KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:44 2014 Check: 00 .. Name: ENSP00000219660/1-261 Len: 289 Check: 3464 Weight: 1.00 Name: ENSBTAP00000026884/1-289 Len: 289 Check: 5310 Weight: 1.00 Name: BACU020312/1-260 Len: 289 Check: 3159 Weight: 1.00 Name: bmy_18214T0/1-248 Len: 289 Check: 6293 Weight: 1.00 Name: ENSTTRP00000014466/1-263 Len: 289 Check: 8254 Weight: 1.00 // 1 50 ENSP00000219660/1-261 ---------- ---------- ------MSGE IA--MCEPEF GNDKAREPSV ENSBTAP00000026884/1-289 VSCPGQQVWV SQPGQDRVPP RVISAPMFTE AAVSMCDLES GSVKVKEPSN BACU020312/1-260 ---------- ---------- ---------Q AAASMCDLEF GGVKVKEPSE bmy_18214T0/1-248 ---------- ---------- ------MSAE AAASMCDLEF GGVKVKEPSE ENSTTRP00000014466/1-263 ---------- ---------- ------MSAE AAASMCDLEF GGVKVKEPSE 51 100 ENSP00000219660/1-261 GGRWRVSWYE RFVQPCLVEL LGSALFIFIG CLSVIENGTD TGLLQPALAH ENSBTAP00000026884/1-289 RGRWHGCWYE RLVQPCLVEL LGSALFIFIG CLSVIENGPD TGRLQPALAH BACU020312/1-260 GGRWRGCWYE WFVQPCLVEL LGSALFIFIG CLSVIENGTD AGLLQPALAH bmy_18214T0/1-248 GGRWRGCWYE RFVQPCLVEL LGSALFIFIG CLSVIENGTD TGLLQPALAH ENSTTRP00000014466/1-263 GGRWRGCWYE RFVQPCLVEL LGSALFIFIG CLSVIENGTD TGLLQPALAH 101 150 ENSP00000219660/1-261 GLALGLVIAT LGNISGGHFN PAVSLAAMLI GGLNLVMLLP YWVSQLLGGM ENSBTAP00000026884/1-289 GLALGLVIAT LGNISGGHFN PAVSLAAMLV GGLKLTMLFP YWISQLCGGL BACU020312/1-260 GLALGLVIAT LGNISGGHFN PVVSLAAVLV GGLHLPMLLP YWISQLCGGL bmy_18214T0/1-248 GLALGLVITT LGNISGGHFN PAVSLAAMLV GGLHLTMLLP YWISQLCGGL ENSTTRP00000014466/1-263 GLALGLVIAT LGSISGGHFN PAVSLAAMLV GGLHLMMLLP YWISQLCGGL 151 200 ENSP00000219660/1-261 LGAALAKAVS PEERFWNASG AAFVTVQEQG QVAGALVAEI ILTTLLALAV ENSBTAP00000026884/1-289 IGATLAKAVS PEDRFWNATG AAFVTVQESE QVAGAVVAEV ILTTLLVLTV BACU020312/1-260 IGAALAKAVS SEERFWNASG AAFVTVQEPR QVTGAVVAEI ILTTLLALAV bmy_18214T0/1-248 IGAALAKAVS SEERFWNASG AAFVTVQEPR QVTGAVVAEI ILTTLLALAV ENSTTRP00000014466/1-263 IGAALAKAVS SEERFWNASG AAFVTVQEPR QVTGAVVAEI ILTTLLALAV 201 250 ENSP00000219660/1-261 CMGAINEKTK GPLAPFSIGF AVTVDILAGG PVSGGCMNPA RAFGPAVVAN ENSBTAP00000026884/1-289 CTGAINEKTL GPLAPFCIGF SVTVDILAGG AVSGACMNPA RAFGPAMVAN BACU020312/1-260 CMGAINEKTQ GPLAPFSIGF SVTVDILAGG AVSGACMNPA RAFGPAVVAN bmy_18214T0/1-248 CMGAINEKTQ GPLAPFSIGF SVTVDILAGG AVSGACMNPA RAFGPAVVAN ENSTTRP00000014466/1-263 CMGTINEKTQ GPLAPFSIGF SVTVDILAGG AVSGACMNPA RAFGPAVVAN 251 300 ENSP00000219660/1-261 HWNFHWIYWL GPLLAGLLVG LLIRCFIGDG KTRLILKAR ENSBTAP00000026884/1-289 HWDYHWIYWL GPLLASLLVG VLIRFFIGDA KIRLILKGR BACU020312/1-260 HWDFHWIYWL GPLLASLLVG VLIRFFIGDG KTRLILKGR bmy_18214T0/1-248 HWDFHWIYWL GPLLASLLVG VLIR------ --------- ENSTTRP00000014466/1-263 HWDFHWIYWL GPLLASLLVG VLIRFFIGDG KTRLILKGR