KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:46 2014 Check: 00 .. Name: ENSP00000412324/1-555 Len: 598 Check: 5683 Weight: 1.00 Name: bmy_18309T0/1-502 Len: 598 Check: 7054 Weight: 1.00 Name: ENSBTAP00000026895/1-524 Len: 598 Check: 9704 Weight: 1.00 Name: ENSTTRP00000004244/1-531 Len: 598 Check: 7886 Weight: 1.00 Name: BACU007672/1-449 Len: 598 Check: 8706 Weight: 1.00 // 1 50 ENSP00000412324/1-555 MPNKNKKEKE SPKAGKSGKS SKEGQDTVES EGTSPEEPSS PKVPPPL--- bmy_18309T0/1-502 ---------- ----MQGNRP DSRGISSL-- --CVPSSPRA HGPGCPVTWR ENSBTAP00000026895/1-524 ---------- ---MLTCNKA GSR------- --MVVDAASS NGPFQPV--- ENSTTRP00000004244/1-531 ---------E SPKAGKSGKS SKEGQDIIES E-QIPSRKNS LVAAPSAVSS BACU007672/1-449 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000412324/1-555 LPELLVLIFG GLQ------- ---------- -----GRDVP PADQEKLFIQ bmy_18309T0/1-502 LLSLLTLRPY LWK------- ---------- -----RSSSH PPGSYSVLTV ENSBTAP00000026895/1-524 ---------A LLH------- ---------- -----IRDVP PADQEKLFIQ ENSTTRP00000004244/1-531 KVKVPAPQPV VTKDKRQNSS RFSASNNREL QKLPSLKDVP PADQEKLFIQ BACU007672/1-449 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000412324/1-555 KLRQCCVLFD FVSDPLSDLK WKEVKRAALS EMVEYITHNR NVITEPIYPE bmy_18309T0/1-502 AALVTVTAED FGREAVHDLR ---------- ------CEAA SAIFSPFS-- ENSBTAP00000026895/1-524 KLRQCCVLFD FVSDPLSDLK WKEVKRAALS EMVEYITHNR NVITEPIYPE ENSTTRP00000004244/1-531 KLRQCCVLFD FVSDPLSDLK WKEVKRAALS EMVEYITHNR NVITEPIYPE BACU007672/1-449 ---------- ---------- ---------- -MVEYITHNR NVITEPIYPE 151 200 ENSP00000412324/1-555 VVHMFAVNMF RTLPPSSNPT GAEFDPEEDE PTLEAAWPHL QLVYEFFLRF bmy_18309T0/1-502 ----FAVNMF RTLPPSSNPT GAEFDPEEDE PTLEAAWPHL QLVYEFFLRF ENSBTAP00000026895/1-524 VVHMFAVNMF RTLPPSSNPT GAEFDPEEDE PTLEAAWPHL QLVYEFFLRL ENSTTRP00000004244/1-531 VVHMFAVNMF RTLPPSSNPT GAEFDPEEDE PTLEAAWPHL QLVYEFFLRF BACU007672/1-449 VVHMFAVNMF RTLPPSSNPT GAEFDPEEDE PTLEAAWPHL QLVYEFFLRF 201 250 ENSP00000412324/1-555 LESPDFQPNI AKKYIDQKFV LQLLELFDSE DPRERDFLKT TLHRIYGKFL bmy_18309T0/1-502 LESPDFQPNI AKKYIDQKFV LQLLELFDSE DPRERDFLKT TLHRIYGKFL ENSBTAP00000026895/1-524 LESPDFQPNI AKKYIDQKFV LQLLELFDSE DPRERDFLKT TLHRIYGKFL ENSTTRP00000004244/1-531 LESPDFQPNI AKKYIDQKFV LQLLELFDSE DPRERDFLKT TLHRIYGKFL BACU007672/1-449 LESPDFQPNI AKKYIDQKFV LQLLELFDSE DPRERDFLKT TLHRIYGKFL 251 300 ENSP00000412324/1-555 GLRAYIRKQI NNIFYRFIYE TEHHNGIAEL LEILGSIING FALPLKEEHK bmy_18309T0/1-502 GLRAYIRKQI NNIFYRFIYE TEHHNGIAEL LEILGSIING FALPLKEEHK ENSBTAP00000026895/1-524 GLRAYIRKQI NNIFYRFIYE TEHHNGIAEL LEILGSIING FALPLKEEHK ENSTTRP00000004244/1-531 GLRAYIRKQI NNIFYRFIYE TEHHNGIAEL LEILGSIING FALPLKEEHK BACU007672/1-449 GLRAYIRKQI NNIFYRFIYE TEHHNGIAEL LEILGSIING FALPLKEEHK 301 350 ENSP00000412324/1-555 IFLLKVLLPL HKVKSLSVYH PQLAYCVVQF LEKDSTLTEP ---------- bmy_18309T0/1-502 IFLLKVLLPL HKVKSLSVYH PQLAYCVVQF LEKDSTLTEP RGHLNEETED ENSBTAP00000026895/1-524 IFLLKVLLPL HKVKSLSVYH PQLAYCVVQF LEKDSTLTEP ---------- ENSTTRP00000004244/1-531 IFLLKVLLPL HKVKSLSVYH PQLAYCVVQF LEKDSTLTEP ---------- BACU007672/1-449 IFLLKVLLPL HKVKSLSVYH PQLAYCVVQF LEKDSTLTEP ---------- 351 400 ENSP00000412324/1-555 --------VV MALLKYWPKT HSPKEVMFLN ELEEILDVIE PSEFVKIMEP bmy_18309T0/1-502 VTLCVVSSVV MALLKYWPKT HSPKEVMFLN ELEEILDVIE PSEFVKIMEP ENSBTAP00000026895/1-524 --------VV MALLKYWPKT HSPKEVMFLN ELEEILDVIE PSEFVKIMEP ENSTTRP00000004244/1-531 --------VV MALLKYWPKT HSPKEVMFLN ELEEILDVIE PSEFVKIMEP BACU007672/1-449 --------VV MALLKYWPKT HSPKEVMFLN ELEEILDVIE PSEFVKIMEP 401 450 ENSP00000412324/1-555 LFRQLAKCVS SPHFQVAERA LYYWNNEYIM SLISDNAAKI LPIMFPSLYR bmy_18309T0/1-502 LFRQLAKCVS SPHFQVAERA LYYWNNEYIM SLISDNAAKI LPIMFPSLYR ENSBTAP00000026895/1-524 LFRQLAKCVS SPHFQVAERA LYYWNNEYIM SLISDNAAKI LPIMFPSLYR ENSTTRP00000004244/1-531 LFRQLAKCVS SPHFQVAERA LYYWNNEYIM SLISDNAAKI LPIMFPSLYR BACU007672/1-449 LFRQLAKCVS SPHFQVAERA LYYWNNEYIM SLISDNAAKI LPIMFPSLYR 451 500 ENSP00000412324/1-555 NSKTHWNKTI HGLIYNALKL FMEMNQKLFD DCTQQFKAEK LKEKLKMKER bmy_18309T0/1-502 NSKTHWN--- ---------- ---------- ---------- -KEKLKMKER ENSBTAP00000026895/1-524 NSKTHWNKTI HGLIYNALKL FMEMNQKLFD DCTQQFKAEK LKEKLKMKER ENSTTRP00000004244/1-531 NSKTHWNKTI HGLIYNALKL FMEMNQKLFD DCTQQFKAEK LKEKLKMKER BACU007672/1-449 NSKTHWNKTI HGLIYNALKL FMEMNQKLFD DCTQQFKAEK LKEKLKMKER 501 550 ENSP00000412324/1-555 EEAWVKIENL AKANPQYTVY SQASTMSIPV AMETDGPLFE DVQMLRKTVK bmy_18309T0/1-502 EEAWVKIENL AKANPQYAVC SQASTVSLPV AVETDGPLFE DVQMLRKTVN ENSBTAP00000026895/1-524 EEAWVKIENL AKANPQYAVY SQASTISIPV AMETDGPLFE DVQMLRKTVN ENSTTRP00000004244/1-531 EEAWVKIENL AKANP----- ---------- ---------- ---------- BACU007672/1-449 EEAWVKIENL AKANPQYAVC SQASAMSLPV AVETDGPLFE DVQMLRKTVN 551 600 ENSP00000412324/1-555 DEAHQAQKDP KKDRPLARRK SELPQDPHTK KALEAHCRAD ELASQDGR bmy_18309T0/1-502 EEARQAQKDL KKDRPLVRRK SELPQDLHTK SALEAHGRAE ELVPQDGR ENSBTAP00000026895/1-524 EEARQAQKDP KKERPLARRK SELPQDLHTK SALEAHGRAE EPAPQDGR ENSTTRP00000004244/1-531 ----QAQKDL KKDRPLVRRK SELPQDLHTK SALEAHGRAD ELVPQDGR BACU007672/1-449 EEARQAQKDL KKDRPLVRRK SELPQDLHTK SALEAHGRAE ELVPQDGR