTNR RFVKKFVKTQ LFSLFIQEAE 451 500 ENSTTRP00000007364/1-444 KSKNPPAGYF QQKILEYEER KKQKKPKEKT LK BACU019358/1-456 KSKNPPAGYF QQKILEYEER KKQKKPKEKT LK ENSBTAP00000026865/1-471 KSKNPPADYF QKKIREYEEQ KKQKKPKEKT VK bmy_20992T0/1-442 KSKNPPAGYF QQKILEYEER KKQKKPKEKT LK ENSP00000350266/1-471 KSKNPPAGYF QQKILEYEEQ KKQKKPREKT VK